Affinage

DPY19L2

Probable C-mannosyltransferase DPY19L2 · UniProt Q6NUT2

Length
758 aa
Mass
87.4 kDa
Annotated
2026-06-09
39 papers in source corpus 9 papers cited in narrative 9 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

DPY19L2 encodes a multi-pass transmembrane protein of the inner nuclear membrane of spermatids that is essential for acrosome biogenesis and sperm head morphogenesis (PMID:22764053). It localizes specifically to the region of the inner nuclear membrane facing the acrosomal vesicle, where it physically anchors the developing acrosome to the nucleus; in its absence the nuclear dense lamina is destabilized, the acroplaxome–nuclear envelope junction is lost, and acrosome and manchette attachment, vesicular trafficking, and nuclear shaping all fail, leading to elimination of the unbound acrosomal vesicle and globozoospermia (PMID:22764053). Its first identified in vivo partner is the small transmembrane protein FAM209, which co-localizes with DPY19L2 at the inner nuclear membrane and is itself required for acrosome biogenesis, with Fam209 loss phenocopying Dpy19l2 loss in mice (PMID:34471926). DPY19L2-dependent acrosome anchoring also constrains nuclear envelope organization, restricting SUN5 to envelope regions away from the acrosome, indicating that SUN complexes are not the attachment mechanism (PMID:25775128). Loss of DPY19L2 has broad downstream consequences for sperm nuclear maturation: defective nuclear lamina remodeling with retention of lamin B1 around the whole nuclear periphery and absence of BAF/BAF-L (PMID:28882431), altered three-dimensional chromatin architecture (PMID:30362053), abnormal histone-to-protamine exchange with failed protamine invasion and DNA breaks arising during spermiogenesis (PMID:25354700), and secondary loss of PLCζ that abolishes sperm-induced Ca2+ oscillations and oocyte activation (PMID:25354701). Loss-of-function and transmembrane-domain mutations in DPY19L2 cause globozoospermia and male infertility in patients (PMID:22627659).

Mechanistic history

Synthesis pass · year-by-year structured walk · 9 steps
  1. 2006 Low

    Before any function was known, the genomic origin of DPY19L2 was defined, establishing it as a relocated functional duplicate within a vertebrate transmembrane gene family while the ancestral locus carries only a pseudogene.

    Evidence comparative genomics and characterization of low-copy-repeat architecture across species

    PMID:16526957

    Open questions at the time
    • computational only, with no functional protein assay
    • does not establish protein localization or biological role
    • leaves the molecular activity of the protein entirely unknown
  2. 2012 High

    The central question of what physically connects the acrosome to the spermatid nucleus was answered by showing DPY19L2 is an inner nuclear membrane protein whose loss disrupts the acroplaxome–nuclear envelope junction and acrosome attachment.

    Evidence Dpy19l2 knockout mouse with immunolocalization, electron microscopy, and subcellular fractionation

    PMID:22764053

    Open questions at the time
    • the molecular partner mediating attachment on the acrosomal side was not identified
    • the biochemical activity of DPY19L2 itself remained undefined
    • how the protein is targeted to the acrosome-facing membrane region is unknown
  3. 2012 Medium

    Patient genetics established that structural/transmembrane integrity of DPY19L2 is required for its function, linking the gene causally to human globozoospermia.

    Evidence MLPA, Sanger sequencing, and in silico transmembrane-domain analysis of patient mutations

    PMID:22627659

    Open questions at the time
    • mutation effects on protein stability were predicted in silico, not validated biochemically
    • no structural model of the transmembrane domains
    • genotype–phenotype severity correlation not resolved
  4. 2014 High

    The link between DPY19L2 loss and fertilization failure was traced to secondary loss of PLCζ, explaining why globozoospermic sperm cannot activate oocytes.

    Evidence immunofluorescence of PLCζ in human and mouse sperm plus Ca2+ oscillation assays after ICSI

    PMID:25354701

    Open questions at the time
    • PLCζ loss is a downstream consequence of missing perinuclear structures, not a direct DPY19L2 interaction
    • does not address whether PLCζ delivery could be restored independently
  5. 2014 High

    DPY19L2 loss was shown to compromise chromatin maturation, revealing that nuclear anchoring is required for proper histone-to-protamine exchange and DNA integrity.

    Evidence Dpy19l2 knockout mouse with histone H4 acetylation, transition protein and protamine staining, TUNEL/comet DNA-integrity assays, and ICSI development

    PMID:25354700

    Open questions at the time
    • mechanistic link between membrane anchoring and protamine invasion not defined
    • whether DNA breaks are repairable is unresolved
  6. 2015 Medium

    By showing SUN5 relocalizes across the whole envelope only after acrosome detachment, the study excluded SUN complexes as the attachment mechanism and showed DPY19L2 anchoring spatially restricts SUN5.

    Evidence immunohistochemistry and Western blot in wild-type and Dpy19l2 knockout mice tracking SUN5 dynamics

    PMID:25775128

    Open questions at the time
    • single lab, two methods
    • does not identify the actual molecular bridge to the acrosome
    • no reciprocal interaction data between DPY19L2 and SUN5
  7. 2017 Medium

    DPY19L2 was shown to be required for nuclear lamina maturation, with lamin B1 polarization and BAF/BAF-L recruitment dependent on its presence.

    Evidence immunofluorescence of lamin B1, BAF, BAF-L and RT-PCR in DPY19L2-deleted patient and control sperm

    PMID:28882431

    Open questions at the time
    • correlative human material, no causal manipulation
    • the paradoxical retention of BAF transcripts is unexplained
    • direct interaction between DPY19L2 and lamina components not demonstrated
  8. 2018 Medium

    Quantitative 3D imaging extended DPY19L2's role to higher-order genome organization, showing altered chromocenters, telomere positioning, and chromosome territories in deficient sperm.

    Evidence 3D-FISH with confocal microscopy and quantitative image analysis in patient versus control sperm

    PMID:30362053

    Open questions at the time
    • single method, correlative human material
    • whether architectural changes are direct or secondary to lamina/compaction defects is unknown
  9. 2021 High

    The first in vivo molecular partner of DPY19L2 was identified, revealing FAM209 as a co-localizing transmembrane interactor whose loss phenocopies Dpy19l2 loss.

    Evidence FAM209 interactome mass spectrometry, immunofluorescence co-localization, and Fam209 knockout mouse phenotyping

    PMID:34471926

    Open questions at the time
    • the functional role of the DPY19L2–FAM209 complex in attachment is not mechanistically resolved
    • stoichiometry and additional complex members unknown
    • no structure of the complex

Open questions

Synthesis pass · forward-looking unresolved questions
  • The biochemical activity of DPY19L2 and the direct molecular bridge by which the inner nuclear membrane complex tethers the acrosome remain undefined.
  • no defined molecular/catalytic activity for DPY19L2
  • no structural model of the DPY19L2–FAM209 complex
  • the acrosome-side anchoring partner is unidentified

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Localization
GO:0005635 nuclear envelope 2
Pathway
R-HSA-1474165 Reproduction 3
Partners

Evidence

Reading pass · 9 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2012 DPY19L2 protein localizes specifically to the inner nuclear membrane of spermatids in the region facing the acrosomal vesicle. In Dpy19l2 knockout mice, absence of the protein destabilizes the nuclear dense lamina (NDL) and disrupts the junction between the acroplaxome and the nuclear envelope, causing failure of acrosome and manchette attachment to the nucleus, disruption of vesicular trafficking, failure of sperm nuclear shaping, and eventual elimination of the unbound acrosomal vesicle. DPY19L2 is thus the first protein demonstrated to link the acrosome to the nucleus. Dpy19l2 knockout mouse model; immunolocalization/immunofluorescence; electron microscopy; subcellular fractionation Development (Cambridge, England) High 22764053
2012 DPY19L2 is a transmembrane protein of the inner nuclear membrane; missense mutations affecting predicted transmembrane domains (e.g., p.M358K) are predicted to disrupt protein stability, and loss-of-function point mutations (nonsense p.Q342*, missense p.R290H) cause globozoospermia, confirming that the transmembrane/structural integrity of DPY19L2 is required for its function in acrosome biogenesis. MLPA; Sanger sequencing of 22 exons; in silico structural analysis of transmembrane domain mutations Human reproduction (Oxford, England) Medium 22627659
2014 In Dpy19l2 KO mice and DPY19L2-deleted human patients, PLCζ (phospholipase C zeta) is absent or markedly reduced in sperm. PLCζ normally localizes along the inner acrosomal membrane and in the perinuclear theca at the equatorial region; because these structures are absent in globozoospermic sperm (secondary to DPY19L2 loss), PLCζ is lost, preventing sperm-induced Ca2+ oscillations and resulting in oocyte activation failure. Immunofluorescence localization of PLCζ in control and DPY19L2-deficient human and mouse sperm; Ca2+ oscillation assays after ICSI with KO sperm; Western blot Molecular human reproduction High 25354701
2014 Dpy19l2 KO mouse sperm display defective chromatin compaction: the kinetics of histone H4 acetylation waves and transition proteins are abnormal, and protamine nuclear invasion fails, leading to poor chromatin compaction and sperm DNA integrity breakdown. DNA breaks are present before sperm reach the epididymis, indicating they occur during spermiogenesis inside the testis. Dpy19l2 KO mouse model; immunofluorescence for histone H4 acetylation and transition proteins; protamine staining; TUNEL/comet assay for DNA integrity; ICSI developmental assays Molecular human reproduction High 25354700
2015 Sun5 (Spag4l) does not face the acrosome and is not involved in acrosome-nucleus attachment. In Dpy19l2 KO spermatids, upon acrosome detachment, Sun5 relocalizes to the entire nuclear envelope, indicating that DPY19L2-mediated acrosome attachment normally excludes Sun5 from the nuclear envelope region facing the acrosome. This finding demonstrates that DPY19L2-dependent acrosome anchoring restricts Sun5 distribution and that SUN complexes are not the mechanism for acrosome attachment. Immunohistochemistry and Western blot in wild-type and Dpy19l2 KO mice; localization dynamics during spermatogenesis PloS one Medium 25775128
2017 Nuclear lamina maturation is defective in DPY19L2-deleted human globozoospermic spermatozoa: lamin B1 is retained at the whole nuclear periphery (instead of being polarized as in controls) and BAF/BAF-L proteins are absent, whereas BAF transcripts are paradoxically detected in globozoospermic but not control spermatozoa. This indicates that DPY19L2 is required for normal nuclear lamina remodeling and chromatin-partner protein localization during spermiogenesis. Immunofluorescence analysis of lamin B1, BAF, BAF-L in DPY19L2-deleted patient and control sperm; RT-PCR for spermatid transcripts Reproductive biomedicine online Medium 28882431
2021 FAM209 is a small transmembrane protein that physically associates with DPY19L2, identified as the first in vivo interacting partner of DPY19L2. FAM209 co-localizes with DPY19L2 at the inner nuclear membrane during spermatogenesis and is required for acrosome biogenesis; loss of Fam209 in mice produces globozoospermia, phenocopying Dpy19l2 loss. Proteomics/mass spectrometry of FAM209 interactome identifying DPY19L2; co-localization by immunofluorescence; Fam209 knockout mouse model with spermiogenesis phenotyping Journal of cell science High 34471926
2018 DPY19L2-deficient globozoospermic sperm display altered 3D genome organization: increased number of chromocenters, modified radial positions of telomeres (more central), and altered spatial organization of chromosome territories X, 7, and 18. This suggests DPY19L2 has a structural role in organizing nuclear chromatin architecture in sperm, possibly through interaction with the nuclear lamina. 3D-FISH combined with confocal laser scanning microscopy and 3D image analysis (IMARIS) on DPY19L2-deficient patient and control sperm Journal of assisted reproduction and genetics Medium 30362053
2006 DPY19L2 is a member of a novel transmembrane gene family (DPY19L) that expanded through low copy repeat-mediated duplication during vertebrate evolution. The current functional human DPY19L2 locus on chromosome 12 represents a relocated duplicate; the ancestral syntenic locus contains only a pseudogene (DPY19L2P1), establishing that the functional copy was repositioned within LCRs. Comparative genomics; characterization of LCR architecture; identification of pseudogene vs. functional gene at syntenic loci across species BMC genomics Low 16526957

Source papers

Stage 0 corpus · 39 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2011 A recurrent deletion of DPY19L2 causes infertility in man by blocking sperm head elongation and acrosome formation. American journal of human genetics 154 21397064
2011 DPY19L2 deletion as a major cause of globozoospermia. American journal of human genetics 152 21397063
2012 Absence of Dpy19l2, a new inner nuclear membrane protein, causes globozoospermia in mice by preventing the anchoring of the acrosome to the nucleus. Development (Cambridge, England) 145 22764053
2014 Subcellular localization of phospholipase Cζ in human sperm and its absence in DPY19L2-deficient sperm are consistent with its role in oocyte activation. Molecular human reproduction 75 25354701
2012 Globozoospermia is mainly due to DPY19L2 deletion via non-allelic homologous recombination involving two recombination hotspots. Human molecular genetics 75 22653751
2014 Dpy19l2-deficient globozoospermic sperm display altered genome packaging and DNA damage that compromises the initiation of embryo development. Molecular human reproduction 58 25354700
2013 Assisted oocyte activation overcomes fertilization failure in globozoospermic patients regardless of the DPY19L2 status. Human reproduction (Oxford, England) 56 23411621
2012 MLPA and sequence analysis of DPY19L2 reveals point mutations causing globozoospermia. Human reproduction (Oxford, England) 53 22627659
2017 Expression of sperm PLCζ and clinical outcomes of ICSI-AOA in men affected by globozoospermia due to DPY19L2 deletion. Reproductive biomedicine online 48 29339016
2013 DPY19L2 gene mutations are a major cause of globozoospermia: identification of three novel point mutations. Molecular human reproduction 42 23512994
2015 Dynamics of Sun5 localization during spermatogenesis in wild type and Dpy19l2 knock-out mice indicates that Sun5 is not involved in acrosome attachment to the nuclear envelope. PloS one 34 25775128
2019 Novel DPY19L2 variants in globozoospermic patients and the overcoming this male infertility. Asian journal of andrology 32 30333325
2015 Identification of a new DPY19L2 mutation and a better definition of DPY19L2 deletion breakpoints leading to globozoospermia. Molecular human reproduction 32 26516168
2020 Genetic analyses of a large cohort of infertile patients with globozoospermia, DPY19L2 still the main actor, GGN confirmed as a guest player. Human genetics 30 33108537
2006 Duplication and relocation of the functional DPY19L2 gene within low copy repeats. BMC genomics 27 16526957
2021 FAM209 associates with DPY19L2, and is required for sperm acrosome biogenesis and fertility in mice. Journal of cell science 26 34471926
2019 Fluoride exposure arrests the acrosome formation during spermatogenesis via down-regulated Zpbp1, Spaca1 and Dpy19l2 expression in rat testes. Chemosphere 21 31509916
2019 Proteomic Analysis of Dpy19l2-Deficient Human Globozoospermia Reveals Multiple Molecular Defects. Proteomics. Clinical applications 18 31424156
2013 Fine characterisation of a recombination hotspot at the DPY19L2 locus and resolution of the paradoxical excess of duplications over deletions in the general population. PLoS genetics 18 23555282
2013 A Homozygous Deletion of the DPY19l2 Gene is a Cause of Globozoospermia in Men from the Republic of Macedonia. Balkan journal of medical genetics : BJMG 18 24265589
2016 Assessment of DPY19L2 Deletion in Familial and Non-Familial Individuals with Globozoospermia and DPY19L2 Genotyping. International journal of fertility & sterility 14 27441053
2019 Comparison of sperm morphology and nuclear sperm quality in SPATA16- and DPY19L2-mutated globozoospermic patients. Andrologia 13 30912172
2018 Altered three-dimensional organization of sperm genome in DPY19L2-deficient globozoospermic patients. Journal of assisted reproduction and genetics 11 30362053
2017 Abnormal retention of nuclear lamina and disorganization of chromatin-related proteins in spermatozoa from DPY19L2-deleted globozoospermic patients. Reproductive biomedicine online 9 28882431
2020 Identification of a novel deletion mutation in DPY19L2 from an infertile patient with globozoospermia: a case report. Molecular cytogenetics 8 32582379
2021 Molecular Analysis of DPY19L2, PICK1 and SPATA16 in Italian Unrelated Globozoospermic Men. Life (Basel, Switzerland) 7 34209343
2018 Embryos derived from couples with consanguineous marriages with globozoospermia should be screened for gender or DPY19L2 deletion. Andrologia 7 30584989
2019 The testis-specific expressed gene Spata34 is not required for fertility in mice. Molecular biology reports 6 31621016
2020 Deletion of dpy-19 like 2 (DPY19L2) gene is associated with total but not partial globozoospermia. Reproduction, fertility, and development 5 32312381
2022 Genome-wide compound heterozygote analysis highlights DPY19L2 alleles in a non-consanguineous Spanish family with total globozoospermia. Reproductive biomedicine online 4 35610156
2014 Expression and identification of a novel gene Spata34 in mouse spermatogenic cells. Molecular biology reports 4 24435972
2020 [Analysis of (DPY19L2 gene variant in two brothers affected with globozoospermia]. Zhonghua yi xue yi chuan xue za zhi = Zhonghua yixue yichuanxue zazhi = Chinese journal of medical genetics 3 32219831
2013 [Detection of DPY19L2 gene mutation in a globozoospermia patient]. Zhonghua nan ke xue = National journal of andrology 2 24341097
2013 Comparative testicular transcriptome of wild type and globozoospermic Dpy19l2 knock out mice. Basic and clinical andrology 2 25780569
2020 Corrigendum to: Deletion of dpy-19 like 2 (DPY19L2) gene is associated with total but not partial globozoospermia. Reproduction, fertility, and development 1 32389181
2020 [Detection of DPY19L2 gene mutation in 2 cases of globozoospermia]. Zhonghua nan ke xue = National journal of andrology 1 33377718
2018 Role of Spata34 in cell proliferation and its expression pattern in postnatal development of rat testis. Molecular biology reports 1 30341690
2021 Molecular Mechanism and Anti-Fertility Effect of Plant Complex Sterility Agent on Targeted Gene DPY19L2 in Rats. Clinical laboratory 0 33491431
2012 [DPY19L2 gene and globozoospermia: an update]. Zhonghua nan ke xue = National journal of andrology 0 23214256

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