Affinage

DNAJB13

DnaJ homolog subfamily B member 13 · UniProt P59910

Length
316 aa
Mass
36.1 kDa
Annotated
2026-06-09
10 papers in source corpus 8 papers cited in narrative 8 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 3/3 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

DNAJB13 is an HSP40/DnaJ-family co-chaperone that functions as a structural component of the radial spokes of the '9+2' axoneme in motile cilia and sperm flagella, where it is required for central complex stability and axonemal integrity (PMID:19919626, PMID:27486783). It is an axoneme-associated protein distributed along the entire sperm flagellum and present in motile cilia of trachea and oviduct, with constitutive (non-heat-shock-induced) expression (PMID:18247331, PMID:19919626). Loss-of-function mutations destabilize the protein and trigger its proteasomal degradation, producing absence of DNAJB13 from cilia and sperm axonemes, central complex defects, primary ciliary dyskinesia, and male infertility spanning asthenozoospermia and teratozoospermia (PMID:27486783, PMID:31342671, PMID:35166991). Within the axoneme it sits in a radial spoke head protein network: it physically interacts with DNAH12, an inner dynein arm component whose loss disrupts central pair stability in a manner involving DNAJB13 together with RSPH1 and RSPH9 [PMID:bio_10.1101_2024.06.20.599934]. The biochemical chaperone activity predicted from its conserved J domain has not been experimentally demonstrated in the available corpus, and its reported interaction with the glycolytic enzyme HK1 rests on a single pull-down (PMID:14970903, PMID:27998865).

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 2004 Low

    Established the molecular identity of DNAJB13 by placing it in the HSP40/DnaJ family via a conserved J domain, framing it as a candidate HSP70 co-chaperone.

    Evidence Molecular cloning, sequence analysis, RT-PCR and Northern blot of TSARG6

    PMID:14970903

    Open questions at the time
    • Sequence-based inference only — no biochemical assay of J-domain function or HSP70 binding
    • No subcellular or tissue localization established
    • No functional phenotype linked
  2. 2008 Medium

    Resolved where DNAJB13 acts by showing it is an axoneme-associated component of the sperm flagellum rather than a heat-inducible stress chaperone.

    Evidence Western blot, immunohistochemistry and fractionation of SDS-resistant sperm tail structures in mouse

    PMID:18247331

    Open questions at the time
    • Did not resolve the specific axonemal substructure
    • No mechanistic role demonstrated
    • Single lab
  3. 2010 High

    Pinpointed DNAJB13 to the radial spokes of the '9+2' axoneme, defining its precise structural position in both flagella and motile cilia.

    Evidence Immunoelectron microscopy of mouse sperm flagella and immunohistochemistry of trachea and oviduct

    PMID:19919626

    Open questions at the time
    • Did not define radial spoke binding partners
    • No functional consequence of localization tested
    • Single lab
  4. 2016 High

    Established DNAJB13 as causative for human disease by showing loss-of-function mutations destabilize the protein, drive its proteasomal degradation, and produce central complex defects and PCD.

    Evidence In vitro mutant expression and proteasome inhibition, whole-exome sequencing, transcript analysis, and immunofluorescence of patient cilia/sperm across two families

    PMID:27486783

    Open questions at the time
    • Molecular mechanism by which DNAJB13 loss causes central complex collapse not defined
    • Chaperone client proteins not identified
    • No structural model of DNAJB13 in the spoke
  5. 2016 Low

    Probed a possible metabolic role by detecting an interaction between DNAJB13 and the glycolytic enzyme HK1 in testis.

    Evidence GST pull-down with recombinant DNAJB13 against mouse testis lysate, Western blot detection of HK1

    PMID:27998865

    Open questions at the time
    • Single pull-down without reciprocal Co-IP or in vivo validation
    • Functional consequence for motility untested
    • Whether interaction reflects chaperone-client relationship unknown
  6. 2019 Medium

    Extended the disease spectrum and began mapping the sperm interactome, linking a missense allele to reduced DNAJB13 levels, tail ultrastructural defects, and immotile sperm in asthenozoospermia.

    Evidence Co-IP/mass spectrometry interactome, MRM protein quantification, TEM and immuno-EM of patient sperm

    PMID:31342671

    Open questions at the time
    • Interactome partners not individually validated
    • Genotype-phenotype mechanism for heterozygous allele not resolved
    • Single lab
  7. 2022 Medium

    Confirmed loss of DNAJB13 expression as a cause of teratozoospermia with respiratory disease and clarified its developmental expression during spermiogenesis.

    Evidence Whole-exome sequencing, Western blot showing protein absence, immunofluorescence, and TEM in human and mouse

    PMID:35166991

    Open questions at the time
    • Does not explain variable phenotype across alleles
    • No molecular pathway from DNAJB13 loss to flagellar malformation
    • Single lab
  8. 2024 Medium

    Positioned DNAJB13 within a radial spoke head network by showing it physically interacts with the inner dynein arm component DNAH12 and participates with RSPH1/RSPH9 in central pair stability.

    Evidence Co-IP, Dnah12 knockout and mutant mouse models, TEM and immunofluorescence (preprint)

    PMID:bio_10.1101_2024.06.20.599934

    Open questions at the time
    • Preprint, not yet peer-reviewed
    • Directness and stoichiometry of DNAJB13-DNAH12 interaction not resolved
    • Whether DNAJB13 acts as chaperone for these partners untested

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether DNAJB13 exerts a bona fide HSP40 chaperone activity — and what its client proteins are within the radial spoke — remains unresolved.
  • No demonstrated HSP70 partnership or J-domain-dependent folding activity
  • No identified chaperone clients among axonemal proteins
  • No structural model of DNAJB13 within the radial spoke

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005198 structural molecule activity 2 GO:0044183 protein folding chaperone 1
Localization
GO:0005856 cytoskeleton 2 GO:0005929 cilium 2 GO:0005829 cytosol 1
Pathway
R-HSA-1474244 Extracellular matrix organization 1
Complex memberships
radial spoke

Evidence

Reading pass · 8 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2004 DNAJB13 (then called TSARG6) encodes a protein containing a conserved J domain, placing it in the HSP40/DnaJ family; the J domain is critical for DnaJ-DnaK (HSP40-HSP70) protein-protein interactions, establishing DNAJB13 as an HSP40 co-chaperone. Molecular cloning, sequence analysis, RT-PCR, Northern blot Acta biochimica et biophysica Sinica Low 14970903
2008 DNAJB13 is localized to the axoneme of mouse sperm flagella. It is present along the entire flagellum but absent from SDS-resistant tail structures lacking the axoneme, establishing it as an axoneme-associated component. Expression is constitutive and not heat-shock-induced. Western blot, immunohistochemistry, subcellular fractionation of sperm tail structures with specific antibody Molecular reproduction and development Medium 18247331
2010 DNAJB13 localizes specifically to the radial spokes of the mouse '9+2' axoneme in sperm flagella, and is also present in motile cilia of trachea and oviduct. Immunoelectron microscopy of mouse sperm flagella; immunohistochemistry on trachea and oviduct sections Reproduction in domestic animals High 19919626
2016 A missense mutation (p.Met278Arg) in DNAJB13 causes protein instability and proteasomal degradation, resulting in absence of DNAJB13 from cilia and sperm axonemes and leading to central complex (CC) defects and PCD. A second splice-site mutation (c.68+1G>C) causes a splicing defect and loss-of-function. These findings establish DNAJB13 as essential for proper formation and function of the ciliary/flagellar axoneme central complex in humans. In vitro expression studies of mutant protein, proteasome inhibition assays, whole-exome sequencing, SNP genotyping, transcript analysis from airway cells, immunofluorescence of patient cilia and sperm American journal of human genetics High 27486783
2016 DNAJB13 physically interacts with hexokinase 1 (HK1) in mouse testis, suggesting a role in regulating sperm motility through interaction with a glycolytic enzyme. GST pull-down assay using recombinant GST-DNAJB13 fusion protein with mouse testis lysate, followed by Western blot detection of HK1 Nan fang yi ke da xue xue bao (Journal of Southern Medical University) Low 27998865
2019 A heterozygous missense mutation (c.106T>C) in DNAJB13 reduces DNAJB13 protein levels and is associated with sperm tail ultrastructural defects and immotile spermatozoa in asthenozoospermia patients. Co-immunoprecipitation and mass spectrometry identified DNAJB13-interacting partners in sperm. Co-immunoprecipitation, mass spectrometric detection, immunoelectron microscopy, transmission electron microscopy, multiple reaction monitoring (MRM) for protein quantification, indirect immunofluorescence Andrology Medium 31342671
2022 A homozygous frameshift mutation (c.335_336del, p.E112Vfs*3) in DNAJB13 abolishes DNAJB13 protein expression in spermatozoa and causes sperm ultrastructural defects and teratozoospermia with recurrent respiratory infections. DNAJB13 is expressed in the cytoplasm of primary germ cells and in flagella of spermatids during human and mouse spermiogenesis. Whole-exome sequencing, immunofluorescence staining, Western blotting, transmission electron microscopy Journal of assisted reproduction and genetics Medium 35166991
2024 DNAJB13 physically interacts with DNAH12, a special inner dynein arm component. DNAH12 deficiency disrupts recruitment of DNALI1 and DNAH1 to inner dynein arms and impairs central pair stability in a manner that involves DNAJB13 (along with RSPH1 and RSPH9), placing DNAJB13 within the radial spoke head protein network that regulates central pair stability. Co-immunoprecipitation (interaction between DNAH12 and DNAJB13/RSPH1/RSPH9 demonstrated), mouse knockout models (Dnah12−/− and Dnah12mut/mut), TEM, immunofluorescence bioRxiv (preprint)preprint Medium bio_10.1101_2024.06.20.599934

Source papers

Stage 0 corpus · 10 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2016 Mutations in DNAJB13, Encoding an HSP40 Family Member, Cause Primary Ciliary Dyskinesia and Male Infertility. American journal of human genetics 77 27486783
2008 A heat-shock protein 40, DNAJB13, is an axoneme-associated component in mouse spermatozoa. Molecular reproduction and development 30 18247331
2019 Missense mutation in DNAJB13 gene correlated with male fertility in asthenozoospermia. Andrology 22 31342671
2014 DNAJB13, a type II HSP40 family member, localizes to the spermatids and spermatozoa during mouse spermatogenesis. BMC developmental biology 20 25233908
2010 DNAJB13 is a radial spoke protein of mouse '9+2' axoneme. Reproduction in domestic animals = Zuchthygiene 20 19919626
2004 Molecular cloning of TSARG6 gene related to apoptosis in human spermatogenic cells. Acta biochimica et biophysica Sinica 15 14970903
2022 A novel homozygous mutation in DNAJB13-a gene associated with the sperm axoneme-leads to teratozoospermia. Journal of assisted reproduction and genetics 11 35166991
2020 [Expression of Dnajb13 and its involvement in the apoptosis of spermatogenic cells in the testis of the mouse with cryptorchidism]. Zhonghua nan ke xue = National journal of andrology 1 33346962
2016 [Interaction of DNAJB13 with HK1 in mouse]. Nan fang yi ke da xue xue bao = Journal of Southern Medical University 1 27998865
2025 DNAJB13 polymorphisms and association with idiopathic asthenozoospermia in Sichuan, China. Basic and clinical andrology 0 41413469

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