| 2013 |
DIS3L2 is the 3'-5' exonuclease responsible for the decay of uridylated pre-let-7 in mouse embryonic stem cells. Biochemical reconstitution assays demonstrated that 3' oligouridylation stimulates Dis3l2 activity in vitro, and knockdown of Dis3l2 in mouse embryonic stem cells leads to stabilization of pre-let-7. |
Biochemical reconstitution in vitro assay, siRNA knockdown in mouse embryonic stem cells, RNA stability assays |
Nature |
High |
23594738
|
| 2012 |
DIS3L2 has exoribonuclease activity and a different intracellular localization from DIS3 and DIS3L1; it lacks the PIN domain. DIS3L2 inactivation was associated with mitotic abnormalities and altered expression of mitotic checkpoint proteins. |
In vitro exonuclease activity assay, siRNA knockdown with cell biological readout (mitotic abnormalities), subcellular localization by fractionation/imaging |
Nature genetics |
High |
22306653
|
| 2013 |
In S. pombe, Dis3L2 defines a novel cytoplasmic 3'-5' RNA degradation pathway independent of the exosome. Dis3L2 does not interact with exosome components, localizes in the cytoplasm and in cytoplasmic foci docked to P-bodies, shows preference for uridylated substrates in vitro, and synthetic lethality with xrn1Δ indicates it provides an alternative mRNA degradation route. |
Co-immunoprecipitation (non-interaction with exosome), subcellular localization by microscopy, in vitro exonuclease assay with uridylated substrates, genetic epistasis (synthetic lethality with xrn1Δ and lsm1Δ), mRNA stability assays |
The EMBO journal |
High |
23503588
|
| 2013 |
DIS3L2 is an oligo(U)-binding and processing exoribonuclease that specifically targets uridylated pre-let-7 in vivo, establishing it as the missing component of the LIN28-TUT4/7-DIS3L2 pathway for let-7 repression in pluripotent cells. |
RNA immunoprecipitation, in vivo knockdown with pre-let-7 stability assays, biochemical binding assays |
RNA (New York, N.Y.) |
High |
24141620
|
| 2014 |
Crystal structure of mouse Dis3l2 in complex with oligoU RNA revealed that three RNA-binding domains (two CSDs and an S1 domain) form an open funnel on one face of the catalytic domain, creating a path to the active site distinct from the exosome. Three U-specificity zones spanning the first 12 nucleotides explain how Dis3l2 recognizes and processes uridylated pre-let-7. |
X-ray crystallography of Dis3l2-oligoU RNA complex, structure-function mutagenesis |
Nature |
High |
25119025
|
| 2015 |
During apoptosis, 3' truncated mRNA decay intermediates with nontemplated uridylate-rich tails are generated by TUTases ZCCHC6/ZCCHC11 and are degraded by DIS3L2. Knockdown of DIS3L2 or TUTases inhibits apoptotic mRNA decay, translation arrest, and cell death, whereas DIS3L2 overexpression enhances cell death. |
siRNA knockdown of DIS3L2 and TUTases with apoptotic phenotype readout, 3'-end sequencing to detect uridylated intermediates, overexpression assays |
Cell reports |
High |
25959823
|
| 2016 |
DIS3L2 degrades a broad spectrum of uridylated cytoplasmic structured noncoding RNAs (rRNAs, snRNAs, snoRNAs, tRNAs, vault RNAs, 7SL, Y RNAs) identified by in vivo CLIP. Most substrates have aberrant processing and stable secondary structures, establishing TUT-DIS3L2 as a cytoplasmic quality control pathway for structured ncRNAs. |
In vivo CLIP (cross-linking and immunoprecipitation), DIS3L2 depletion with RNA stabilization assays |
The EMBO journal |
High |
27647875
|
| 2016 |
Dis3l2-mediated decay (DMD) targets uridylated ncRNAs including lncRNA Rmrp, 7SL, and snRNAs in mouse embryonic stem cells. TUTases Zcchc6/11 uridylate these substrates, and biochemical reconstitution assays demonstrate TUTase-Dis3l2 sufficiency for Rmrp decay. |
RNA immunoprecipitation, deep sequencing of 3' ends, siRNA knockdown, biochemical reconstitution assay |
Cell reports |
High |
27498873
|
| 2016 |
DIS3L2 in human cells contributes to surveillance of maturing snRNAs during cytoplasmic processing. All novel DIS3L2 substrates (including vault RNAs, Y RNAs, BC200 RNA, snRNAs) are uridylated in vivo by TUT4/TUT7, and uridylation-dependent DIS3L2-mediated decay can be recapitulated in vitro. |
Global transcriptomics, 3' RACE-Seq, in vitro reconstitution assay, DIS3L2 depletion |
Nucleic acids research |
High |
27431325
|
| 2016 |
Knockdown of dis3L2 in Drosophila wing imaginal discs results in wing overgrowth due to increased cellular proliferation. A compensatory relationship between Dis3L2 and 5'-3' exoribonuclease Pacman was demonstrated, indicating they regulate opposing degradation pathways. |
RNAi knockdown in Drosophila tissue, RNA-seq, genetic epistasis with Pacman/Xrn1 |
RNA biology |
Medium |
27630034
|
| 2015 |
Crystal structure of S. pombe Dis3l2 (SpDis3l2) was solved at 2.8 Å. Fluorescence polarization assays showed RNB and S1 domains are primary RNA-binding domains, and CSD1/CSD2 play an indispensable role in RNA binding. The conformation differs from the mouse Dis3l2-RNA complex, suggesting a conformational change upon substrate binding. |
X-ray crystallography, fluorescence polarization binding assays, mutagenesis of RNA-binding domains |
Acta crystallographica. Section D, Biological crystallography |
High |
26057668
|
| 2019 |
DIS3L2 directly interacted with hnRNP U through its cold-shock domains and promoted inclusion of exon 3b during splicing of pre-Rac1, independent of its exonuclease activity, yielding oncogenic Rac1b variant. DIS3L2 regulated alternative splicing by recruiting hnRNP U to pre-Rac1. |
Co-immunoprecipitation, splicing assays, domain mapping, in vitro and in vivo functional assays |
Cancer research |
Medium |
31331910
|
| 2018 |
DIS3L2 loss in mouse nephron progenitor cells has no effect on mature let-7 levels but results in up-regulation of Igf2, a growth-promoting gene strongly associated with Wilms tumorigenesis, identifying a let-7-independent mechanism for DIS3L2-mediated tumor suppression. |
Dis3l2-null cell lines and mouse models, qRT-PCR for mature let-7 levels (negative finding for let-7), RNA-seq of nephron progenitor cells |
Genes & development |
Medium |
29950491
|
| 2019 |
DIS3L2 regulates the levels of a subset of NMD-targeted mRNAs in human cells, acting over full-length transcripts through a process involving UPF1. DIS3L2-mediated decay of NMD targets is dependent on the activity of TUTases Zcchc6/11 (TUT7/4). |
siRNA knockdown of DIS3L2 and UPF1, Northern blot, RT-qPCR, reporter assays |
Biochemical and biophysical research communications |
Medium |
31466720
|
| 2020 |
AGO mutations disrupting miRNA 3' binding trigger extensive miRNA 3' uridylation by TUT7 (more robustly than TUT4), which leads to degradation of AGO-associated mature miRNAs by DIS3L2, revealing a decay machinery targeting AGO-associated miRNAs with an exposed 3' end. |
Genetic KO of TUT4, TUT7, and DIS3L2 in HEK293T cells, deep sequencing, AGO mutant analysis |
Nature communications |
High |
32488030
|
| 2020 |
DIS3L2-mediated decay (DMD) functions in the quality control of the 7SL ncRNA component of the signal recognition particle (SRP). Upon DIS3L2 loss, sustained 3'-end uridylation of aberrant 7SL RNA impairs ER-targeted translation and causes ER calcium leakage, activating calcium signaling response genes and perturbing ESC differentiation. |
Ribosome profiling (Ribo-seq), DIS3L2 KO in ESCs, calcium imaging, transcriptomics, functional differentiation assays |
Nature communications |
High |
32457326
|
| 2020 |
Dis3L2 loss results in upregulation of the PI3-Kinase/AKT signaling pathway in human HEK-293T cells, and this pathway contributes to the proliferation phenotype caused by DIS3L2 loss both in human cells and in Drosophila. |
DIS3L2 KO in human cells plus Drosophila null mutant; Western blot for AKT pathway; epistasis with PI3K/AKT inhibitors in Drosophila |
PLoS genetics |
Medium |
33370287
|
| 2020 |
Sm ring-deficient snRNAs accumulate in P-bodies in an LSm1-dependent manner, are uridylated at the 3' end, and associate with DIS3L2. Inhibition of XRN1 increases association of defective snRNAs with DIS3L2, indicating competition and compensation between DIS3L2 and XRN1 in degradation of aberrant snRNAs. |
Co-immunoprecipitation, fluorescence microscopy (P-body localization), 3' end sequencing, XRN1 inhibition epistasis |
Nucleic acids research |
Medium |
32374871
|
| 2023 |
DIS3L2 ribonuclease is required for degradation of uridylated-poly(A) mRNAs during oocyte maturation in mice. Oocyte-specific Dis3l2 knockout causes arrest at the germinal vesicle stage, female infertility, and accumulation of uridylated-poly(A) RNAs with shorter poly(A) tails and decreased translation. |
Conditional KO mouse model (Dis3l2cKO), single-oocyte long-read PacBio RNA sequencing, transcriptome profiling |
Nucleic acids research |
High |
36727488
|
| 2025 |
Crystal structure of SpDis3l2 bound to U13 RNA in a vase-like conformation accommodating 6 nucleotides. The A756R variant loses the ability to degrade double-stranded RNA substrates and accumulates intermediate products on single-stranded RNA, identifying A756 as a key residue for degradation of structured RNA substrates. |
X-ray crystallography, in vitro biochemical assays with disease-mimicking point mutants |
RNA (New York, N.Y.) |
High |
41033841
|
| 2024 |
Conditional ablation of Dis3l2 in pre-meiotic germ cells impairs spermatogonial differentiation and hinders spermatocyte meiotic progression coupled with apoptosis, causing defective spermatogenesis and male infertility, associated with disrupted RNA metabolism and downregulation of cell cycle and meiotic genes. |
Conditional KO mouse model (Stra8-Cre), bulk RNA-seq, scRNA-seq |
Theranostics |
Medium |
39310107
|
| 2025 |
DIS3L2 surveillance and EV packaging of uridylated aberrant ncRNAs are competing pathways; DIS3L2 depletion increases EV release and fractions of tailed RNAs in EVs, and upregulates type I interferon-stimulated genes (ISGs), indicating DIS3L2-mediated decay prevents innate immune activation by aberrant cellular RNAs. |
DIS3L2 depletion, EV purification and high-throughput RNA sequencing, Northern blotting, ISG expression analysis |
Proceedings of the National Academy of Sciences of the United States of America |
Medium |
41401009
|
| 2025 |
In the ZAP-mediated RNA decay (ZMD) pathway, ZAP and TRIM25 recruit DIS3L2 along with TUT4/TUT7 and other enzymes; after KHNYN endonucleolytic cleavage, the 5' cleavage fragment undergoes TUT4/TUT7-mediated 3' uridylation and is then degraded by DIS3L2. |
Co-immunoprecipitation (RNase-resistant interactions), KO cell lines, RNA decay assays |
bioRxivpreprint |
Medium |
|
| 2025 |
DIS3L2 was identified as the first i6A (N6-isopentenyladenosine) reader protein. i6A modification in mRNA CDS regions of ER-bound transcripts promotes their decay via DIS3L2, identifying i6A as a new mRNA modification that regulates gene expression through DIS3L2-mediated mRNA decay. |
i6A-seq transcriptome mapping, TRIT1 manipulation, DIS3L2 KD/KO with mRNA stability assays |
bioRxivpreprint |
Low |
|
| 2025 |
In zebrafish embryos, dis3l2 regulates neural crest specification and survival through the Akt-GSK3β signaling pathway. dis3l2 morphants show reduced neural crest specifier gene expression and extensive apoptosis in neural tissue. Dis3l2 is also essential for early mitoses, maintaining spindle length, chromosome congression, spindle pole integrity, and cytokinesis. |
Morpholino knockdown in zebrafish, immunofluorescence for mitotic markers, gene expression analysis |
Cell communication and signaling : CCS |
Medium |
40500755
|
| 2025 |
hnRNPR protects XB130 mRNA from DIS3L2-mediated degradation by binding to specific regions within the XB130 3'UTR, indicating that DIS3L2 can be antagonized by RNA-binding proteins through 3'UTR competition. |
RNA pull-down, RNA immunoprecipitation, mRNA stability assays, dual-luciferase reporter assay |
Cellular signalling |
Low |
40268079
|