Affinage

DCHS2

Protocadherin-23 · UniProt Q6V1P9

Length
3371 aa
Mass
370.2 kDa
Annotated
2026-06-09
26 papers in source corpus 8 papers cited in narrative 8 extracted findings
Cross-family judge faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

DCHS2 is a member of the cadherin superfamily that acts as an atypical cadherin ligand for FAT-family cadherins to control planar tissue organization, growth, and cytoskeletal architecture across multiple developing organs (PMID:26116661, PMID:25340762, PMID:15003449). In the kidney, DCHS2 functions partially redundantly with DCHS1 and is bound by stromal FAT4 to restrict nephron progenitor self-renewal, acting independently of YAP in this context (PMID:26116661). During zebrafish craniofacial development, Dchs2 partners with Fat3 to drive polarized cell-cell intercalation and chondrocyte stacking, with its loss disrupting sox9a regulation (PMID:25340762). Beyond ligand functions, DCHS2 regulates the actin and microtubule cytoskeleton: loss causes bundled actin and microtubule networks and defective cortical granule exocytosis and cytoplasmic segregation, and its intracellular domain alone rescues microtubule bundling, defining a Fat-ligand-independent cytoskeletal role (PMID:26160902, PMID:40463075). In the heart, DCHS2 acts as a downstream effector of the lncRNA lncExACT1 through Hippo/YAP1 signaling to balance physiological versus pathological hypertrophy and cardiomyogenesis (PMID:35114812). DCHS2 is also required for normal hypothalamic-pituitary development, with mouse knockouts showing anterior pituitary hypoplasia (PMID:33108146).

Mechanistic history

Synthesis pass · year-by-year structured walk · 8 steps
  1. 2004 Low

    Established DCHS2 as a distinct human cadherin superfamily gene, defining the molecular entity before any functional role was known.

    Evidence Protein motif search with gene-finding, PCR-based exon-intron verification, and tissue expression profiling (identified as CDH-J/PCDH-J)

    PMID:15003449

    Open questions at the time
    • Gene identification only, no functional assay
    • No interaction partners or pathway placement defined
    • No localization data
  2. 2014 High

    Identified Dchs2 as a Fat3 ligand directing polarized chondrocyte intercalation, linking DCHS2 to planar cell polarity in craniofacial morphogenesis.

    Evidence Zebrafish dchs2 loss-of-function mutants, Fat3 binding assays, chimaeric analyses, and in vivo imaging of chondrocyte stacking

    PMID:25340762

    Open questions at the time
    • Mechanism connecting Fat3-Dchs2 binding to sox9a regulation not resolved
    • REREa interaction defined for Fat3, not directly for Dchs2 intracellular signaling
    • Mammalian conservation of this craniofacial role not tested here
  3. 2014 Low

    Found recurrent DCHS2 frameshift mutations in MSI-H gastric and colorectal cancers, raising the possibility of cell-adhesion inactivation in tumorigenesis.

    Evidence SSCP and DNA sequencing of 89 gastric and 131 colorectal cancers stratified by MSI status

    PMID:24898286

    Open questions at the time
    • No functional validation that mutations inactivate DCHS2
    • Likely passenger versus driver status unresolved in MSI-H context
    • No phenotypic consequence demonstrated
  4. 2015 High

    Demonstrated that DCHS2 acts redundantly with DCHS1 as a FAT4 ligand to restrict nephron progenitor self-renewal, and that this growth control is YAP-independent.

    Evidence Tissue-specific conditional deletions in mice, Six2/Fat4 double-mutant epistasis, electron microscopy, and gene expression analysis

    PMID:26116661

    Open questions at the time
    • Molecular signal downstream of FAT4-DCHS binding in progenitors unknown
    • Relative contribution of DCHS2 versus DCHS1 not separated
    • How a YAP-independent output is transduced not defined
  5. 2015 High

    Revealed a Fat-ligand-independent function of DCHS2 in cytoskeletal organization, showing the intracellular domain alone suffices to control microtubule bundling.

    Evidence Maternal-zygotic dchs1b and dchs2 zebrafish mutants, live imaging, pharmacological phenocopy, and full-length versus intracellular-domain rescue constructs

    PMID:26160902

    Open questions at the time
    • Intracellular effectors mediating microtubule/actin regulation not identified
    • Link between cytoskeletal defect and Nodal signaling not mechanistically resolved
    • Distinct contribution of dchs2 versus dchs1b not separated
  6. 2020 Medium

    Placed DCHS2 in hypothalamic-pituitary morphogenesis, showing knockout mice develop anterior pituitary hypoplasia despite normal cell-type commitment.

    Evidence Dchs2-/- mouse histological phenotyping, human pituitary expression analysis, and PSIS patient variant screening

    PMID:33108146

    Open questions at the time
    • Mechanism of hypoplasia (proliferation versus morphogenesis) not defined
    • FAT partner mediating pituitary role not established
    • Human variant causality not demonstrated
  7. 2022 High

    Identified DCHS2 as a lncExACT1 downstream effector acting through Hippo/YAP1 to balance cardiac hypertrophy type and regeneration, extending its growth-control role to the heart.

    Evidence Zebrafish transgenic DCHS2 overexpression, cardiac-specific Cas9 knockin deletion in mice, AAV lncExACT1 manipulation, and promoter/binding assays

    PMID:35114812

    Open questions at the time
    • Direct molecular link from DCHS2 to YAP1 activation in cardiomyocytes not detailed
    • Whether cardiac role requires a FAT ligand unknown
    • Reconciliation with YAP-independent kidney function unresolved
  8. 2025 Medium

    Defined a downstream effector of DCHS-family cytoskeletal regulation by placing dchs1b upstream of the intracellular-domain-binding protein ttc28 in microtubule control during epiboly, with dchs2 contributing redundantly.

    Evidence dchs triple loss-of-function zebrafish mutants, endogenous Dchs1b-GFP knock-in imaging, and dchs1b;ttc28 epistasis (preprint)

    PMID:40463075

    Open questions at the time
    • Preprint not yet peer-reviewed
    • Direct DCHS2-TTC28 interaction not demonstrated (shown for Dchs1b)
    • How DCHS2 intracellular domain engages the microtubule machinery mechanistically unresolved

Open questions

Synthesis pass · forward-looking unresolved questions
  • How DCHS2 ligand-dependent FAT signaling and its ligand-independent intracellular cytoskeletal output are integrated within a single tissue remains unresolved.
  • No structural model of DCHS2-FAT or DCHS2-effector binding
  • Direct cytoskeletal effectors of the DCHS2 intracellular domain unidentified
  • Mechanism reconciling YAP-dependent (cardiac) and YAP-independent (renal) growth control not established

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0008092 cytoskeletal protein binding 2 GO:0098631 cell adhesion mediator activity 2
Localization
GO:0005886 plasma membrane 2
Pathway
R-HSA-1266738 Developmental Biology 3 R-HSA-162582 Signal Transduction 1

Evidence

Reading pass · 8 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2015 DCHS2 (Dchs2) functions in a partially redundant fashion with DCHS1 (Dchs1) to restrict nephron progenitor self-renewal in the kidney; FAT4 in the renal stroma binds DCHS1/2 in the condensing mesenchyme to limit progenitor pool expansion, acting independently of YAP. Tissue-specific conditional deletions in mice (Fat4-null, Dchs1/Dchs2 mutants), Six2-/-;Fat4-/- double mutants for epistasis, electron microscopy for cell organisation, gene expression analysis Development (Cambridge, England) High 26116661
2014 In zebrafish, Fat3 binds Dchs2 and together with REREa controls polarized cell-cell intercalation of cartilage precursors and chondrocyte stacking during craniofacial development; loss of Dchs2 causes failure of chondrocyte stacking and misregulation of sox9a expression. Zebrafish dchs2 loss-of-function mutants, Fat3 binding to REREa by binding assay, chimaeric analyses, in vivo imaging of chondrocyte stacking PLoS genetics High 25340762
2015 Zebrafish dchs2 (along with dchs1b) regulates actin and microtubule cytoskeleton organisation; loss of dchs1b/dchs2 causes bundled actin and microtubule networks, defects in cortical granule exocytosis, cytoplasmic segregation, and impaired Nodal signaling/dorsal organizer formation. Expressing only the intracellular domain of Dchs1b partially rescues microtubule bundling, indicating cytoskeletal regulation is independent of the Fat ligand. Maternal-zygotic (MZ) dchs1b and dchs2 zebrafish mutants, live imaging, actin/microtubule disruption pharmacological phenocopy experiments, rescue with full-length and intracellular-domain-only constructs Development (Cambridge, England) High 26160902
2022 DCHS2 is a downstream effector of the lncRNA lncExACT1, functioning through the Hippo/YAP1 signaling pathway to regulate cardiac hypertrophy and cardiomyogenesis. Cardiomyocyte-specific DCHS2 overexpression in zebrafish induced pathological hypertrophy and impaired cardiac regeneration/promoted scarring after injury; murine cardiac-specific DCHS2 deletion induced physiological hypertrophy and promoted cardiomyogenesis. Zebrafish transgenic DCHS2 overexpression, cardiac-specific Cas9-knockin DCHS2 deletion in mice, AAV-mediated lncExACT1 overexpression, antisense GapmeR inhibition, promoter analyses and binding assays to identify DCHS2 as downstream effector Circulation High 35114812
2020 DCHS2 is required for normal hypothalamic-pituitary development; Dchs2-/- mouse mutants display anterior pituitary hypoplasia and partially penetrant infundibular defects, with normal commitment to anterior pituitary cell types. FAT2 and DCHS2 are strongly expressed in the mesenchyme surrounding the developing human pituitary. Dchs2-/- mouse mutants (histological phenotyping), human pituitary expression analysis, patient variant screening (cohort of 28 PSIS patients) JCI insight Medium 33108146
2025 In zebrafish, dchs2 has partially overlapping functions with dchs1a and dchs1b in regulating yolk microtubule polymerization dynamics and actin cytoskeleton organization during epiboly; dchs triple loss-of-function mutants show increased microtubule polymerization and bundling in the yolk cell. Epiboly defects of dchs1b mutants are suppressed by mutations in ttc28 (encoding a Dchs1b intracellular domain-binding protein), placing dchs1b upstream of ttc28 in microtubule regulation. dchs triple loss-of-function zebrafish mutants, GFP knock-in at endogenous dchs1b locus (live imaging of Dchs1b-GFP localization), genetic epistasis (dchs1b;ttc28 double mutants), transcriptomic analysis bioRxivpreprint Medium 40463075
2014 DCHS2 harbours frameshift mutations in gastric and colorectal cancers with high microsatellite instability (MSI-H), occurring in 8.8% of MSI-H gastric cancers and 4.2% of MSI-H colorectal cancers, suggesting inactivation of its cell-adhesion function in these tumours. SSCP analysis and DNA sequencing of 89 gastric and 131 colorectal cancer samples stratified by MSI status Pathology oncology research : POR Low 24898286
2004 DCHS2 (identified as CDH-J/PCDH-J) is a novel human cadherin superfamily gene; its exon-intron structure was experimentally verified by PCR and it displays tissue-specific expression. Protein motif search combined with gene-finding, PCR-based exon-intron verification, tissue expression profiling Journal of molecular biology Low 15003449

Source papers

Stage 0 corpus · 26 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2022 lncExACT1 and DCHS2 Regulate Physiological and Pathological Cardiac Growth. Circulation 96 35114812
2011 Genome-wide association analysis of age-at-onset in Alzheimer's disease. Molecular psychiatry 82 22005931
2015 Stromal Fat4 acts non-autonomously with Dchs1/2 to restrict the nephron progenitor pool. Development (Cambridge, England) 75 26116661
2014 Genes associated with the progression of neurofibrillary tangles in Alzheimer's disease. Translational psychiatry 54 26126179
2014 Fat-Dachsous signaling coordinates cartilage differentiation and polarity during craniofacial development. PLoS genetics 47 25340762
2014 Frameshift mutations of cadherin genes DCHS2, CDH10 and CDH24 genes in gastric and colorectal cancers with high microsatellite instability. Pathology oncology research : POR 37 24898286
2004 Identification of new human cadherin genes using a combination of protein motif search and gene finding methods. Journal of molecular biology 35 15003449
2015 Dachsous1b cadherin regulates actin and microtubule cytoskeleton during early zebrafish embryogenesis. Development (Cambridge, England) 34 26160902
2021 All HPV-negative head and neck cancers are not the same: Analysis of the TCGA dataset reveals that anatomical sites have distinct mutation, transcriptome, hypoxia, and tumor microenvironment profiles. Oral oncology 21 33725617
2020 Requirement of FAT and DCHS protocadherins during hypothalamic-pituitary development. JCI insight 16 33108146
2019 Assessment of Molecular Subtypes in Thyrotoxic Periodic Paralysis and Graves Disease Among Chinese Han Adults: A Population-Based Genome-Wide Association Study. JAMA network open 15 31050781
2023 Regulation of Sertoli cell function by planar cell polarity (PCP) protein Fjx1. Molecular and cellular endocrinology 8 37119967
2016 Association between DCHS2 gene and mild cognitive impairment and Alzheimer's disease in an elderly Brazilian sample. International journal of geriatric psychiatry 8 26876984
2024 Novel missense variants in brain morphogenic genes associated with depression and schizophrenia. Frontiers in psychiatry 6 38699454
2023 Are Genetic Modifiers the Answer to Different Responses to Hydroxyurea Treatment?-A Pharmacogenetic Study in Sickle Cell Anemia Angolan Children. International journal of molecular sciences 6 37240136
2024 Whole-exome sequencing of Nigerian benign prostatic hyperplasia reveals increased alterations in apoptotic pathways. The Prostate 4 38192023
2023 Fat and Dachsous cadherins in mammalian development. Current topics in developmental biology 4 37100519
2020 [Human facial shape related SNP analysis in Han Chinese populations]. Yi chuan = Hereditas 2 32694107
2025 Genome-Wide Association Study Reveals Genetic Architecture of Common Epilepsies. Clinical genetics 1 39904507
2022 Whole genome sequencing and inheritance-based variant filtering as a tool for unraveling missing heritability in pediatric cancer. Pediatric hematology and oncology 1 35876323
2026 Longitudinal Genome-Wide Association Study for Female Fertility Traits in German Holstein Cattle. Animal genetics 0 41670256
2026 Clinical and genetic basis of congenital gonadotropin deficiency. Human reproduction open 0 41873429
2026 Sex-specific genetic drivers of memory, executive functioning and language in older adults. Brain : a journal of neurology 0 41989867
2025 Regulation of the Yolk Microtubule and Actin Cytoskeleton by Dachsous Cadherins during Zebrafish Epiboly. bioRxiv : the preprint server for biology 0 40463075
2025 Sex-Specific Genetic Drivers of Memory, Executive Functioning, and Language Performance in Older Adults. medRxiv : the preprint server for health sciences 0 40492063
2025 GWAS for Periodontitis Phenotypes Using Multi-Ancestry All of Us Research Platform. medRxiv : the preprint server for health sciences 0 40963761

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