| 1991 |
The COQ3 gene in S. cerevisiae encodes the 3,4-dihydroxy-5-hexaprenylbenzoate (DHHB) methyltransferase, established by functional complementation of a coq3 mutant and one-step in situ gene replacement directing integration to the COQ3 locus on chromosome XV. The predicted amino acid sequence contains a methyltransferase consensus sequence and shows 40% identity with E. coli UbiG (gyrA5' open reading frame). |
Functional complementation of yeast coq3 mutant, in situ gene replacement, sequence analysis |
The Journal of biological chemistry |
High |
1885593
|
| 1994 |
A rat cDNA homologue of COQ3 was isolated by functional complementation of a yeast coq3 deletion mutant, establishing that the mammalian Coq3 protein is a dihydroxypolyprenylbenzoate methyltransferase conserved from yeast to mammals. The rat sequence shares 39% identity with yeast Coq3 and 37% with E. coli UbiG over 138 amino acids. |
Functional complementation of yeast coq3 deletion mutant with rat cDNA library, sequence analysis |
Gene |
High |
8125303
|
| 1996 |
E. coli UbiG catalyzes both O-methylation steps in ubiquinone biosynthesis (not just the second step). When engineered with a mitochondrial leader sequence, UbiG rescues respiration in yeast coq3 mutants. In vitro methyltransferase assays with synthetically prepared farnesylated substrate analogs showed UbiG methylates both the eukaryotic intermediate 3,4-dihydroxy-5-farnesylbenzoate and the E. coli intermediate 2-farnesyl-6-hydroxyphenol. Yeast Coq3p is located in mitochondria and mitochondrial targeting is essential for function in vivo. Mitochondrial import of Coq3p requires a membrane potential. |
Functional complementation, in vitro methyltransferase assays with synthetic substrate analogs, in vitro mitochondrial import assays |
Biochemistry |
High |
8703953
|
| 1999 |
Both yeast Coq3p and rat Coq3p catalyze both O-methylation steps in coenzyme Q biosynthesis, including methylation of demethyl-Q(3) (the second O-methylation step). E. coli UbiG was purified and shown to catalyze both O-methylation steps. Coq3p is peripherally associated with the matrix-side of the inner membrane of yeast mitochondria (confirmed by antibody localization studies). Q biosynthesis occurs within the matrix compartment of yeast mitochondria. |
In vitro methyltransferase assays with chemically synthesized farnesylated substrate analogs (demethyl-Q3 and Q3), antibody-based submitochondrial localization studies, protein purification |
The Journal of biological chemistry |
High |
10419476
|
| 2000 |
Human COQ3 encodes a functional O-methyltransferase required for ubiquinone biosynthesis. The human enzyme expressed in multicopy rescues yeast coq3 null mutants for growth on nonfermentable carbon sources and restores CoQ biosynthesis. In vitro methyltransferase assays demonstrated human Coq3 is active with all three substrates tested (3,4-dihydroxy-5-polyprenylbenzoic acid, demethyl-Q, and 2-hydroxy-6-polyprenyl phenol). The human protein shares 87% identity with rat Coq3 and 35% with yeast Coq3 in the conserved region. |
Functional complementation of yeast coq3 null mutant, in vitro methyltransferase assays with farnesylated analogs of CoQ intermediates |
The Journal of biological chemistry |
High |
10777520
|
| 2000 |
COQ3-encoded O-methyltransferase activity and steady-state Coq3 polypeptide levels depend on the presence of the other COQ gene products (Coq1–Coq8). COQ3 mRNA levels are not decreased in coq mutants, suggesting post-transcriptional regulation (decreased translation or decreased Coq3p stability). This constitutes genetic evidence that Coq polypeptides participate in a multi-subunit complex in which absence of any one member destabilizes Coq3p. |
In vitro O-methyltransferase activity assays on isolated mitochondria from a complete panel of yeast coq null mutants; steady-state RNA and protein level analysis |
Biochimica et biophysica acta |
High |
10760477
|
| 2003 |
Coq5p is required for stability of Coq3p and Coq4p. In coq5 null mutants and certain coq5 missense mutants, Coq3p and Coq4p are undetectable, establishing that Coq5p is required to maintain steady-state levels of Coq3p within the multi-subunit Q biosynthetic complex. |
Western blot analysis of steady-state Coq3p levels in yeast coq5 mutant collection; phenotypic complementation assays |
The Journal of biological chemistry |
Medium |
14701817
|
| 2004 |
Coq3p levels are dependent on expression of COQ1 (hexaprenyl diphosphate synthase) and are rescued by diverse Coq1 orthologs that produce distinct isoforms of Q. Coq1p is peripherally associated with the inner membrane on the matrix side. The lipid product of Coq1p or a Q-intermediate derived from polyprenyl diphosphate is required to stabilize Coq3p. |
Western blot analysis of Coq3p steady-state levels in yeast deltacoq1 mutants complemented with diverse prokaryotic Coq1 orthologs; mitochondrial fractionation |
The Journal of biological chemistry |
Medium |
15548532
|
| 2007 |
Coq3p is a subunit of a high molecular mass (~1 MDa) mitochondrial coenzyme Q biosynthetic complex. By Blue Native-PAGE, Coq3p co-migrates with Coq4p and Coq9p at ~1 MDa. Coq9p immunoprecipitates with Coq4p, Coq5p, Coq6p, and Coq7p, establishing at least six Coq polypeptides in a multi-subunit Q biosynthetic complex. |
Blue Native-PAGE, co-immunoprecipitation of HA-tagged Coq9p, submitochondrial fractionation |
Archives of biochemistry and biophysics |
Medium |
17391640
|
| 2012 |
Mclk1(+/-) (Coq7 heterozygous) mice show decreased ubiquinone in the inner mitochondrial membrane with compensatory increased ubiquinone in the outer membrane. In contrast, Coq3(+/-) mice have normal lifespan and no detectable defects in mitochondrial function or ubiquinone distribution, establishing that heterozygous Coq3 deficiency does not reproduce the Mclk1 phenotype. Homozygous Coq3 knockout is embryonic lethal, as is homozygous Mclk1 null. Dietary Q10 supplementation reversed mutant mitochondrial phenotypes in Mclk1(+/-) mice. |
Submitochondrial fractionation of highly purified mitochondrial membranes; dietary Q10 supplementation rescue; genetic comparison of Mclk1(+/-) vs Coq3(+/-) mice |
The Journal of cell biology |
Medium |
23045551
|
| 2014 |
Coq3p is a component of the CoQ-synthome (high molecular mass multi-subunit complex). Over-expression of Coq8 in coq3, coq5, coq6, coq7, coq9, and coq10 null mutants promotes association of Coq4 and other Coq polypeptides in high molecular mass complexes as shown by 2D BN/SDS-PAGE. Coq4 is identified as a central organizer of the Coq complex. Exogenous Q6 supplementation stabilizes Coq4, Coq7, and Coq9, and promotes late-stage Q-intermediate formation, with this stabilizing effect requiring Coq1 and Coq2 production of a polyisoprenyl intermediate. |
2D blue-native/SDS-PAGE of digitonin extracts from mitochondria; exogenous Q6 supplementation; genetic epistasis with Coq8 over-expression in multiple coq null backgrounds |
Biochimica et biophysica acta |
Medium |
24406904
|
| 2015 |
UbiG/Coq3 proteins define a novel class of membrane-binding proteins. E. coli UbiG binds specifically to liposomes containing phosphatidylglycerol (PG) or cardiolipin (CL). Human and yeast Coq3 display strong preference for liposomes enriched with cardiolipin, the signature lipid of the mitochondrial membrane. The crystal structure of E. coli UbiG was solved at 2.1 Å resolution, revealing a Class I SAM-methyltransferase fold with a unique insertion between strand β5 and helix α10 that is highly conserved and required for membrane binding. Mutagenesis of key residues in this insertion abolished liposome binding in vitro and failed to rescue the ΔubiG phenotype in vivo. |
Crystal structure determination (2.1 Å), liposome binding assays, site-directed mutagenesis, in vivo complementation assays |
The Biochemical journal |
High |
26251450
|
| 2016 |
Human ADCK3 (an atypical kinase involved in CoQ10 biosynthesis) associates in vitro with recombinant Coq3, Coq5, Coq7, and Coq9 proteins, placing Coq3 as a binding partner of the ADCK3 regulatory kinase within the CoQ biosynthetic machinery. |
In vitro protein-protein interaction assay (recombinant protein pulldown) |
PloS one |
Low |
26866375
|
| 2020 |
In human 143B mitochondria, PDSS2 and COQ3 play more important roles in maintaining the stability of other COQ proteins than other COQ subunits. COQ3 was detected in protein complexes in the mitochondria, including complexes containing PDSS2, COQ4, COQ6, and COQ7. Multiple isoforms of COQ3 protein were identified. Knockdown of PDSS2 suppressed COQ3 levels, while COQ3 knockdown suppressed levels of other COQ proteins. |
Immunoprecipitation/native gel electrophoresis of mitochondrial complexes; siRNA knockdown with Western blot; specific antibody characterization; mitochondrial localization of mature proteins |
Biochimica et biophysica acta. Bioenergetics |
Medium |
32194061
|
| 2023 |
RTN4IP1 (OPA10), an NADPH oxidoreductase enriched in the mitochondrial matrix of muscle tissues, regulates the O-methylation activity of COQ3. Interactome analysis showed RTN4IP1 associates with COQ3. In vitro enzymatic assays demonstrated an essential role for RTN4IP1 in CoQ biosynthesis through regulation of COQ3 O-methylation activity. Rtn4ip1-knockout myoblasts showed markedly decreased CoQ9 levels and impaired cellular respiration. |
Proximity-labeling proteomics (matrix-targeted APEX in transgenic mice), interactome analysis, in vitro enzymatic assays, Rtn4ip1-KO myoblast CoQ measurement, muscle-specific RNAi in Drosophila |
Nature chemical biology |
High |
37884807
|
| 2024 |
COQ3, COQ4, COQ5, COQ6, COQ7, and COQ9 form the COQ metabolon in animals, and this metabolon was reconstituted in vitro using ancestral sequence reconstruction. Within the metabolon, COQ3 participates as one of the core biosynthetic enzymes. COQ8 (a kinase) increases and streamlines coenzyme Q production when added to the in vitro reconstituted metabolon. |
In vitro reconstitution of the entire COQ metabolon using ancestral sequence reconstruction; enzymatic activity assays |
Nature catalysis |
High |
38425362
|
| 2025 |
In yeast, COQ11 deletion suppresses respiratory deficiency of select ERMES (ER-mitochondria encounter structure) mutants and repairs/reorganizes the CoQ synthome (which contains Coq3-Coq9). Loss of ERMES destabilizes the CoQ synthome, implicating ER-mitochondrial contact sites in regulating CoQ biosynthesis and the stability of the complex containing Coq3. Artificial ER-mitochondria tethers (Split-MAM) influence CoQ content and turnover. |
Genetic epistasis (COQ11 deletion in ERMES mutant backgrounds), 2D BN/SDS-PAGE of CoQ synthome, Split-MAM artificial tether experiments, CoQ content measurement |
Contact (Thousand Oaks) |
Medium |
39906518
|
| 1996 |
Q-deficient yeast harboring a COQ3 deletion are hypersensitive to autoxidation products of polyunsaturated fatty acids and accumulate elevated lipid hydroperoxides. This phenotype is rescued by the COQ3 gene on a single-copy plasmid, by butylated hydroxytoluene, alpha-tocopherol, or trolox (vitamin E analog), establishing that ubiquinol (QH2, the reduced form of CoQ produced via the Coq3-dependent pathway) functions as a lipid-soluble antioxidant in vivo. |
Genetic deletion of COQ3, lipid hydroperoxide measurement, rescue by plasmid-borne COQ3 and chemical antioxidants |
Proceedings of the National Academy of Sciences of the United States of America |
High |
8755509
|
| 1998 |
Coenzyme Q produced by the Coq3-dependent biosynthetic pathway is required for NADH-ascorbate free radical reductase activity in the plasma membrane of S. cerevisiae. Plasma membranes from coq3Δ cells are completely devoid of CoQ6 and have ~10% of wild-type NADH-ascorbate free radical reductase activity, which is rescued by transformation with a COQ3 plasmid or growth in the presence of exogenous CoQ6. |
Enzyme activity assays on plasma membranes from coq3Δ cells; genetic rescue with COQ3 plasmid; exogenous Q6 supplementation rescue; comparison with respiratory-deficient but Q-replete controls (atp2Δ, cor1Δ) |
Journal of bioenergetics and biomembranes |
Medium |
9932649
|
| 2014 |
Human COQ3 functionally complements S. pombe coq3 deletion strains and restores CoQ10 production, but only when a mitochondrial targeting sequence is added to the human construct. This establishes that the human COQ3 protein requires mitochondrial targeting for function in fission yeast, consistent with its role as a mitochondrial matrix enzyme. |
Functional complementation of S. pombe coq3 deletion with human COQ3 constructs with/without mitochondrial targeting sequence; CoQ10 measurement by HPLC |
PloS one |
Medium |
24911838
|