Affinage

CNTD1

Cyclin N-terminal domain-containing protein 1 · UniProt Q8N815

Length
330 aa
Mass
36.9 kDa
Annotated
2026-06-09
9 papers in source corpus 7 papers cited in narrative 7 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CNTD1 is a cyclin-related protein that functions as a central coordinator of meiotic crossover (CO) maturation, ensuring that designated recombination intermediates are converted into mature, correctly positioned crossovers during prophase I (PMID:24891606). It acts by regulating the chromosomal dynamics and redistribution of RING-finger E3 ligases at CO sites: loss of CNTD1 prevents localization of the CO-specific factors MutLγ (MLH1/MLH3) and HEI10 while leaving cells in a prolonged pre-CO state marked by MutSγ and RNF212, and CNTD1 governs the late-pachynema unloading of RNF212B together with HEI10 (PMID:24891606, PMID:38865271). CNTD1 builds CO-specific recombination complexes through physical interaction with the proline-rich protein PRR19 and with CDK2, with PRR19 and CNTD1 being interdependent for accumulation at CO sites and jointly required for timely double-strand break repair (PMID:32555348). A short CNTD1 isoform lacking the N-terminal cyclin domain forgoes CDK binding and instead associates with the replication factor C (RFC) machinery and with the E2 ubiquitin-conjugating enzyme CDC34 to drive ubiquitylation and degradation of WEE1 kinase, thereby coupling CO formation to meiotic cell-cycle progression (PMID:32640224). Beyond CO designation, CNTD1 establishes the ovarian follicular reserve: its loss triggers CHK2-dependent follicle depletion associated with inappropriate HORMAD1 retention and absence of SKP1 (PMID:40488668). Across vertebrate and invertebrate models, CNTD1/COSA-1 loss impairs crossover formation and compromises ploidy integrity, causing meiotic arrest, spermatocyte apoptosis, and production of aneuploid gametes (PMID:26920220, PMID:38421617).

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 2014 High

    Established CNTD1 as a required factor for crossover maturation by showing it controls whether pre-CO intermediates are resolved into mature crossovers, defining its place at the designation step of meiotic recombination.

    Evidence Mouse Cntd1 knockout with immunofluorescence of CO markers (MutLγ, HEI10, MutSγ, RNF212) on meiotic chromosome spreads

    PMID:24891606

    Open questions at the time
    • Did not resolve whether CNTD1 acts directly on the RING-finger ligases or through partner proteins
    • No biochemical demonstration of CNTD1 enzymatic or scaffolding activity
  2. 2016 Medium

    Placed the CNTD1 ortholog COSA-1 downstream of MAP kinase signaling in crossover promotion, linking a conserved kinase pathway to crossover-associated SC disassembly.

    Evidence C. elegans genetic epistasis of RAS/ERK (MPK-1) mutants with cosa-1 and zhp-3 mutants, immunofluorescence of SC and CO markers

    PMID:26920220

    Open questions at the time
    • Ortholog-based; mammalian CNTD1 not directly tested for MAP kinase dependence
    • Did not establish direct molecular contact between COSA-1 and MAP kinase components
  3. 2020 High

    Identified the physical CO-complex partners of CNTD1, showing it works with PRR19 and CDK2 to assemble crossover-specific recombination complexes and promote DSB repair.

    Evidence Reciprocal co-immunoprecipitation, co-immunofluorescence on chromosome spreads, and Prr19/Cntd1 mouse knockouts

    PMID:32555348

    Open questions at the time
    • Did not define the structural basis or stoichiometry of the CNTD1–PRR19–CDK2 complex
    • Whether CDK2 kinase activity within the complex is required was not resolved
  4. 2020 High

    Revealed an isoform-specific dual function: a cyclin-domain-lacking CNTD1 isoform couples crossover formation to cell-cycle control via RFC association and CDC34-dependent WEE1 degradation, distinguishing CNTD1's recombination and cell-cycle roles.

    Evidence Epitope-tagged Cntd1 knock-in mouse, co-IP with RFC components and CDC34, isoform characterization, and in vivo WEE1 ubiquitylation/degradation assay

    PMID:32640224

    Open questions at the time
    • Mechanism by which CNTD1 directs CDC34 substrate selection toward WEE1 was not defined
    • How the two isoforms are produced and balanced in vivo remains uncharacterized
  5. 2024 Medium

    Extended CNTD1's role in RING-finger ligase regulation by showing it, together with HEI10, governs the chromosomal unloading of RNF212B at late pachynema.

    Evidence Cntd1, Hei10, and Rnf212b mouse knockouts with co-localization on chromosome spreads and Rnf212b/Rnf212 genetic epistasis

    PMID:38865271

    Open questions at the time
    • No direct co-IP demonstrating CNTD1–RNF212B physical interaction
    • Single lab; mechanism of unloading not biochemically defined
  6. 2024 Medium

    Demonstrated the functional consequence of CNTD1 loss for genome integrity across sexes in a vertebrate model, tying crossover failure to meiotic arrest, apoptosis, and aneuploid gamete production.

    Evidence CRISPR/Cas9 cntd1 knockout in zebrafish with cytological meiotic analysis and gamete ploidy assessment

    PMID:38421617

    Open questions at the time
    • Did not address whether zebrafish CNTD1 uses the same isoform/WEE1 mechanism as mouse
    • Molecular basis of sex-specific ploidy outcomes not resolved
  7. 2025 High

    Uncovered a CO-independent role for CNTD1 in establishing the ovarian follicular reserve, acting through a CHK2-dependent surveillance pathway linked to HORMAD1 retention and SKP1 absence.

    Evidence Mouse Cntd1 knockout with HORMAD1/SKP1 immunofluorescence, Chk2 genetic epistasis, and histological follicle quantification

    PMID:40488668

    Open questions at the time
    • How CNTD1 normally promotes HORMAD1 removal and SKP1 presence is not mechanistically defined
    • Whether follicle loss is a direct CNTD1 function or a downstream consequence of CO failure was not fully separated

Open questions

Synthesis pass · forward-looking unresolved questions
  • The biochemical activity of CNTD1 itself — whether it acts as a bona fide cyclin partner, a scaffold, or an adaptor that licenses E3 ligase and E2 activity — and the structural basis of its assembled complexes remain unresolved.
  • No structural model of CNTD1 or its complexes
  • Direct enzymatic or scaffolding mechanism not biochemically reconstituted
  • Human disease relevance not established in the available corpus

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 2 GO:0098772 molecular function regulator activity 2
Localization
GO:0000228 nuclear chromosome 3
Pathway
R-HSA-1474165 Reproduction 3 R-HSA-1640170 Cell Cycle 2 R-HSA-73894 DNA Repair 2
Complex memberships
CO-specific recombination complex (CNTD1-PRR19-CDK2)RFC machinery (short isoform)

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2014 CNTD1 is required for maturation of meiotic crossovers (COs): disruption of Cntd1 causes failure to localize CO-specific factors MutLγ (MLH1/MLH3) and HEI10 at designated CO sites, and leads to prolonged high levels of pre-CO intermediates marked by MutSγ and RNF212. CNTD1 coordinates CO maturation by regulating the association between the RING finger proteins HEI10 and RNF212 and components of the CO machinery. Mouse knockout (Cntd1 disruption), immunofluorescence localization of CO-specific factors (MutLγ, HEI10, MutSγ, RNF212) on meiotic chromosome spreads The Journal of cell biology High 24891606
2016 In C. elegans, the CNTD1 ortholog COSA-1 acts downstream of the MAP kinase pathway (MPK-1) as a crossover-promoting factor; inactivation of MAP kinase at late pachytene is required for timely disassembly of SC proteins from chromosome long arms, and this process depends on ZHP-3/RNF212/Zip3 and COSA-1/CNTD1. C. elegans genetic epistasis: RAS/ERK pathway mutants combined with cosa-1 and zhp-3 mutants, immunofluorescence of SC components and crossover markers eLife Medium 26920220
2020 CNTD1 physically interacts with the proline-rich protein PRR19; PRR19 and CNTD1 co-localise at crossover sites, are interdependent for accumulation, and both are required for timely DSB repair and formation of crossover-specific recombination complexes. Additionally, CNTD1 interacts with CDK2, which also accumulates in crossover-specific recombination complexes. Co-immunoprecipitation (physical interaction), co-immunofluorescence on meiotic chromosome spreads, mouse knockouts of Prr19 and Cntd1 with analysis of DSB repair and CO-specific complexes Nature communications High 32555348
2020 A short isoform of CNTD1 lacking the predicted N-terminal cyclin domain does not bind cyclin-dependent kinases; instead it associates with components of the replication factor C (RFC) machinery to facilitate crossover formation, and with the E2 ubiquitin-conjugating enzyme CDC34 to regulate ubiquitylation and subsequent degradation of the WEE1 kinase, thereby modulating cell-cycle progression during meiotic prophase I. Epitope-tagged Cntd1 knock-in mouse, co-immunoprecipitation with RFC components and CDC34, isoform characterization, in vivo ubiquitylation/degradation assay for WEE1 Cell reports High 32640224
2024 RNF212B co-localizes and interacts with CNTD1 at late CO foci by late pachynema; genetic analysis shows that the unloading of RNF212B from chromosomes at the end of pachynema is dependent on HEI10 and CNTD1, placing CNTD1 as a regulator of RNF212B dynamics. Mouse knockouts (Cntd1, Hei10, Rnf212b), immunofluorescence co-localization on meiotic chromosome spreads, genetic epistasis with Rnf212b/Rnf212 double mutants Proceedings of the National Academy of Sciences of the United States of America Medium 38865271
2024 Knockout of cntd1 in zebrafish (CRISPR/Cas9) impairs meiotic crossover formation, leading to cell-cycle arrest during meiotic metaphase and apoptosis of spermatocytes; in females, cntd1 loss causes production of unreduced (haploid, aneuploid, or diploid) eggs, demonstrating a sex-specific role for CNTD1 in maintaining ploidy integrity during meiosis. CRISPR/Cas9 knockout of cntd1 in zebrafish, cytological analysis of meiotic progression, ploidy analysis of gametes and offspring Molecular biology and evolution Medium 38421617
2025 CNTD1-deficient oocytes fail to form crossovers. Additionally, loss of CNTD1 causes severe depletion of the follicle pool shortly after birth; this follicle loss is CHK2-dependent and results from inappropriate retention of HORMAD1 and absence of SKP1, establishing a novel role for CNTD1 in establishing the ovarian follicular reserve beyond its role in CO designation. Mouse conditional/full knockout of Cntd1, immunofluorescence for HORMAD1/SKP1, genetic interaction with Chk2 knockout, histological analysis of ovarian follicle pools The Journal of cell biology High 40488668

Source papers

Stage 0 corpus · 9 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Mammalian CNTD1 is critical for meiotic crossover maturation and deselection of excess precrossover sites. The Journal of cell biology 64 24891606
2013 MRNA and miRNA expression patterns associated to pathways linked to metal mixture health effects. Gene 55 24080485
2016 The MAP kinase pathway coordinates crossover designation with disassembly of synaptonemal complex proteins during meiosis. eLife 38 26920220
2020 Proline-rich protein PRR19 functions with cyclin-like CNTD1 to promote meiotic crossing over in mouse. Nature communications 28 32555348
2020 Cyclin N-Terminal Domain-Containing-1 Coordinates Meiotic Crossover Formation with Cell-Cycle Progression in a Cyclin-Independent Manner. Cell reports 21 32640224
2024 RNF212B E3 ligase is essential for crossover designation and maturation during male and female meiosis in the mouse. Proceedings of the National Academy of Sciences of the United States of America 18 38865271
2024 Formation of Different Polyploids Through Disrupting Meiotic Crossover Frequencies Based on cntd1 Knockout in Zebrafish. Molecular biology and evolution 6 38421617
2025 CNTD1 is crucial for crossover formation in female meiosis and for establishing the ovarian reserve. The Journal of cell biology 2 40488668
2026 Meiotic gene variants contribute to recurrent blastulation failure. Human reproduction open 0 42221552

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