| 2000 |
ICK (intestinal cell kinase) was cloned and identified as a novel serine/threonine kinase harboring a dual phosphorylation site (TXY motif) found in MAP kinases, which is important for kinase activity; it localizes to the intestinal crypt region. |
PCR cloning from intestinal crypt cDNA library, Northern blot, RNA in situ hybridization |
Journal of cellular physiology |
Medium |
10699974
|
| 2012 |
ICK promotes activation of mTOR complex 1 (mTORC1) by directly phosphorylating Raptor at Thr-908; ICK can phosphorylate Raptor both in vitro and in vivo, and expression of Raptor T908A mutant markedly impairs mTORC1 activation by insulin or RheB under nutrient starvation. |
In vitro kinase assay, mass spectrometry, phospho-specific antibody, co-immunoprecipitation, site-directed mutagenesis (T908A) |
The Journal of biological chemistry |
High |
22356909
|
| 2014 |
ICK localizes to the tip of cilia and is essential for ciliary transport; loss of ICK in mice causes accumulation of IFT-A, IFT-B, and BBSome components at ciliary tips, while overexpression induces IFT-B (but not IFT-A or BBSome) accumulation at tips; ICK directly phosphorylates Kif3a, and inhibition of this phosphorylation affects ciliary formation. |
ICK-deficient mouse model, immunolocalization, live imaging, in vitro kinase assay (Kif3a phosphorylation), overexpression experiments |
The EMBO journal |
High |
24797473
|
| 2014 |
ICK and MOK localize to cilia of renal epithelial cells and negatively regulate cilium length; ICK is transported as part of or by the IFT machinery (moves at ~0.45 µm/s similar to IFT proteins); ICK knockdown increases anterograde IFT velocities while overexpression reduces retrograde IFT speed; effects on cilia length and IFT are suppressed by rapamycin, implicating the mTORC1 pathway. |
Live fluorescence imaging of GFP-tagged IFT proteins, siRNA knockdown, overexpression, rapamycin treatment, velocity measurements |
PloS one |
High |
25243405
|
| 2016 |
A missense mutation p.E80K in ICK abolishes serine/threonine kinase activity, resulting in altered ICK subcellular and ciliary localization, increased cilia length, aberrant cartilage growth plate structure, and defective Hedgehog and altered ERK signaling; ICK kinase activity is thus required for normal Hedgehog signaling and skeletogenesis. |
Exome sequencing of patient cohort, in vitro kinase activity assay of E80K mutant, immunofluorescence localization, patient fibroblast analysis |
Human molecular genetics |
High |
27466187
|
| 2016 |
ICK mutations (p.R272Q and p.G120C) cause ECO syndrome; mutant ICK proteins mislocalize to the ciliary tip rather than distributing along the axoneme/ciliary base as wild-type ICK does; cells from affected individuals show decreased ciliation, confirming ICK regulates ciliogenesis. |
Homozygosity mapping, whole-exome sequencing, mRFP-ICK expression (wild-type and mutant), immunocytochemistry of patient fibroblasts |
Cilia |
Medium |
27069622
|
| 2017 |
ICK regulates intraflagellar transport (IFT) at the tip of kinocilia in inner ear hair cells; loss of Ick leads to abnormal ciliary localization of IFT component Ift88, planar cell polarity (PCP) defects including misorientation of stereocilia and aberrant kinocilium localization, and auditory dysfunction. |
Conditional Ick knockout mice, immunofluorescence (Ift88 localization), auditory function tests (ABR), confocal microscopy of stereocilia |
The Journal of neuroscience |
High |
28115485
|
| 2019 |
The C-terminal non-catalytic domain (CTD) of ICK/CAPK is required for substrate recognition and phosphorylation of KIF3A; CTD truncation impairs both KIF3A phosphorylation and localization of ICK to the primary cilium, and eliminates negative regulation of ciliogenesis. |
CTD truncation mutants, in vitro kinase assay (KIF3A phosphorylation), immunofluorescence localization, ciliation rate quantification |
Cells |
Medium |
31277411
|
| 2020 |
ICK/CILK1 is transported anterogradely to the ciliary tip via direct interaction of its C-terminal non-catalytic region with the IFT-B complex; ICK undergoes bidirectional movement within cilia at velocities similar to IFT particles; ICK deficiency severely impairs retrograde IFT trafficking and causes ciliary proteins and IFT components to accumulate at the bulged ciliary tip, which can be released as extracellular vesicles; IFT-dependent transport of ICK, its kinase activity, and TDY motif phosphorylation are all required for ICK function. |
Co-immunoprecipitation (ICK C-terminal domain with IFT-B complex), total internal reflection fluorescence (TIRF) microscopy of ICK movement, ICK knockout cell analysis, exogenous expression of ICK constructs in KO cells |
The Journal of biological chemistry |
High |
32732286
|
| 2020 |
JME pathogenic mutations in the CILK1 N-terminal kinase domain abolish kinase activity and eliminate phosphorylation of KIF3A at Thr672; JME mutations in the C-terminal non-catalytic domain (CTD) retain kinase activity but lose ability to restrict cilia length, promote ciliogenesis, and shift localization from the ciliary base to the entire axoneme. |
In vitro kinase assay (KIF3A-Thr672 phosphorylation), immunofluorescence localization, cilia length measurements, ciliation rate quantification |
Cells |
Medium |
32178256
|
| 2020 |
Eliminating Kif3a Thr674 phosphorylation by Cilk1 (via T674A knock-in mouse) is insufficient to reproduce the severe developmental defects caused by Cilk1 loss of function, indicating that KIF3A-Thr672 phosphorylation is not essential for tissue development and that other CILK1 substrates mediate ciliopathy phenotypes. |
Kif3a T674A knock-in mouse model, skeletal analysis, MEF ciliation assay, cilia length measurement |
Developmental dynamics |
Medium |
32935890
|
| 2022 |
BROMI/TBC1D32 interacts with CCRK/CDK20, which phosphorylates and activates ICK/CILK1; BROMI also interacts with FAM149B1/JBTS36 and CFAP20; CCRK-KO, BROMI-KO, and FAM149B1-KO cells all show abnormally long cilia and accumulation of IFT machinery and ICK at the ciliary tip, placing CCRK upstream of ICK in a signaling axis that regulates IFT turnaround at the ciliary tip. |
Co-immunoprecipitation, knockout cell analysis (CCRK-KO, BROMI-KO, FAM149B1-KO), rescue experiments with BROMI mutants defective in CCRK binding, immunofluorescence |
Molecular biology of the cell |
High |
35609210
|
| 2022 |
Alvocidib potently inhibits CILK1 kinase activity (IC50 = 20 nM) and induces CILK1-dependent cilia elongation, demonstrating pharmacological inhibition of CILK1 modulates primary cilia length. |
In vitro kinase inhibition assay (IC50 determination), cilia length measurements in cells treated with Alvocidib vs. CILK1 KO cells |
International journal of molecular sciences |
Medium |
35897693
|
| 2022 |
KLC3 (kinesin light chain-3) interacts with CILK1 at cilia bases; in CILK1-deficient cells, KLC3 is upregulated and its overexpression promotes ciliary recruitment of IFT-B and EGFR, contributing to cystic defects; reduction of KLC3 rescues ciliary defects and inhibits cyst progression in CILK1-deficient kidneys. |
Yeast two-hybrid, co-immunoprecipitation, immunocytochemistry, conditional Cilk1 KO mice, KLC3 knockdown rescue experiments |
Journal of the American Society of Nephrology |
Medium |
35961787
|
| 2023 |
KATNIP (katanin-interacting protein/KIAA0556) co-localizes with CILK1 at the basal body; the CILK1 C-terminal intrinsically disordered region (IDR) mediates binding to KATNIP; KATNIP binding drastically elevates CILK1 protein levels and TDY motif phosphorylation (activation), increases phosphorylation of CILK1 substrates, and suppresses cilia length, establishing KATNIP as a regulatory scaffold that potentiates CILK1 function. |
Co-immunoprecipitation, deletion analysis of CILK1 IDR and KATNIP DUF domains, immunofluorescence colocalization, CILK1 substrate phosphorylation assays, cilia length measurement |
Molecular and cellular biology |
High |
37665596
|
| 2024 |
CCRK kinase is an upstream activator of both Mak and Ick in retinal photoreceptor cells; Mak and Ick cooperatively regulate IFT at ciliary tips; simultaneous disruption of Mak and Ick causes loss of photoreceptor ciliary axonemes and severe retinal degeneration; gene delivery of Ick ameliorates retinal degeneration in Mak-deficient mice; FGF receptors act as negative regulators of Ick. |
Conditional double-KO mouse model (Mak and Ick), AAV-mediated Ick gene delivery rescue, FGF receptor inhibitor treatment, retinal histology, in vivo epistasis analysis |
Life science alliance |
High |
39293864
|
| 2024 |
A JME-associated CILK1 A615T variant (in the C-terminal IDR) compromises KATNIP-mediated regulation of CILK1; MEFs with the A612T knock-in allele (heterozygous or homozygous) show higher ciliation rate, shorter cilia, and upregulation of ciliary Hedgehog signaling; the CILK1 A615T mutant protein is not elevated by KATNIP co-expression to the same extent as wild-type CILK1. |
Knock-in mouse model (A612T), MEF analysis, immunofluorescence (ciliation rate, cilia length), Hedgehog signaling readout, co-expression with KATNIP |
Cells |
Medium |
39120290
|
| 2025 |
KATNIP disease variants that truncate near the C-terminus (M1474C) bind to CILK1 but do not support TDY activating phosphorylation in CILK1, phosphorylation of CILK1 substrates, or restriction of cilia length and ciliation rate; residues 1524-1573 of KATNIP (predicted β-sheets and α-helix) are essential for CILK1 activation, separating KATNIP's binding and activation functions for CILK1. |
KATNIP deletion constructs, Co-immunoprecipitation, TDY phosphorylation assay, CILK1 substrate phosphorylation assay, cilia length and ciliation rate quantification |
Journal of cell science |
Medium |
40621737
|
| 2025 |
A homozygous frameshift variant in the CILK1 non-catalytic C-terminal domain causes cranioectodermal dysplasia; patient-derived cells show reduced cilia number, increased cilia length, and disrupted IFT component localization; the CILK1 variant protein retains correct ciliary localization; reintroduction of wild-type CILK1 rescues the majority of ciliary defects. |
Patient-derived cell analysis, C. elegans model, immunofluorescence (cilia number/length, IFT localization), rescue by CILK1 re-expression |
European journal of human genetics |
Medium |
40615527
|
| 2024 |
In C. elegans, absence of DYF-5 (CILK1 homolog) causes accumulation of IFT components at the ciliary tip, loss of restriction of kinesin-II to the proximal ciliary segment, reduced IFT train frequency (especially retrograde trains), and impaired retrograde transport leading to depletion of IFT components at the ciliary base and impeded anterograde train assembly; DYF-5/CILK1 thus regulates IFT train turnaround at the ciliary tip. |
Fluorescence imaging and single-molecule tracking in live C. elegans phasmid cilia, IFT velocity and frequency measurements in dyf-5 null mutants |
bioRxivpreprint |
Medium |
bio_10.1101_2024.09.11.612404
|