Affinage

CFAP184

Cilia- and flagella-associated protein 184 · UniProt Q2M329

Length
555 aa
Mass
62.7 kDa
Annotated
2026-06-09
6 papers in source corpus 3 papers cited in narrative 3 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CFAP184 (CCDC96) is an axonemal protein that contributes to the structural and regulatory architecture governing ciliary motility (PMID:33661892). It forms a stable complex with CCDC113 that localizes parallel to the nexin-dynein regulatory complex (N-DRC) in the ciliary axoneme, physically connecting radial spoke 3 (RS3) to dynein g and the N-DRC; while CFAP184 and CCDC113 can each be transported to cilia independently, stable docking and function require both subunits (PMID:33661892). Structural analysis places this complex in close contact with DRC9/10 in the linker region of the N-DRC (PMID:37714832). Deletion of CFAP184 alters ciliary beat frequency, amplitude, and waveform, consistent with a role in transmitting regulatory signals from RS3 and the N-DRC to dynein g to coordinate motility (PMID:33661892). An earlier proteomic and localization study also placed CCDC96 at the centrosome in cultured mammalian cells (PMID:25074808).

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2014 Medium

    Established a first subcellular foothold for an uncharacterized coiled-coil protein by identifying it in centriole-associated proteomes, raising the question of its functional role at microtubule-based structures.

    Evidence Mass spectrometry of sperm centrioles with fluorescence localization in cultured mammalian cells

    PMID:25074808

    Open questions at the time
    • Single lab, single localization method for CCDC96
    • No functional role assigned
    • No binding partners identified
  2. 2021 High

    Resolved CFAP184's molecular role by showing it forms a CCDC113-dependent complex bridging radial spoke 3 to dynein g and the N-DRC, and that its loss disrupts ciliary beating — establishing it as a regulatory link in the axonemal motility machinery.

    Evidence Genetic deletion, cryo-electron tomography, co-immunoprecipitation, and cilia beating assays

    PMID:33661892

    Open questions at the time
    • Precise mechanism by which the signal is transmitted to dynein g not defined
    • Stoichiometry of the CFAP184/CCDC113 complex unresolved
    • How independent transport to cilia is coordinated into stable docking unknown
  3. 2023 High

    Refined the structural placement of the complex by showing the CCDC96/CCDC113 module contacts DRC9/10 in the N-DRC linker region, anchoring its proposed regulatory connection in molecular detail.

    Evidence Cryo-electron microscopy with biochemical cross-linking and integrative modeling in Tetrahymena thermophila

    PMID:37714832

    Open questions at the time
    • Single study and single organism
    • Functional consequence of the DRC9/10 contact not tested by perturbation
    • Atomic-resolution model of the interface not established

Open questions

Synthesis pass · forward-looking unresolved questions
  • How CFAP184 mechanically transduces RS3/N-DRC regulatory cues into modulation of dynein g activity, and whether its centrosomal localization reflects a distinct non-ciliary function, remain unresolved.
  • No direct demonstration of signal transduction to dynein g activity
  • Relationship between centrosomal and axonemal localizations unexplained
  • No human disease association established in the corpus

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005198 structural molecule activity 2 GO:0008092 cytoskeletal protein binding 1
Localization
GO:0005929 cilium 2 GO:0005815 microtubule organizing center 1
Partners
Complex memberships
CCDC96/CCDC113 complexN-DRC (associated)

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2014 CCDC96 (CFAP184) localizes to the centrosome in cultured mammalian cells, as determined by proteomic analysis of sperm centrioles followed by localization assessment. Mass spectrometry of sperm centrioles; fluorescence localization in cultured cells Journal of cell science Medium 25074808
2021 Ccdc96 (CFAP184) forms a complex with Ccdc113, positioned parallel to the nexin-dynein regulatory complex (N-DRC) and connecting radial spoke 3 (RS3) to dynein g and N-DRC in the ciliary axoneme. Although Ccdc96 and Ccdc113 can be transported to cilia independently, stable docking and function requires both proteins. Deletion of CCDC96 alters cilia beating frequency, amplitude, and waveform, consistent with a role in transmitting regulatory signals from RS3 and N-DRC to dynein g. Genetic deletion, cryo-electron tomography, co-immunoprecipitation, functional cilia beating assays PLoS genetics High 33661892
2023 The CCDC96/CCDC113 complex is in close contact with DRC9/10 in the linker region of the N-DRC structure of Tetrahymena thermophila, as revealed by cryo-electron microscopy with biochemical cross-linking and integrative modeling. Cryo-electron microscopy, biochemical cross-linking, integrative structural modeling Nature communications High 37714832

Source papers

Stage 0 corpus · 6 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Proteomic analysis of mammalian sperm cells identifies new components of the centrosome. Journal of cell science 93 25074808
2021 Ccdc113/Ccdc96 complex, a novel regulator of ciliary beating that connects radial spoke 3 to dynein g and the nexin link. PLoS genetics 38 33661892
2023 Integrated modeling of the Nexin-dynein regulatory complex reveals its regulatory mechanism. Nature communications 29 37714832
2025 ZFP36 inhibits the pro-apoptotic effects of transforming growth factor β1 on mitral valve interstitial cells via the GTP-binding protein 6 pathway in mitral valve prolapse. Experimental physiology 1 41214760
2023 Integrated modeling of the Nexin-dynein regulatory complex reveals its regulatory mechanism. bioRxiv : the preprint server for biology 1 37398254
2026 A novel hsa_circ_0070963/miR-223-3p/ CCDC96-CCDC112 regulatory axis as a non-invasive biomarker for predicting sperm retrieval outcomes in non-obstructive azoospermia: A case-control study. International journal of reproductive biomedicine 0 42200093

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