Affinage

CCDC116

Coiled-coil domain-containing protein 116 · UniProt Q8IYX3

Length
613 aa
Mass
67.9 kDa
Annotated
2026-06-09
7 papers in source corpus 2 papers cited in narrative 3 extracted findings
Cross-family judge faithfulness: 3/3 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CCDC116 is a centrosome-associated protein that functions as a downstream effector promoting centriole overduplication (PMID:25074808, PMID:41401801). It is recruited to the centrosome through a PLK1–CEP20 signaling axis: PLK1-dependent phosphorylation of CEP20 at Ser46 generates a high-affinity binding site for CCDC116, and a phospho-deficient CEP20-S46A mutant fails to support this recruitment (PMID:41401801). Knockdown of CCDC116 abolishes centrosomal localization of the CEP20–CCDC116 complex and prevents centrosome amplification, including the overduplication driven by Nε-carboxymethyl-lysine (CML) exposure in human hepatocytes, establishing CCDC116 as a required effector for centriole overduplication in this pathway (PMID:41401801). Beyond its recruitment by phospho-CEP20 and its requirement for centrosome amplification, no biochemical activity or structural detail for CCDC116 has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 3 steps
  1. 2014 Medium

    Established CCDC116 as a centrosome-associated protein, placing an otherwise uncharacterized protein at a defined subcellular structure and motivating a centriole-related function.

    Evidence Mass spectrometry of sperm centrioles with immunofluorescence localization in cultured mammalian cells

    PMID:25074808

    Open questions at the time
    • Single localization experiment with no functional follow-up
    • No interacting partners or recruitment mechanism identified
    • No molecular activity assigned
  2. 2025 Medium

    Defined how CCDC116 reaches the centrosome and what it does there, showing PLK1-phosphorylated CEP20 (phospho-Ser46) recruits CCDC116 to drive centriole overduplication.

    Evidence CEP20-S46A phospho-mutant and CCDC116 knockdown with centrosome amplification quantification in human hepatocytes (THLE2/THLE3)

    PMID:41401801

    Open questions at the time
    • Direct CCDC116–CEP20 binding affinity and stoichiometry not structurally resolved
    • Biochemical activity of CCDC116 itself unknown
    • Findings from a single lab
  3. 2025 Medium

    Showed CCDC116 is a required downstream effector by demonstrating its loss blocks CML-induced centrosome amplification, linking the recruitment axis to a defined upstream stimulus.

    Evidence siRNA/shRNA knockdown of CCDC116 in human hepatocytes with centrosome amplification assay under CML treatment

    PMID:41401801

    Open questions at the time
    • Molecular mechanism by which CCDC116 promotes overduplication is undefined
    • Whether the requirement generalizes beyond the CML/hepatocyte context is untested
    • No reciprocal validation of complex composition in an independent system

Open questions

Synthesis pass · forward-looking unresolved questions
  • The intrinsic biochemical activity of CCDC116 and how its centrosomal recruitment mechanistically triggers centriole overduplication remain unresolved.
  • No enzymatic or structural function assigned to CCDC116
  • Downstream effectors engaged by centrosomal CCDC116 unknown
  • No structural model of the phospho-CEP20–CCDC116 interface

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Localization
GO:0005815 microtubule organizing center 3
Pathway
R-HSA-1640170 Cell Cycle 2
Partners

Evidence

Reading pass · 3 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2014 CCDC116 was identified as a centrosome-associated protein in cultured mammalian cells, localized to the centrosome by mass spectrometry of sperm centrioles followed by assessment of localization in cultured cells. Mass spectrometry of sperm centrioles; localization assessment in cultured cells (immunofluorescence) Journal of cell science Medium 25074808
2025 CCDC116 is recruited to the centrosome downstream of a PLK1-CEP20 signaling axis: PLK1-dependent phosphorylation of CEP20 at Ser46 enables high-affinity CCDC116 binding and centrosomal recruitment, driving centriole overduplication. CCDC116 knockdown abolished centrosomal localization and centrosome amplification. Phosphorylation site mutagenesis (CEP20-S46A), CCDC116 knockdown, centrosome amplification quantification in human hepatocytes (THLE2/THLE3) Journal of agricultural and food chemistry Medium 41401801
2025 CCDC116 knockdown abolished centrosomal localization (of the CEP20-CCDC116 complex) and prevented centriole overduplication induced by CML (Nε-carboxymethyl-lysine), establishing CCDC116 as a required downstream effector for centrosome amplification in this pathway. siRNA/shRNA knockdown of CCDC116 in human hepatocytes; centrosome amplification assay Journal of agricultural and food chemistry Medium 41401801

Source papers

Stage 0 corpus · 7 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2014 Proteomic analysis of mammalian sperm cells identifies new components of the centrosome. Journal of cell science 93 25074808
2017 Integrating expression-related SNPs into genome-wide gene- and pathway-based analyses identified novel lung cancer susceptibility genes. International journal of cancer 16 29193083
2012 Expression of the coiled coil domain containing protein 116 in the pancreatic islets and endocrine pancreatic tumors. Islets 8 23072936
2017 A cis-eQTL genetic variant of the cancer-testis gene CCDC116 is associated with risk of multiple cancers. Human genetics 7 28653172
2026 Identifying expression and DNA methylation biomarkers for lung adenocarcinoma risk in East Asia. Journal of the National Cancer Institute 2 41581221
2026 Single-cell and multi-omics analyses identify CAMP-associated neutrophil remodeling during radiochemotherapy in cervical cancer. Frontiers in cell and developmental biology 0 41878161
2025 Nε-Carboxymethyl-Lysine Drives Centrosome Amplification and Hepatocarcinogenesis via Pathological Dysregulation of the PLK1-CEP20-CCDC116 Axis. Journal of agricultural and food chemistry 0 41401801

Missed literature

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