| 2001 |
CBP80 (NCBP1) is associated with newly synthesized mRNAs undergoing a 'pioneer' round of translation; NMD targets CBP80-bound mRNAs (not yet replaced by eIF4E), and the NMD-susceptible mRNP includes CBP20, PABP2, eIF4G, Upf2, and Upf3 as components. NMD of CBP80-bound mRNA is blocked by cycloheximide or suppressor tRNA, confirming translation-dependence. |
Antibody immunopurification of CBP80-bound vs. eIF4E-bound mRNPs; cycloheximide and suppressor tRNA inhibition assays |
Cell |
High |
11551508
|
| 2002 |
CBP80 (NCBP1), but not nuclear eIF4E, is detected in association with intron-containing RNA and the C-terminal domain of RNA polymerase II. The exon junction complex (EJC) components RNPS1, Y14, SRm160, REF/Aly, TAP, Upf3X, and Upf2 are detected on CBP80-bound mRNA in both nuclear and cytoplasmic fractions, but not on eIF4E-bound mRNA, indicating these proteins travel with CBP80-mRNPs after export. |
Immunoprecipitation of CBP80-bound vs. eIF4E-bound mRNPs; nuclear/cytoplasmic fractionation; Western blotting |
The EMBO journal |
High |
12093754
|
| 1995 |
NCBP1 (CBP80) interacts with three nuclear cap-binding protein interacting proteins (NIP1, NIP2, NIP3) identified by yeast two-hybrid; NCBP1 requires NIP1 (which has an RNP-type RNA binding domain) for binding to the cap structure. |
Yeast two-hybrid screen from HeLa cell cDNA library; cap-binding assay |
Nucleic acids research |
Medium |
7478990
|
| 2005 |
CBP80 (NCBP1) directly interacts with Upf1 and promotes the interaction of Upf1 with Upf2 during NMD, but does not promote Upf1 interaction with Stau1 (which mediates SMD). CBP80 augments the efficiency of NMD but not Staufen1-mediated mRNA decay (SMD). |
Co-immunoprecipitation; siRNA knockdown; NMD efficiency assays |
Nature structural & molecular biology |
High |
16186820
|
| 2005 |
CBP80 (NCBP1) and eIF4G share a common evolutionary origin and similar domain organization (consecutive HEAT domains). A structural model based on the CBP80-CBP20 crystal structure suggests conserved mutual orientation of domains relevant for translation initiation complex assembly. |
Computational domain analysis; structural modeling using known CBP80-CBP20 complex structure |
Biochemistry |
Low |
16156639
|
| 2009 |
CBP80 (NCBP1) directly interacts with CTIF (CBP80/20-dependent translation initiation factor), a new MIF4G domain-containing protein. CTIF is part of the CBP80/20-dependent translation initiation complex, and depletion of CTIF from an in vitro translation system selectively blocks translation of CBP80-bound mRNAs; addition of purified CTIF restores it. CTIF localizes to the perinuclear region, and its down-regulation abrogates NMD. |
Co-immunoprecipitation; in vitro translation system depletion/reconstitution; siRNA knockdown; confocal microscopy |
Genes & development |
High |
19648179
|
| 2010 |
UPF1 binding to CBP80 (NCBP1) promotes NMD at two distinct steps: (1) association of SMG1 and UPF1 with eukaryotic release factors (eRFs) during SURF complex formation at a premature termination codon, and (2) subsequent association of SMG1 and UPF1 with an exon-junction complex. UPF1 binds PTC-containing mRNA more efficiently than PTC-free mRNA in a manner promoted by the UPF1-CBP80 interaction. |
Dominant-negative mutant precluding UPF1-CBP80 interaction; co-immunoprecipitation; mRNA binding assays; NMD reporter assays |
Molecular cell |
High |
20691628
|
| 2009 |
CBP80 (NCBP1) is present in neuronal dendrites and associates with LSm1-mRNPs assembled in the nucleus; both LSm1 and CBP80 shift into dendritic spines upon stimulation of glutamatergic receptors, suggesting these CBP80-containing mRNPs are translationally activated during local protein synthesis. |
Immunofluorescence; subcellular fractionation; glutamatergic receptor stimulation; confocal microscopy |
The Journal of cell biology |
Medium |
19188494
|
| 2012 |
CTIF (CBP80/20-dependent translation initiation factor) specifically interacts with eIF3g (a component of the eIF3 ribosome-recruitment complex), bridging CBP80 and eIF3 to enable ribosome recruitment during CBP80/20-dependent translation. Down-regulation of CTIF redistributes CBP80 from polysome to subpolysome fractions without affecting eIF4E distribution. Artificial tethering of CTIF to an intercistronic region drives translation of the downstream cistron in an eIF3-dependent manner. |
Co-immunoprecipitation; polysome fractionation; siRNA knockdown; tethering assay; NMD reporter assay |
The Journal of biological chemistry |
High |
22493286
|
| 2015 |
NCBP1 (CBP80), but not NCBP2 (CBP20), is required for cell viability and poly(A) RNA nuclear export. NCBP1 forms an alternative cap-binding complex with NCBP3 (C17orf85) that binds mRNA, associates with mRNA processing machinery, and contributes to poly(A) RNA export. Loss of NCBP3 is compensated by NCBP2 under steady-state conditions but NCBP3 becomes critical under stress (e.g., virus infection). |
Knockdown/knockout viability assays; RNA export assays (FISH); mass spectrometry interactome; Co-immunoprecipitation |
Nature communications |
High |
26382858
|
| 2008 |
NMD triggered by EMCV IRES-initiated translation targets CBP80/20-bound mRNA but does not detectably target eIF4E-bound mRNA, establishing that even IRES-initiated translation undergoes a CBP80-associated pioneer round leading to NMD when translation terminates prematurely. |
NMD reporter assays with EMCV IRES constructs; immunoprecipitation of CBP80-bound vs. eIF4E-bound mRNA fractions |
EMBO reports |
Medium |
18369367
|
| 2011 |
In yeast, the CBP80 ortholog Cbc1/Sto1 associates with polysomes and is required for rapid translation reinitiation after osmotic stress. Deletion of CBC1 causes hypersensitivity to cycloheximide and synthetic sickness with limiting eIF4E. Osmostress-responsive mRNAs are transcriptionally induced in cbc1Δ cells but fail to rapidly associate with polysomes. Under osmotic stress, Cbc1 relocalizes from nucleus to cytoplasm. |
Polysome fractionation; genetic epistasis (cbc1Δ, eIF4E temperature-sensitive allele); cycloheximide sensitivity assay; live-cell localization |
Molecular biology of the cell |
High |
22072789
|
| 2011 |
Ago2 competes with CBP80/20 for cap association, thereby inhibiting CBP80/20-dependent translation (CT) and abrogating NMD that is coupled to CT. Tethering of Ago2 (but not of cap-association-deficient Ago2F2V2) to the 3'UTR of PTC-containing mRNA abrogates NMD. Immunoprecipitation with CBP80 antibody confirms that Ago2, but not Ago2F2V2, inhibits binding of CBP80/20 to the cap structure. |
Tethering assay; co-immunoprecipitation with CBP80 antibody; NMD reporter assay; Ago2 mutant (F2V2) |
FEBS letters |
Medium |
21840310
|
| 2018 |
CBP80 (NCBP1) binds the HIV-1 viral protein Rev and the unspliced full-length mRNA in both nucleus and cytoplasm. CBP80 supports Rev-mediated nuclear export and translation of the unspliced mRNA. Rev interacts with DEAD-box helicase eIF4AI, and the Rev/RRE axis is required for assembly of a CBP80-eIF4AI complex on the unspliced mRNA. |
Co-immunoprecipitation; RNA immunoprecipitation; translation and nuclear export assays; RIP |
Nucleic acids research |
Medium |
30239828
|
| 2010 |
In yeast, Cbp80 (NCBP1 ortholog) plays distinct roles in splicing: it promotes initial 5' splice site recognition by U1 snRNP and, independently, facilitates U2 snRNP recruitment in a manner dependent on sequences near the 5' splice site. Deletion of Cbp80 suppresses the splicing defect caused by a mutation in the RPL30 binding site that normally disrupts L30-mediated splicing repression. |
Genetic epistasis (cbp80 deletion suppressor screen); splicing assays |
RNA (New York, N.Y.) |
Medium |
20801768
|
| 2019 |
NCBP1 up-regulates CUL4B expression via interaction with NCBP3, constituting an NCBP1-NCBP3-CUL4B axis that promotes lung cancer cell growth. CUL4B silencing significantly reverses NCBP1-induced tumorigenesis in vitro. |
Co-immunoprecipitation; knockdown/overexpression; cell growth and migration assays; CUL4B rescue experiment |
Journal of cellular and molecular medicine |
Medium |
31448526
|
| 2019 |
In Drosophila, Cbp80 (NCBP1 ortholog) cooperates with Paip2 at active promoters to ensure proper RNA polymerase II CTD Ser5 phosphorylation, linking the cap-binding complex to transcription initiation/early elongation. |
Co-immunoprecipitation; ChIP; Pol II CTD phosphorylation assay; ~300 kDa complex characterization |
FEBS letters |
Medium |
31001806
|
| 2023 |
NCBP1 enhances the m6A catalytic function of METTL3 by maintaining METTL3 mRNA stabilization, leading to increased m6A modification of c-MYC mRNA and enhanced DLBCL cell proliferation via the NCBP1/METTL3/m6A/c-MYC axis. |
Co-immunoprecipitation; siRNA knockdown; m6A methylation assay; mRNA stability assay; cell proliferation assay |
Scientific reports |
Medium |
37244946
|
| 2024 |
NCBP1 is recruited by IGF2BP3 to inhibit CDK6 mRNA decay; IGF2BP3 recognizes m6A modification at the GGACU motif (nucleotides 110-114) in the 5'UTR of CDK6 mRNA and recruits NCBP1 to enhance CDK6 mRNA stability, thereby inhibiting renal tubular senescence. |
Co-immunoprecipitation (IP-MS); m6A site mapping; mRNA stability assay; siRNA knockdown; overexpression rescue |
Translational research |
Medium |
38945255
|
| 2026 |
NCBP1 propagates nuclear electrophile stress signals through a single cysteine residue (C436). Electrophile modification of NCBP1(C436) impairs association between NCBP1 and SF3A1 (an essential spliceosome component), triggering alternative splicing of >250 genes including S6 kinase, whose alternatively spliced isoform is sufficient to inhibit global protein translation. |
Precision localized electrophile generation; genetic code expansion; alternative splicing sequencing; Co-immunoprecipitation (NCBP1-SF3A1 interaction); site-directed mutagenesis (C436); polysome/translation assays |
Nature chemical biology |
High |
41667655
|
| 2026 |
Ncbp1 depletion in mouse embryos causes morula arrest with nuclear poly(A) RNA retention and downregulation of lipid metabolic pathways, notably SCD1 (stearoyl-CoA desaturase 1). Exogenous oleic acid supplementation partially rescues blastocyst formation, implicating NCBP1 in SCD1-OA-mediated lipid metabolic homeostasis during morula-to-blastocyst transition via its role in mRNA export. |
siRNA knockdown via zygotic microinjection; mRNA rescue (co-injection); poly(A) RNA FISH; RNA sequencing; quantitative proteomics; oleic acid rescue experiment |
Reproduction (Cambridge, England) |
Medium |
41575276
|
| 2020 |
CTIF inhibits HIV-1 Gag synthesis by associating with HIV-1 Rev through its N-terminal domain and being recruited onto the full-length RNA RNP complex. CTIF induces cytoplasmic accumulation of Rev, impeding Rev association with CBP80. Rev and CTIF compete for binding to CBP80, establishing a regulatory interplay between the CBC-dependent translation machinery and HIV-1 replication. |
Co-immunoprecipitation; subcellular fractionation; siRNA knockdown; translation reporter assays |
RNA biology |
Medium |
33103564
|
| 2017 |
In Drosophila, Cbp80 (NCBP1 ortholog) knockdown in the female germline leads to delocalization and reduced protein levels of the piRNA pathway factors Piwi, Aub, and Ago3, and impairs both primary piRNA biogenesis and the ping-pong secondary amplification cycle, without significantly altering piRNA precursor transcript levels or nuage localization. |
Germline-specific RNAi knockdown; small RNA sequencing; immunofluorescence for piRNA pathway factors |
PloS one |
Medium |
28746365
|