Affinage

CBLN1

Cerebellin-1 · UniProt P23435

Length
193 aa
Mass
21.1 kDa
Annotated
2026-06-09
38 papers in source corpus 25 papers cited in narrative 24 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 7/7 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CBLN1 is a secreted glycoprotein of the C1q superfamily that serves as the central organizing node of a trans-synaptic bridge: it physically links presynaptic neurexins on granule cell axons to the N-terminal domain of postsynaptic δ2-glutamate receptors (GluD2/GluRδ2) on Purkinje cells, thereby driving cerebellar parallel fiber–Purkinje cell synapse formation and maintenance (PMID:20537373, PMID:20395510, PMID:16234806). Genetic ablation phenocopies GluRδ2-null mice and abolishes synapse maintenance, climbing fiber innervation, and long-term depression, placing CBLN1 in the GluRδ2 signaling pathway (PMID:16234806), and recombinant CBLN1 acutely and reversibly restores parallel fiber synapses and rescues ataxia in cbln1-null animals (PMID:18524896). CBLN1 binds GluD2 through the receptor's flap loop (Arg321–Trp339), and divergence in C1q-domain loop CD dictates receptor selectivity, while neurexin engages the N-terminal region of the molecule (PMID:28877468, PMID:20599760). Engagement of the Nrxn–Cbln1–GluD2 complex bidirectionally organizes connectivity, inducing presynaptic differentiation and bouton maturation through positive feedback while simultaneously suppressing inhibitory interneuron–Purkinje cell synapses via a Src-family-kinase-sensitive mechanism, and shaping Purkinje dendritic morphogenesis through competition between inputs (PMID:20395510, PMID:23141067, PMID:24467251, PMID:33352118). The protein assembles into homomeric hexamers or Cbln3 heteromers governed by N-terminal cysteines and the C-terminal C1q domain, with proteolytic processing determining oligomeric state—only intact hexameric CBLN1 binds postsynaptic sites (PMID:10964938, PMID:16135095, PMID:19344768). CBLN1 is released from axonal lysosomes in an activity- and Ca2+-dependent manner, retained on the axon surface by neurexin, and accumulates at boutons via GluD2 (PMID:31072786). Beyond the cerebellum, CBLN1 acts earlier as an autocrine axon growth and guidance cue through neurexin-2 and as a determinant of corticospinal projection targeting, and it organizes hypothalamic and amygdalar excitatory circuits through NRXN1–CBLN1–GluD1 complexes relevant to sociability, aggression, and nociception; its expression is regulated by neuronal activity through L-type Ca2+ channels and calcineurin and by nuclear UBE3A-mediated repression (PMID:19403810, PMID:28297715, PMID:36395107, PMID:36909588, PMID:39890638, PMID:36823038).

Mechanistic history

Synthesis pass · year-by-year structured walk · 22 steps
  1. 2000 Medium

    Establishing the biochemical assembly principles of CBLN1 was the first question: how this secreted protein oligomerizes and whether it associates with related family members.

    Evidence Yeast two-hybrid with Cbln1 bait plus mammalian co-expression and binding specificity assays

    PMID:10964938

    Open questions at the time
    • Functional consequence of hexamer vs heteromer not resolved at this stage
    • Receptor partners unknown
    • Single lab, no structural data
  2. 2005 High

    In vivo loss-of-function defined CBLN1's physiological role, showing it is essential for cerebellar synapse maintenance and LTD and operates in the same pathway as GluRδ2.

    Evidence cbln1 knockout mice with genetic epistasis (phenocopy of GluRδ2-null), electrophysiology, morphology

    PMID:16234806

    Open questions at the time
    • Molecular receptor not yet identified
    • Mechanism of action (direct binding) not yet shown
    • Did not establish trans-synaptic bridging
  3. 2005 Medium

    Proteolytic processing was shown to control which oligomeric form is released, linking biochemistry to biological activity.

    Evidence Biochemical cleavage mapping of cerebellar lysates, yeast two-hybrid, mammalian expression

    PMID:16135095

    Open questions at the time
    • Identity of the protease(s) not determined
    • In vivo relevance of cleavage forms not established
    • Single lab
  4. 2006 High

    The interdependence of CBLN1 and CBLN3 secretion was resolved, defining a reciprocal stability/secretion relationship and a structural ER-retention mechanism.

    Evidence cbln1/cbln3 single and double knockout mice, structural modeling, mutation analysis, secretion assays

    PMID:17030622

    Open questions at the time
    • Mechanism applies to cerebellar context; generality unclear
    • Functional role of the heteromer in synaptogenesis not isolated
  5. 2007 Medium

    Subcellular localization placed CBLN1 in the endolysosomal compartment rather than the conventional ER/Golgi secretory route, foreshadowing an unconventional release mechanism.

    Evidence Immunohistochemistry with organelle markers, cbln1-lacZ and cbln3-null mice, fractionation

    PMID:18001291

    Open questions at the time
    • Release mechanism not yet defined
    • Co-localization-based, single lab
  6. 2008 High

    Recombinant-protein reconstitution proved CBLN1 is the sufficient extracellular factor for synapse formation, establishing it as a soluble synaptogenic cue.

    Evidence Dissociated cbln1-null Purkinje cultures, acute slices, in vivo injection, electrophysiology, EM, behavior

    PMID:18524896

    Open questions at the time
    • Presynaptic partner not yet identified
    • Transient rescue mechanism unexplained
  7. 2009 Medium

    Ultrastructural and trafficking studies localized intact hexameric CBLN1 to the parallel fiber synaptic cleft and demonstrated anterograde trans-neuronal transport requiring GluRδ2.

    Evidence Immunogold EM, binding assays with domain mutants in mutant cerebellum, transgenic and GluRδ2-null mice, fractionation

    PMID:19200061 PMID:19250438 PMID:19344768

    Open questions at the time
    • Mechanism of GluRδ2-dependent uptake unresolved
    • Functional role of trans-neuronal transport unclear
  8. 2009 Medium

    Activity-dependent regulation of cbln1 transcription was established, linking neuronal activity to synapse number via CBLN1 levels.

    Evidence Granule cell cultures with pharmacology (K+, kainate, L-type Ca2+/calcineurin blockers), qRT-PCR, synapse counting, rescue

    PMID:19403810

    Open questions at the time
    • Transcription factor downstream of calcineurin not identified
    • In vivo activity dependence not directly shown
  9. 2010 High

    The central mechanistic advance: CBLN1 directly binds the GluD2 N-terminal domain and bridges presynaptic neurexins to postsynaptic GluD2, defining the tripartite trans-synaptic organizer and its bidirectional, necessary-and-sufficient synaptogenic activity.

    Evidence cbln1-null cultures, recombinant rescue, NRXN knockdown, domain competition, bead reconstitution, in vivo synapse induction

    PMID:20395510 PMID:20537373

    Open questions at the time
    • Atomic-resolution structure of the complex not yet available
    • Mechanism of presynaptic differentiation downstream unknown
  10. 2010 Medium

    Fine-mapping identified the GluD2 flap loop (Arg321–Trp339) as the CBLN1-binding determinant, linking a specific receptor motif to synaptogenic function.

    Evidence HEK cell GluD2 NTD mutagenesis, Cbln1 binding and presynaptic differentiation assays, homology modeling

    PMID:20599760

    Open questions at the time
    • Single lab, reciprocal CBLN1 binding residues not mapped here
    • No co-crystal structure
  11. 2012 High

    Live imaging defined the dynamic cell-biological output of the complex, showing presynaptic structural remodeling and a positive-feedback loop driving synapse maturation.

    Evidence Time-lapse organotypic imaging, in vivo ultrastructure, GluD2/Nrx genetic epistasis

    PMID:23141067

    Open questions at the time
    • Signaling components of the feedback loop not identified
    • Cytoskeletal effectors unknown
  12. 2012 Medium

    Cross-family redundancy was tested, showing Cbln2 can substitute for CBLN1 in the cerebellum but not in thalamostriatal circuits, revealing region-specific mechanisms.

    Evidence Binding assays, Cbln2 transgenic rescue of cbln1-null mice, cbln2 knockout, synaptic analysis

    PMID:22117778

    Open questions at the time
    • Molecular basis of region-specific non-redundancy unknown
    • Receptor differences in thalamus undefined
  13. 2014 High

    The organizer was shown to act bidirectionally on connectivity, with Cbln1–GluD2 signaling actively suppressing inhibitory synapses through a Src-family kinase pathway.

    Evidence Patch-clamp in slices, vGAT immunohistochemistry, recombinant rescue, cbln1/GluD2 double-null epistasis, Src inhibitors

    PMID:24467251

    Open questions at the time
    • Src substrate mediating inhibitory suppression not identified
    • Mechanism linking GluD2 to tyrosine phosphorylation unclear
  14. 2017 High

    Structural biology resolved the C1q-domain architecture and the basis of receptor selectivity, showing loop CD governs GluD2 binding and that neurexin engages the N-terminal region.

    Evidence X-ray crystallography of Cbln1/Cbln4 C1q domains, negative-stain EM of hexamer and Cbln4/Nrxn1β complex, binding assays

    PMID:28877468

    Open questions at the time
    • Full tripartite complex structure not solved
    • Low-resolution EM of hexamer leaves quaternary detail unresolved
  15. 2017 High

    CBLN1 was placed in a transcriptional regulatory and behavioral circuit, with nuclear UBE3A repressing cbln1 in VTA glutamatergic neurons to control sociability.

    Evidence Conditional deletion/overexpression, viral Cbln1 restoration, chemogenetics, behavior, electrophysiology

    PMID:28297715

    Open questions at the time
    • Direct vs indirect transcriptional mechanism of UBE3A on cbln1 not resolved
    • Receptor partner in VTA circuit not defined here
  16. 2019 High

    The unconventional release route was defined: CBLN1 is exocytosed from axonal lysosomes in an activity/Ca2+-dependent manner, then captured by neurexin and concentrated at boutons via GluD2.

    Evidence Live-cell exocytosis imaging, tetanus toxin and lysosome-disruption pharmacology, Neu1 overexpression, in vivo bouton analysis

    PMID:31072786

    Open questions at the time
    • Trigger coupling activity to lysosomal fusion not identified
    • Role of co-released cathepsin B unclear
  17. 2020 High

    CBLN1/GluD2 signaling was shown to drive competitive, synaptotrophic shaping of Purkinje dendritic arbors, extending its role from synapse counting to circuit morphogenesis.

    Evidence Sparse vs global GluD2 conditional knockout, overexpression, structure-function, epistasis, computational modeling

    PMID:33352118

    Open questions at the time
    • Molecular signal converting synaptic competition to dendritic growth unknown
  18. 2022 Medium

    A developmentally earlier function was uncovered: CBLN1 acts as an autocrine axon growth and attractive guidance cue signaling through neurexin-2, distinct from its synaptogenic role.

    Evidence Mouse and chick loss/gain-of-function in developing spinal cord, Nrxn2 receptor identification by epistasis and binding

    PMID:36395107

    Open questions at the time
    • Downstream signaling of Nrxn2 in axon growth undefined
    • How the same protein switches between guidance and synaptogenic modes unclear
  19. 2023 Medium

    CBLN1 was shown to be a determinant of corticospinal axon segmental targeting, broadening its role in projection specificity.

    Evidence In utero electroporation, AAV postmitotic delivery, axon tracing, gain-of-function

    PMID:36823038

    Open questions at the time
    • Receptor mediating segmental targeting not identified
    • Endogenous loss-of-function not tested
  20. 2023 Medium

    The trans-synaptic module was extended to hypothalamic circuits, with an NRXN1–CBLN1–GluD1 complex organizing VMHvl-to-arcuate excitatory synapses controlling aggression, downstream of UBE3A repression.

    Evidence Conditional deletion, chemo/optogenetics, behavior, synapse analysis (preprint)

    PMID:36909588

    Open questions at the time
    • Preprint, not peer-reviewed
    • Direct CBLN1–GluD1 binding in this circuit not biochemically isolated here
  21. 2023 Low

    A post-transcriptional control layer was proposed, implicating YTHDF3/BTG2 in m6A-dependent decay of cbln1 mRNA.

    Evidence Co-IP (YTHDF3-BTG2), mRNA decay assays, hippocampal expression in prenatal hypoxia model

    PMID:38205248

    Open questions at the time
    • Single Co-IP without reciprocal validation; direct m6A marking of cbln1 not demonstrated
    • Functional synaptic consequence not shown
    • Single lab
  22. 2025 Medium

    A small-molecule modulator of the complex was identified, with D-serine inhibiting CBLN1–GluD1 interaction and dampening CBLN1-driven excitatory transmission and nociception in the central amygdala.

    Evidence In vitro cell-binding assay, ex vivo CeA slice electrophysiology, in vivo intra-CeA injection with behavioral readout

    PMID:39890638

    Open questions at the time
    • Binding site of D-serine on GluD1 not mapped
    • Physiological D-serine concentrations relative to IC50 unclear
    • Single lab

Open questions

Synthesis pass · forward-looking unresolved questions
  • How CBLN1's distinct functional modes—autocrine axon guidance, region-specific synaptogenesis, and bidirectional excitatory/inhibitory organization—are selected by receptor context, oligomeric state, and proteolytic processing remains unresolved.
  • No atomic structure of the full Nrxn–Cbln1–GluD complex
  • Proteases controlling oligomeric state in vivo unidentified
  • Signal transduction downstream of GluD receptors after CBLN1 binding largely uncharacterized

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0048018 receptor ligand activity 4 GO:0060089 molecular transducer activity 3 GO:0060090 molecular adaptor activity 3 GO:0005198 structural molecule activity 2
Localization
GO:0005576 extracellular region 3 GO:0005764 lysosome 2 GO:0005768 endosome 2
Pathway
R-HSA-112316 Neuronal System 5 R-HSA-1266738 Developmental Biology 3 R-HSA-1500931 Cell-Cell communication 3
Complex memberships
Cbln1 homohexamerCbln1–Cbln3 heteromerNRXN1–CBLN1–GluD1 trans-synaptic complexNrxn–Cbln1–GluD2 trans-synaptic complex

Evidence

Reading pass · 24 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2010 Cbln1 forms a trans-synaptic tripartite complex bridging presynaptic neurexins (NRXNs) on granule cells to the N-terminal domain (NTD) of postsynaptic GluRδ2 (GluD2) on Purkinje cells, mediating cerebellar synapse formation. Synaptogenic activity of GluD2 is abolished in cbln1-null cultures and restored by recombinant Cbln1; knockdown of NRXNs in granule cells also abolishes the synaptogenic activity. Soluble NTD of GluD2 and extracellular domain of NRXN1β each suppress Cbln1 synaptogenic activity in vitro and in vivo. Cerebellar primary cultures from cbln1-null mice, recombinant Cbln1 rescue, NRXN knockdown, competitive inhibition with soluble domain fragments, in vivo injection Cell High 20537373
2010 Cbln1 directly binds the N-terminal domain of GluD2 (the orphan glutamate receptor). The Cbln1–GluD2 complex acts as a bidirectional synapse organizer: Cbln1-coated beads directly induce presynaptic differentiation and indirectly cause postsynaptic molecule clustering via GluD2. GluD2 postsynaptic expression combined with exogenous Cbln1 is necessary and sufficient to induce new synapses in vitro and in adult cerebellum in vivo. Direct binding assays, bead-coated recombinant Cbln1 synaptogenesis assay, in vitro and in vivo synapse induction experiments Science High 20395510
2005 Cbln1 is a glycoprotein secreted from cerebellar granule cells that is essential for (1) maintaining pre- and postsynaptic elements at parallel fiber–Purkinje cell synapses, (2) establishing proper climbing fiber–Purkinje cell innervation, and (3) induction of long-term depression at parallel fiber–Purkinje cell synapses. cbln1-null mice phenocopy GluRδ2-null mice, establishing Cbln1 in the same signaling pathway as GluRδ2. cbln1 knockout mice, genetic epistasis (phenocopy of GluRδ2-null), electrophysiology (LTD), morphological analysis Nature Neuroscience High 16234806
2000 Cbln1 forms homomeric hexameric complexes and also interacts specifically with Cbln3 to form heteromeric complexes, mediated by conserved N-terminal cysteine residues (for higher-order oligomerization) and the C-terminal C1q domain (for trimerization). C1qB binds to neither Cbln1 nor Cbln3, demonstrating specificity. Cbln3 cannot form stable homomers. Yeast two-hybrid screen using Cbln1 as bait, mammalian co-expression, binding specificity assays The Journal of Neuroscience Medium 10964938
2005 Cbln1 undergoes proteolytic processing in the synaptic compartment. Only uncleaved Cbln1 (containing the cerebellin motif) is released and assembles into hexameric complexes. Cleavage at the N-terminus of the cerebellin sequence yields trimeric complexes by separating the C-terminal C1q domain from N-terminal cysteine residues. Cleavage at the C-terminus of the cerebellin motif disrupts the C1q domain and abolishes subunit interactions. Biochemical analysis of cerebellar lysates, yeast two-hybrid, mammalian expression systems, protease cleavage mapping Journal of Neurochemistry Medium 16135095
2006 Cbln1 is secreted from cerebellar granule cells in complex with Cbln3. Cbln1 and Cbln3 reciprocally regulate each other's degradation and secretion: cbln1-null mice lack both Cbln1 and Cbln3, whereas cbln3-null mice lack Cbln3 but have ~6-fold increased Cbln1. Cbln3 cannot form homomers and is secreted only when bound to Cbln1. A single arginine residue in Cbln3 causes ER retention via steric clash that is masked upon Cbln1 binding ('hide-and-run' mechanism). cbln1 and cbln3 knockout mice and double knockouts, structural modeling, mutation analysis, biochemical secretion assays Molecular and Cellular Biology High 17030622
2008 Recombinant Cbln1 specifically and reversibly induces parallel fiber (PF) synapse formation in dissociated cbln1-null Purkinje cells in culture and rapidly induces functional, ultrastructurally normal PF synapses in acute cbln1-null cerebellar slices. A single injection of recombinant Cbln1 in adult cbln1-null mice in vivo completely but transiently restores PF synapses and rescues ataxia. Dissociated cbln1-null Purkinje cell cultures, acute slice preparations, in vivo injection of recombinant Cbln1, electrophysiology, electron microscopy The Journal of Neuroscience High 18524896
2007 Cbln1 is localized to the endolysosomal compartment of neurons (co-localizing with cathepsin D, a lysosomal marker) but not to ER or Golgi. In cbln3-null cerebellum, Cbln1 immunoreactivity increases dramatically, while it is unchanged in extracerebellar neurons, indicating that Cbln3 regulates Cbln1 levels specifically in the cerebellum via the endolysosomal pathway. Immunohistochemistry with organelle markers, cbln1-lacZ transgenic mice, cbln3-null mice, subcellular fractionation European Journal of Neuroscience Medium 18001291
2009 Cbln1 accumulates specifically in the synaptic cleft of parallel fiber–Purkinje cell synapses (not other PC synapses), co-localizing with Cbln3 and GluRδ2 at these synapses. Intact hexameric Cbln1 specifically binds to postsynaptic sites; neither N-terminal nor C-terminal fragments alone, nor trimeric mutant Cbln1, support specific binding. Cbln1 binding site is located on postsynaptic (Purkinje cell) rather than presynaptic elements. Postembedding immunogold electron microscopy, pepsin antigen retrieval, binding assays with recombinant Cbln1 in weaver and pcd mutant cerebellum, subcellular fractionation European Journal of Neuroscience High 19200061 19250438
2009 Cbln1 undergoes anterograde trans-neuronal transport from granule cells to Purkinje cells and Bergmann glia, entering the endolysosomal trafficking system. Cbln1 is absent in Purkinje cells and Bergmann glia of GluRδ2-null mice, suggesting GluRδ2 is required for Cbln1 trafficking into postsynaptic cells. Ectopic Cbln1 expression in Purkinje cells (L7-cbln1 transgene) partially rescues locomotor deficits of cbln1-null mice. Immunohistochemistry in transgenic and GluRδ2-null mice, L7-cbln1 transgenic mice, behavioral analysis Molecular and Cellular Neurosciences Medium 19344768
2009 Neuronal activity (elevated K+ or kainate) decreases cbln1 mRNA expression in mature granule cells within hours, in a manner dependent on L-type voltage-dependent Ca2+ channels and calcineurin. Chronic activity also reduces Cbln1 protein levels, accompanied by reduction of excitatory synapses on Purkinje cell dendrites; this activity-induced synapse reduction is prevented by exogenous Cbln1. Granule cell cultures with pharmacological manipulation (K+, kainate, L-type Ca2+ channel blockers, calcineurin inhibitors), qRT-PCR, immunohistochemistry, synapse counting The Journal of Neuroscience Medium 19403810
2012 Cbln1 released from parallel fibers induces dynamic structural changes (protrusions forming circular structures that encapsulate Purkinje cell spines) in presynaptic parallel fibers through a mechanism requiring postsynaptic GluD2 and presynaptic neurexin (Nrx). Nrx–Cbln1–GluD2 signaling induces accumulation of synaptic vesicles and GluD2, leading to mature synapse formation via a positive feedback mechanism. Time-lapse imaging in organotypic culture, ultrastructural analysis in vivo, genetic manipulation (GluD2/Nrx ablation) Neuron High 23141067
2012 Cbln1 and Cbln2 have similar binding activities to β-neurexins and Grid2 (GluD2). Ectopic Cbln2 expression in Purkinje cells of transgenic mice rescues cerebellar deficits in cbln1-null mice, demonstrating functional redundancy mediated by common receptor binding properties. However, Cbln2 does not substitute for Cbln1 in thalamic neurons affecting striatal synapses, implying region-specific receptor/mechanism differences. Binding assays, Cbln2 transgenic rescue of cbln1-null mice, cbln2 knockout mice, synaptic analysis Journal of Neurochemistry Medium 22117778
2014 Cbln1–GluD2 signaling downregulates the formation and function of inhibitory synapses between Purkinje cells and interneurons. cbln1-null cerebellum shows increased density of interneuron–Purkinje cell inhibitory synapses and increased amplitude and frequency of miniature IPSCs. Recombinant Cbln1 reverses increased inhibitory currents and synapse density; this effect is absent in cbln1/GluD2 double-null mice. Tyrosine phosphorylation is upregulated in cbln1-null cerebellum, and Src-family kinase inhibition suppresses increased IPSCs. Immunohistochemistry (vGAT antibody), whole-cell patch-clamp in cerebellar slices, recombinant Cbln1 rescue, double-knockout epistasis, Src kinase inhibitors European Journal of Neuroscience High 24467251
2017 Crystal structures of the homotrimeric C1q domains of Cbln1 and Cbln4 resolved at 2.2 Å and 2.3 Å, respectively, reveal that divergence in loop CD accounts for the difference in GluD2 binding between Cbln1 and Cbln4. Negative-stain EM reconstruction of hexameric full-length Cbln1 at 13 Å and Cbln4/Nrxn1β complex at 19 Å shows that Nrxn1β binds to the N-terminal region of Cbln4 (through strand β10 of S4 insert). Cbln4 binds Nrxn1β and forms a stable complex with the LNS domain of Nrxn1β despite not binding GluD2. X-ray crystallography, negative-stain electron microscopy, binding assays Cell Reports High 28877468
2019 Cbln1 is released from lysosomes in axons (but not dendrites) of cerebellar granule cells in an activity- and Ca2+-dependent manner. Released Cbln1 is retained on axonal surfaces by binding to presynaptic neurexin, then diffuses laterally and accumulates at boutons by binding postsynaptic δ2 glutamate receptors. Cbln1 exocytosis is insensitive to tetanus neurotoxin, is accompanied by cathepsin B release, and is decreased by lysosome disruption. Overexpression of lysosomal sialidase Neu1 inhibits Cbln1 and cathepsin B exocytosis and reduces axonal bouton formation in vivo. Live-cell imaging of Cbln1 exocytosis, pharmacological manipulation (tetanus neurotoxin, lysosome disruptors), Neu1 overexpression, in vivo bouton analysis Neuron High 31072786
2017 UBE3A (a ubiquitin ligase with transcriptional co-regulatory functions), when overexpressed in the nucleus in VTA glutamatergic neurons, downregulates Cbln1 expression. Cbln1 deletion in VTA glutamatergic neurons impairs sociability and weakens glutamatergic transmission. Viral vector-based restoration of Cbln1 in VTA glutamatergic neurons reverses sociability deficits induced by Ube3a overexpression and/or seizures. In vivo mouse genetics, conditional gene deletion/overexpression, viral vector-based Cbln1 restoration, chemogenetic activation, behavioral testing, electrophysiology Nature High 28297715
2010 The flap loop (Arg321–Trp339) in the N-terminal domain of GluD2 is the critical region for binding to Cbln1 and induction of presynaptic differentiation. Mutations in flap loop residues, including single amino acid substitutions of Arg321 or Trp323 to alanine, abolish both Cbln1 binding and presynaptic differentiation induction in HEK cells expressing GluD2. HEK cell expression, mutagenesis of GluD2 NTD, Cbln1 binding assay, presynaptic differentiation assay, homology modeling Biochemical and Biophysical Research Communications Medium 20599760
2020 Cbln1/GluD2-dependent competitive interactions shape Purkinje cell dendritic arbor morphogenesis. Sparse but not global GluD2 knockout causes under-elaboration of Purkinje cell dendrites in the deep molecular layer and overelaboration in the superficial molecular layer, demonstrating that competition between granule cell inputs via Cbln1/GluD2 is required for normal dendritic development. Developmental and genetic epistasis analyses confirm this is a synaptotrophic mechanism. Sparse and global GluD2 conditional knockout, developmental analysis, GluD2 overexpression, structure-function analysis, genetic epistasis, computational modeling Neuron High 33352118
2022 Cbln1 functions as an axon growth and guidance cue during early neural development (distinct from its later synaptogenic role), acting in an autocrine manner on commissural neuron axons to promote axon growth. Cbln1 also acts as an attractive guidance cue from intermediate target tissues. These functions are mediated by neurexin-2 (Nrxn2) as the Cbln1 receptor for axon growth and guidance. Cbln1 also regulates cerebellar parallel fiber growth and retinal ganglion cell axon guidance. Mouse and chick embryo experiments, loss-of-function and gain-of-function in developing spinal cord, identification of Nrxn2 as receptor by genetic epistasis and binding assays PLoS Biology Medium 36395107
2023 UBE3A impairs excitatory VMHvl-to-arcuate synapse formation by decreasing Cbln1 gene expression. This synapse is organized by an NRXN1–CBLN1–GluD1 transsynaptic complex. Targeted deletion of Grid1 (GluD1) in arcuate AgRP neurons impairs VMHvl-to-AgRP/NPY excitatory synapses. Chemogenetic/optogenetic activation of arcuate AgRP/NPY neurons inhibits VMHvl neurons and represses aggression, placing the NRXN1–CBLN1–GluD1 complex in a hypothalamic circuit regulating aggression. Conditional gene deletion, chemogenetic and optogenetic manipulation, behavioral testing, synapse analysis in mouse brain bioRxivpreprint Medium 36909588
2025 D-serine inhibits the interaction between Cbln1 and GluD1 in a concentration-dependent manner (IC50 ~300 µM) in an in vitro cell-binding assay. In ex vivo central amygdala slices, recombinant Cbln1 increases excitatory neurotransmission and GluD1 expression; this effect is partially blocked by D-serine pre-treatment. The pro-nociceptive behavioral effect of intra-CeA Cbln1 injection is inhibited by D-serine. In vitro cell-binding assay, ex vivo CeA slice electrophysiology, in vivo intra-CeA injection with behavioral readout Cellular and Molecular Life Sciences Medium 39890638
2023 YTHDF3 interacts with BTG2 and is involved in the decay of Cbln1 mRNA in the hippocampus, leading to downregulation of Cbln1 protein expression. This identifies YTHDF3/BTG2 as an m6A-dependent post-transcriptional regulatory mechanism controlling Cbln1 levels. Co-immunoprecipitation (YTHDF3-BTG2 interaction), mRNA decay assays, hippocampal gene expression analysis in prenatal hypoxia model iScience Low 38205248
2023 Cbln1 expressed by CSN subpopulations is sufficient to direct axon extension toward thoraco-lumbar spinal segments. Gain-of-function misexpression of Cbln1 in CSNBC-lat neurons (which normally project only to bulbar-cervical segments) redirects their axons past normal targets toward thoracic segments, demonstrating that Cbln1 is a molecular determinant of segmentally specific corticospinal axon projection targeting. In utero electroporation, AAV-mediated postmitotic gene delivery, axon tracing in mouse brain, gain-of-function experiments The Journal of Neuroscience Medium 36823038

Source papers

Stage 0 corpus · 38 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2010 Trans-synaptic interaction of GluRdelta2 and Neurexin through Cbln1 mediates synapse formation in the cerebellum. Cell 406 20537373
2010 Cbln1 is a ligand for an orphan glutamate receptor delta2, a bidirectional synapse organizer. Science (New York, N.Y.) 292 20395510
2005 Cbln1 is essential for synaptic integrity and plasticity in the cerebellum. Nature neuroscience 269 16234806
2017 Autism gene Ube3a and seizures impair sociability by repressing VTA Cbln1. Nature 121 28297715
2008 Cbln1 regulates rapid formation and maintenance of excitatory synapses in mature cerebellar Purkinje cells in vitro and in vivo. The Journal of neuroscience : the official journal of the Society for Neuroscience 87 18524896
2000 Cbln3, a novel member of the precerebellin family that binds specifically to Cbln1. The Journal of neuroscience : the official journal of the Society for Neuroscience 68 10964938
2005 The structure and proteolytic processing of Cbln1 complexes. Journal of neurochemistry 62 16135095
2011 Cbln1 and its family proteins in synapse formation and maintenance. Current opinion in neurobiology 55 21342763
2016 Roles of Cbln1 in Non-Motor Functions of Mice. The Journal of neuroscience : the official journal of the Society for Neuroscience 52 27852787
2006 Cbln1 is essential for interaction-dependent secretion of Cbln3. Molecular and cellular biology 49 17030622
2012 Presynaptically released Cbln1 induces dynamic axonal structural changes by interacting with GluD2 during cerebellar synapse formation. Neuron 48 23141067
2019 Activity-Dependent Secretion of Synaptic Organizer Cbln1 from Lysosomes in Granule Cell Axons. Neuron 44 31072786
2020 GluD2- and Cbln1-mediated competitive interactions shape the dendritic arbors of cerebellar Purkinje cells. Neuron 38 33352118
2008 New (but old) molecules regulating synapse integrity and plasticity: Cbln1 and the delta2 glutamate receptor. Neuroscience 37 19124061
2009 Cbln1 accumulates and colocalizes with Cbln3 and GluRdelta2 at parallel fiber-Purkinje cell synapses in the mouse cerebellum. The European journal of neuroscience 31 19250438
2009 Activity-dependent repression of Cbln1 expression: mechanism for developmental and homeostatic regulation of synapses in the cerebellum. The Journal of neuroscience : the official journal of the Society for Neuroscience 31 19403810
2007 Mapping of Cbln1-like immunoreactivity in adult and developing mouse brain and its localization to the endolysosomal compartment of neurons. The European journal of neuroscience 31 18001291
2012 Comparison of Cbln1 and Cbln2 functions using transgenic and knockout mice. Journal of neurochemistry 30 22117778
2013 Reevaluation of the role of parallel fiber synapses in delay eyeblink conditioning in mice using Cbln1 as a tool. Frontiers in neural circuits 21 24298240
2017 Cbln1 and Cbln4 Are Structurally Similar but Differ in GluD2 Binding Interactions. Cell reports 18 28877468
2012 Cbln1 and the δ2 glutamate receptor--an orphan ligand and an orphan receptor find their partners. Cerebellum (London, England) 16 20535596
2022 Cbln1 regulates axon growth and guidance in multiple neural regions. PLoS biology 14 36395107
2021 Long noncoding RNA PM maintains cerebellar synaptic integrity and Cbln1 activation via Pax6/Mll1-mediated H3K4me3. PLoS biology 14 34111112
2014 The role of Cbln1 on Purkinje cell synapse formation. Neuroscience research 14 24607546
2014 Cbln1 downregulates the formation and function of inhibitory synapses in mouse cerebellar Purkinje cells. The European journal of neuroscience 13 24467251
2009 Characterization of trans-neuronal trafficking of Cbln1. Molecular and cellular neurosciences 12 19344768
2023 Cbln1 Directs Axon Targeting by Corticospinal Neurons Specifically toward Thoraco-Lumbar Spinal Cord. The Journal of neuroscience : the official journal of the Society for Neuroscience 11 36823038
2009 Cbln1 binds to specific postsynaptic sites at parallel fiber-Purkinje cell synapses in the cerebellum. The European journal of neuroscience 11 19200061
2018 Improvement of cerebellar ataxic gait by injecting Cbln1 into the cerebellum of cbln1-null mice. Scientific reports 9 29670152
2025 D-Serine disrupts Cbln1 and GluD1 interaction and affects Cbln1-dependent synaptic effects and nocifensive responses in the central amygdala. Cellular and molecular life sciences : CMLS 7 39890638
2023 YTHDF3 modulates the Cbln1 level by recruiting BTG2 and is implicated in the impaired cognition of prenatal hypoxia offspring. iScience 7 38205248
2018 Evidence for generative homology of cerebellum and cerebellum-like structures in an elasmobranch fish based on Pax6, Cbln1 and Grid2 expression. The Journal of comparative neurology 7 29888788
2010 Flap loop of GluD2 binds to Cbln1 and induces presynaptic differentiation. Biochemical and biophysical research communications 7 20599760
2025 Trans-synaptic signaling through GRID1/glutamate receptor delta-1 and CBLN1/cerebellin-1 facilitates autophagic flux in central amygdala and prevents chronic pain. Autophagy 5 41147487
2016 Developmental Hypothyroxinemia and Hypothyroidism Reduce Parallel Fiber-Purkinje Cell Synapses in Rat Offspring by Downregulation of Neurexin1/Cbln1/GluD2 Tripartite Complex. Biological trace element research 4 27033232
2021 Family-Based Cohort Association Study of PRKCB1, CBLN1 and KCNMB4 Gene Polymorphisms and Autism in Polish Population. Journal of autism and developmental disorders 3 34562210
2023 UBE3A and transsynaptic complex NRXN1-CBLN1-GluD1 in a hypothalamic VMHvl-arcuate feedback circuit regulates aggression. bioRxiv : the preprint server for biology 2 36909588
2026 CBLN1 inhibits the inflammatory response by targeting GluD1 thereby alleviating resiniferatoxin-induced postherpetic neuralgia in mice. Journal of neuropathology and experimental neurology 0 41144370

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