Affinage

CATSPER3

Cation channel sperm-associated protein 3 · UniProt Q86XQ3

Length
398 aa
Mass
46.4 kDa
Annotated
2026-06-09
51 papers in source corpus 6 papers cited in narrative 6 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CATSPER3 is an essential pore-forming subunit of the sperm-specific CatSper Ca2+-selective channel that drives the flagellar Ca2+ entry underlying capacitation-dependent hyperactivated motility and male fertility (PMID:17227845, PMID:17344468). It assembles into a heterotetrameric channel through direct interactions with CatSper1, 2, and 4, contributing one channel-forming domain with a pore-loop and a C-terminal coiled-coil (PMID:17227845). Targeted disruption in mice abolishes the alkalinization-activated voltage-sensitive ICatSper current and hyperactivated motility specifically under capacitating conditions, rendering males completely infertile while leaving spermatogenesis and initial motility intact (PMID:17227845, PMID:17344468). In humans, a homozygous loss-of-function variant (p.L236*) causes infertility through failure of the sperm acrosome reaction with otherwise normal semen parameters, establishing a Mendelian link to the channel's downstream role in Ca2+-dependent sperm function (PMID:33350607). Testis-specific transcription of Catsper3 is driven by a TATA-less, DPE-independent core promoter at which the CRE-binding factors CREMτ and CREBA bind two CRE sites to transactivate expression in a tissue-restricted manner (PMID:40865603). The channel function is conserved beyond mammals, with the ascidian ortholog localizing to sperm flagella and supporting basic motility and chemotaxis (PMID:38020915).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2003 Low

    Before functional study, it was unknown whether CatSper3 had the architecture of a channel subunit; sequence analysis established it as a candidate pore-forming member of the CatSper family.

    Evidence In silico gene prediction, domain analysis, and RT-PCR in testis

    PMID:12932298

    Open questions at the time
    • Computational prediction only — no functional reconstitution or mutagenesis
    • Pore-loop and coiled-coil assignments inferred from consensus motifs, not tested
    • No demonstration of channel activity or assembly
  2. 2007 High

    It was unknown whether CatSper3 was a functional channel component; knockout demonstrated it is required for the ICatSper current, hyperactivated motility, and fertility, and that it physically assembles with the other three CatSper subunits.

    Evidence Targeted gene knockout in mouse, patch-clamp electrophysiology of ICatSper, sperm motility assays, and co-immunoprecipitation of all four CatSper subunits

    PMID:17227845

    Open questions at the time
    • Did not resolve the stoichiometry or structure of the assembled channel
    • Did not define how CatSper3 contributes to ion selectivity versus other subunits
    • Acrosome reaction not assessed
  3. 2007 High

    An independent knockout established that the motility defect is specific to capacitating conditions, defining CATSPER3 as essential for capacitation-dependent hyperactivation.

    Evidence Independent mouse knockout with motility analysis under capacitating vs. non-capacitating conditions and fertility assays

    PMID:17344468

    Open questions at the time
    • Did not address upstream signals coupling capacitation to channel activation
    • No human relevance established in this study
  4. 2023 Medium

    The conservation and breadth of CatSper3 function were unclear; ascidian knockout showed the ortholog localizes to the flagellum and supports basic motility and chemotaxis, indicating a deeply conserved flagellar role.

    Evidence CRISPR knockout, motility and chemotaxis assays, and immunostaining localization in Ciona intestinalis

    PMID:38020915

    Open questions at the time
    • Invertebrate ortholog, single lab — mammalian chemotaxis role not directly tested
    • No electrophysiological confirmation of channel activity in this system
  5. 2020 Medium

    Human relevance was unestablished; a homozygous loss-of-function variant in an infertile man linked CATSPER3 to failure of the acrosome reaction, extending its required role to human sperm function.

    Evidence Whole-exome and Sanger sequencing with anti-CD46 immunofluorescence acrosome reaction assay in one patient

    PMID:33350607

    Open questions at the time
    • Single patient, single lab — not replicated across an infertile cohort
    • No rescue or functional reconstitution of the variant
    • Mechanism linking the channel to the acrosome reaction not resolved
  6. 2025 High

    How testis-restricted expression of Catsper3 is achieved was unknown; promoter dissection identified the core promoter architecture and the CRE-binding factors CREMτ and CREBA as direct transactivators acting at two CRE sites.

    Evidence Luciferase promoter deletion, site-directed mutagenesis, EMSA, and ChIP-qPCR in testis versus liver in mouse

    PMID:40865603

    Open questions at the time
    • Did not establish how CREMτ/CREBA activity is itself restricted to germ cells
    • Human promoter regulation not addressed
    • Other potential regulatory elements outside the analyzed region not excluded

Open questions

Synthesis pass · forward-looking unresolved questions
  • The structural basis of how CatSper3 contributes to pore formation, ion selectivity, and subunit arrangement within the assembled channel remains undefined.
  • No high-resolution structure of the CatSper complex with defined CatSper3 placement
  • Distinct functional contribution of CatSper3 versus other subunits unresolved
  • Molecular link between Ca2+ entry and the acrosome reaction not mechanistically defined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Localization
GO:0005886 plasma membrane 1 GO:0005929 cilium 1
Pathway
R-HSA-1474165 Reproduction 2
Complex memberships
CatSper channel

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2007 Targeted disruption of murine CatSper3 abrogated the sperm-specific alkalinization-activated voltage-sensitive Ca2+-selective current (ICatSper), sperm hyperactivated motility, and male fertility without affecting spermatogenesis or initial motility. Direct protein interactions among all four CatSper subunits were demonstrated, indicating CatSper3 is a required component of the CatSper channel complex in sperm flagella. Gene knockout (targeted disruption), electrophysiology (patch clamp of ICatSper), sperm motility assay, co-immunoprecipitation (direct protein interactions among CatSpers) Proceedings of the National Academy of Sciences of the United States of America High 17227845
2007 CatSper3 knockout male mice are completely infertile; sperm show rapid loss of motility and lack of hyperactivated motility specifically under capacitating conditions, establishing that CATSPER3 is required for capacitation-dependent sperm hyperactivation. Gene knockout (homologous recombination), sperm motility analysis under capacitating vs. non-capacitating conditions, fertility assays Biology of reproduction High 17344468
2003 In silico identification and sequence analysis revealed that CatSper3 encodes a single channel-forming domain with a predicted pore-loop (consensus TxDxW) and a C-terminal coiled-coil domain shared with CatSper1, 2, and 4, consistent with heterotetramer assembly. Expression was confirmed in testis. In silico gene prediction, sequence/domain analysis, RT-PCR expression analysis in testis Reproductive biology and endocrinology : RB&E Low 12932298
2020 A homozygous loss-of-function mutation in CATSPER3 (p.L236*) was identified in an infertile man with failure of sperm acrosome reaction (AR) but normal routine semen parameters, establishing that CATSPER3 is required for the acrosome reaction in human sperm. Whole-exome sequencing, Sanger sequencing validation, anti-CD46 immunofluorescence assay for acrosome reaction Molecular genetics & genomic medicine Medium 33350607
2025 The murine Catsper3 gene has a TATA-less, DPE-independent core promoter located at −157 to +152 relative to the TSS. Transcription factors CREMτ and CREBA directly bind two CRE sites within the +268 to +439 region to transactivate Catsper3 expression; mutation of both CRE sites abolishes this transactivation. In vivo ChIP-qPCR confirmed enrichment of CREBA and CREMτ at the Catsper3 promoter in testis but not liver, demonstrating tissue-specific transcriptional regulation. Promoter deletion analysis (luciferase reporter), site-directed mutagenesis of TATA box, DPE, and CRE sites, EMSA (in vitro binding), ChIP-qPCR (in vivo binding in testis vs. liver) Biochimica et biophysica acta. Gene regulatory mechanisms High 40865603
2023 In the ascidian Ciona intestinalis, CatSper3 KO spermatozoa showed significantly reduced motility and loss of chemotactic behavior, demonstrating that CatSper3 contributes to basic flagellar motility and chemotaxis in non-mammalian species, and that CatSper3 protein localizes to sperm flagella. CRISPR/KO gene disruption, sperm motility analysis, chemotaxis assay, localization by immunostaining Frontiers in cell and developmental biology Medium 38020915

Source papers

Stage 0 corpus · 51 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2007 All four CatSper ion channel proteins are required for male fertility and sperm cell hyperactivated motility. Proceedings of the National Academy of Sciences of the United States of America 412 17227845
2007 Catsper3 and Catsper4 are essential for sperm hyperactivated motility and male fertility in the mouse. Biology of reproduction 145 17344468
2018 Evolutionary history of human colitis-associated colorectal cancer. Gut 138 29991641
2003 Identification of human and mouse CatSper3 and CatSper4 genes: characterisation of a common interaction domain and evidence for expression in testis. Reproductive biology and endocrinology : RB&E 119 12932298
2014 CatSper channel, sperm function and male fertility. Reproductive biomedicine online 96 25457194
2007 Expression of CatSper family transcripts in the mouse testis during post-natal development and human ejaculated spermatozoa: relationship to sperm motility. Molecular human reproduction 69 17347248
2014 ShaoYao decoction ameliorates colitis-associated colorectal cancer by downregulating proinflammatory cytokines and promoting epithelial-mesenchymal transition. Journal of translational medicine 61 24766737
2017 Berberine inhibits colitis-associated tumorigenesis via suppressing inflammatory responses and the consequent EGFR signaling-involved tumor cell growth. Laboratory investigation; a journal of technical methods and pathology 58 28759012
2011 Inflammatory bowel disease and colon cancer. Recent results in cancer research. Fortschritte der Krebsforschung. Progres dans les recherches sur le cancer 58 21822822
2021 Lactobacillus coryniformis MXJ32 administration ameliorates azoxymethane/dextran sulfate sodium-induced colitis-associated colorectal cancer via reshaping intestinal microenvironment and alleviating inflammatory response. European journal of nutrition 48 34185157
2021 Atractylenolide I Inhibits NLRP3 Inflammasome Activation in Colitis-Associated Colorectal Cancer via Suppressing Drp1-Mediated Mitochondrial Fission. Frontiers in pharmacology 45 34335248
2015 Molecular Alterations of Colorectal Cancer with Inflammatory Bowel Disease. Digestive diseases and sciences 38 25840920
2011 A comprehensive gene mutation screen in men with asthenozoospermia. Fertility and sterility 31 21255775
2015 Shenling Baizhu San supresses colitis associated colorectal cancer through inhibition of epithelial-mesenchymal transition and myeloid-derived suppressor infiltration. BMC complementary and alternative medicine 30 25897964
2010 A two-locus system controls susceptibility to colitis-associated colon cancer in mice. Oncotarget 29 21311099
2022 The P2X7 Receptor Promotes Colorectal Inflammation and Tumorigenesis by Modulating Gut Microbiota and the Inflammasome. International journal of molecular sciences 28 35563010
2014 Spontaneous regression of crizotinib-associated complex renal cysts during continuous crizotinib treatment. The oncologist 23 25096999
2021 The probiotic Companilactobacillus crustorum MN047 alleviates colitis-associated tumorigenesis via modulating the intestinal microenvironment. Food & function 22 34668003
2021 Effect of freeze-thawing process on lipid peroxidation, miRNAs, ion channels, apoptosis and global DNA methylation in ram spermatozoa. Reproduction, fertility, and development 18 34585662
2022 Mast cell-T cell axis alters development of colitis-dependent and colitis-independent colorectal tumours: potential for therapeutically targeting via mast cell inhibition. Journal for immunotherapy of cancer 16 36220303
2019 Inactivation of Interferon Regulatory Factor 1 Causes Susceptibility to Colitis-Associated Colorectal Cancer. Scientific reports 16 31827213
2023 Pivotal role of AKR1B1 in pathogenesis of colitis associated colorectal carcinogenesis. International immunopharmacology 15 37044030
2020 Patient with CATSPER3 mutations-related failure of sperm acrosome reaction with successful pregnancy outcome from intracytoplasmic sperm injection (ICSI). Molecular genetics & genomic medicine 14 33350607
2021 Somatic mutation profiles as molecular classifiers of ulcerative colitis-associated colorectal cancer. International journal of cancer 13 33521965
2022 Further Insights on RNA Expression and Sperm Motility. Genes 11 35886074
2013 Neurotensin receptor 1 overexpression in inflammatory bowel diseases and colitis-associated neoplasia. World journal of gastroenterology 11 23901225
2023 CatSper mediates not only chemotactic behavior but also the motility of ascidian sperm. Frontiers in cell and developmental biology 10 38020915
2022 A genome-wide association study on frequent exacerbation of asthma depending on smoking status. Respiratory medicine 10 35606283
2019 Newly recognized non-adenomatous lesions associated with enteric carcinomas in inflammatory bowel disease - Report of six rare and unique cases. Annals of diagnostic pathology 10 31862522
2011 Molecular cloning, spatial and temporal expression analysis of CatSper genes in the Chinese Meishan pigs. Reproductive biology and endocrinology : RB&E 10 21970684
2021 Immunoprofiles and DNA Methylation of Inflammatory Marker Genes in Ulcerative Colitis-Associated Colorectal Tumorigenesis. Biomolecules 7 34680073
2024 Synthetic free fatty acid receptor (FFAR) 2 agonist 4-CMTB and FFAR4 agonist GSK13764 inhibit colon cancer cell growth and migration and regulate FFARs expression in in vitro and in vivo models of colorectal cancer. Pharmacological reports : PR 6 39432182
2020 Hypermethylation of Corticotropin Releasing Hormone Receptor-2 Gene in Ulcerative Colitis Associated Colorectal Cancer. In vivo (Athens, Greece) 6 31882463
2022 Neferine Suppresses Experimental Colitis-Associated Colorectal Cancer by Inhibition of NF-[Formula: see text]B p65 and STAT3. The American journal of Chinese medicine 5 35726141
2023 Reduction of cryopreservation-induced structural, functional and molecular damages in ram sperm by hydrated C60 fullerene. Reproduction in domestic animals = Zuchthygiene 4 38038214
2023 The Detection of CatSper1 and CatSper3 Expression in Men with Normozoospermia and Asthenoteratozoospermia and Its Association with Sperm Parameters, Fertilization Rate, Embryo Quality. Reproductive sciences (Thousand Oaks, Calif.) 3 37957468
2025 CFAP300 loss-of-function variant causes primary ciliary dyskinesia and male infertility via disrupting sperm flagellar assembly and acrosome formation. Asian journal of andrology 2 40898687
2025 Ulcerative colitis and colorectal cancer: Pathogenic insights and precision strategies for prevention and treatment. World journal of gastrointestinal oncology 2 41114102
2025 Platelet-rich plasma strategy against freezing damage in ram spermatozoa: its effect on miRNA, ion channels, growth factors, lipids and oxidative stress. Reproduction, fertility, and development 2 41253134
2024 Identification of Potential Biomarkers Associated with Spermatogenesis in Azoospermia. Clinical laboratory 2 39506588
2023 Inflammatory Bowel Disease-Associated Colorectal Cancer: Translational and Transformational Risks Posed by Exogenous Free Hemoglobin Alpha Chain, A By-Product of Extravasated Erythrocyte Macrophage Erythrophagocytosis. Medicina (Kaunas, Lithuania) 2 37476546
2025 Cellular Heterogeneity and IL-17 Pathway Dynamics Reveal Insights into the Transition from Ulcerative Colitis to Colorectal Cancer Through scRNA-Seq Analysis. Journal of inflammation research 1 40458692
2025 The Catsper3 promoter activity is regulated by the cAMP-Response Element Modulator tau (CREMτ) and the cAMP-Response Element Binding protein 1A (CREBA) transcription factors. Biochimica et biophysica acta. Gene regulatory mechanisms 1 40865603
2023 New gold(III) complexes TGS 121, 404, and 702 show anti-tumor activity in colitis-induced colorectal cancer: an in vitro and in vivo study. Pharmacological reports : PR 1 38082190
2022 In Silico Analysis of CatSper Family Genes and APOB Gene Regulation in Male Infertility. Advances in experimental medicine and biology 1 36472830
2026 Intraepididymal platelet-rich plasma improves semen cryoresistance via antioxidant, lipid and molecular modulation during the non-breeding season in rams. Veterinary research communications 0 41762345
2026 Benzo[a]pyrene lowers the sperm quality in male rats by downregulating the expression of ZMYND15 and ZMYND10. Reproductive toxicology (Elmsford, N.Y.) 0 41850444
2026 The Expression of Kisspeptin Receptor, Catsper 3 and Acrosome Integrity in Oligozoospermic and Normozoospermic Individuals. Genes 0 41898800
2026 The Role of Nuclear APOBEC Enzymes in Neoplastic Progression of Ulcerative Colitis. Clinical and experimental gastroenterology 0 42006844
2025 Synthesis and evaluation of KR-12, an LL-37 fragment, and its short-chain fatty acid derivatives: selective cytotoxicity in colorectal cancer cells and anti-tumor efficacy in an azoxymethane/DSS-induced colitis-associated cancer mouse model. Pharmacological reports : PR 0 41091413
2016 Mapping hyper-susceptibility to colitis-associated colorectal cancer in FVB/NJ mice. Mammalian genome : official journal of the International Mammalian Genome Society 0 26979842

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