Affinage

CABP2

Calcium-binding protein 2 · UniProt Q9NPB3

Length
220 aa
Mass
24.5 kDa
Annotated
2026-06-09
12 papers in source corpus 5 papers cited in narrative 5 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

CABP2 encodes a calmodulin-related Ca2+-binding protein that serves as a presynaptic modulator of CaV1.3 voltage-gated calcium channels required for synaptic signal encoding in cochlear inner hair cells and retinal neurons (PMID:22981119, PMID:34489639). CaBP2 directly binds Ca2+ and, through this Ca2+ sensing, suppresses steady-state inactivation of CaV1.3 channels, thereby sustaining calcium channel availability for indefatigable synaptic transmission (PMID:22981119, PMID:34489639). A truncating splice-site mutation that disrupts Ca2+ binding weakens CaV1.3 regulation, linking CaBP2 loss of function to autosomal-recessive deafness (DFNB93) (PMID:22981119). In Cabp2 knockout mice, loss of CaBP2 produces enhanced CaV1.3 inactivation, elevated auditory brainstem response thresholds, and reduced otoacoustic emissions, while AAV-mediated re-expression of Cabp2 in inner hair cells reverses the enhanced channel inactivation and restores hearing (PMID:34489639, PMID:29661613). CaBP2 additionally shapes retinal ganglion cell light-response amplitude and kinetics through presynaptic Ca2+-dependent signaling without being required for ribbon synapse structural integrity (PMID:27822497).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2012 High

    Established that CaBP2 regulates CaV1.3 channels through its Ca2+-binding capacity by showing a disease-associated truncation impairs both Ca2+ binding and channel modulation.

    Evidence Isothermal titration calorimetry and CaV1.3 channel regulation assays comparing wild-type and truncated CaBP2 from a DFNB93 family

    PMID:22981119

    Open questions at the time
    • Did not define which structural region of CaBP2 contacts CaV1.3
    • Channel regulation assessed in vitro, not in native hair cells
  2. 2016 Medium

    Demonstrated that CaBP2 is required for proper presynaptic Ca2+-dependent transmission of light responses in the retina, distinguishing a functional role from a structural one.

    Evidence Whole-cell patch clamp of retinal ganglion cells plus immunohistochemistry and electron microscopy in Cabp2 KO mice

    PMID:27822497

    Open questions at the time
    • Did not identify the specific channel CaBP2 modulates in retinal neurons
    • Mechanism of altered response kinetics not resolved at the molecular level
  3. 2018 Medium

    Showed CaBP2 is required for normal peripheral auditory function across both inner and outer hair cell-dependent measures, defining the in vivo deafness phenotype.

    Evidence Auditory brainstem responses and distortion product otoacoustic emissions in Cabp2 KO mice

    PMID:29661613

    Open questions at the time
    • DPOAE deficit implicates outer hair cells but the molecular basis there was not established
    • Frequency-specific vulnerability not mechanistically explained
  4. 2021 High

    Established causality and therapeutic reversibility by showing AAV-delivered Cabp2 restores CaV1.3 channel availability and hearing in knockout mice.

    Evidence AAV2/1 and AAV-PHP.eB gene delivery in Cabp2 KO mice with IHC patch clamp and in vivo ABR readouts

    PMID:34489639

    Open questions at the time
    • Durability of rescue and human translatability not addressed
    • Did not resolve stoichiometry of CaBP2:CaV1.3 interaction
  5. 2025 Medium

    Consolidated the mechanistic model that CaBP2 suppresses CaV1.3 steady-state inactivation to maintain presynaptic Ca2+ channel availability for fatigue-resistant sound encoding.

    Evidence Review synthesizing DFNB93 mouse electrophysiology and gene therapy preclinical data

    PMID:40927552

    Open questions at the time
    • No new primary data
    • Structural basis of channel modulation still undefined

Open questions

Synthesis pass · forward-looking unresolved questions
  • The structural mechanism by which CaBP2 binds and modulates CaV1.3, and whether it acts on additional channel targets in retinal neurons, remains unresolved.
  • No structure of a CaBP2–CaV1.3 complex
  • Identity of the retinal channel target not established
  • Interactome beyond CaV1.3 uncharacterized in the available corpus

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 2 GO:0140299 molecular sensor activity 1
Partners

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2012 A splice-site mutation (c.637+1G>T) in CABP2 leads to exon 6 skipping and premature truncation (p.Phe164Serfs*4); the truncated CaBP2 showed altered Ca2+ binding by isothermal titration calorimetry and less potent regulation of CaV1.3 Ca2+ channels compared to wild-type CaBP2, establishing that CaBP2 modulates CaV1.3 channels via Ca2+ sensing. Isothermal titration calorimetry (Ca2+ binding assay) and CaV1.3 channel regulation assay comparing wild-type vs. truncated CaBP2 American journal of human genetics High 22981119
2021 AAV-mediated delivery of Cabp2 coding sequence into inner hair cells (IHCs) of Cabp2 knockout mice restored CaV1.3 calcium channel function (reversed enhanced steady-state inactivation) and improved hearing, confirming that CaBP2 suppresses steady-state inactivation of IHC CaV1.3 channels to enable synaptic sound encoding. AAV2/1 and AAV-PHP.eB gene delivery in Cabp2 KO mice; in vitro patch clamp of IHCs and in vivo auditory brainstem responses (ABRs) Frontiers in molecular neuroscience High 34489639
2018 CaBP2 KO mice exhibit significant ABR threshold elevations and reduced DPOAEs by 9 weeks, demonstrating that CaBP2 is required for normal peripheral auditory function, particularly in the mid-frequency range, and that loss of CaBP2 impairs both inner and outer hair cell-dependent hearing. Auditory brainstem responses (ABRs) and distortion product otoacoustic emissions (DPOAEs) in Cabp2 KO mice Hearing research Medium 29661613
2016 CaBP2 KO mice show altered retinal ganglion cell light response amplitude and kinetics compared to wild-type, while gross retinal and synapse morphology (including ribbon synapses) remain normal, indicating CaBP2 is required for proper transmission of light responses through the retina via presynaptic Ca2+-dependent signaling, but not for synapse structural integrity. Whole-cell patch clamp recordings of retinal ganglion cells in Cabp2 KO mice; immunohistochemistry and transmission electron microscopy for morphology eNeuro Medium 27822497
2025 CaBP2 modulates presynaptic CaV1.3 Ca2+ channel function in IHCs; lack of CaBP2 causes enhanced steady-state inactivation of CaV1.3 channels, impairing synaptic sound encoding (auditory synaptopathy), consistent with its role as a required modulator of IHC presynaptic calcium channel availability. Review/perspective synthesizing DFNB93 mouse model electrophysiology and gene therapy preclinical data MedComm Medium 40927552

Source papers

Stage 0 corpus · 12 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2012 A mutation in CABP2, expressed in cochlear hair cells, causes autosomal-recessive hearing impairment. American journal of human genetics 84 22981119
1994 Effects of CaBP2, the rat analog of ERp72, and of CaBP1 on the refolding of denatured reduced proteins. Comparison with protein disulfide isomerase. The Journal of biological chemistry 77 8300576
1995 Two resident ER-proteins, CaBP1 and CaBP2, with thioredoxin domains, are substrates for thioredoxin reductase: comparison with protein disulfide isomerase. FEBS letters 73 7835433
1993 CaBP2 is a rat homolog of ERp72 with proteindisulfide isomerase activity. European journal of biochemistry 57 8477750
2021 Cabp2-Gene Therapy Restores Inner Hair Cell Calcium Currents and Improves Hearing in a DFNB93 Mouse Model. Frontiers in molecular neuroscience 21 34489639
2018 Functions of CaBP1 and CaBP2 in the peripheral auditory system. Hearing research 21 29661613
2016 Lack of CaBP1/Caldendrin or CaBP2 Leads to Altered Ganglion Cell Responses. eNeuro 13 27822497
2019 A Novel Pathogenic Variant in the CABP2 Gene Causes Severe Nonsyndromic Hearing Loss in a Consanguineous Iranian Family. Audiology & neuro-otology 10 31661684
1997 Phosphorylation of CaBP1 and CaBP2 by protein kinase CK2. Journal of biochemistry 10 9058200
2018 Genetic Linkage Analysis of DFNB4, DFNB28, DFNB93 Loci in Autosomal Recessive Non-syndromic Hearing Loss: Evidence for Digenic Inheritance in GJB2 and GJB3 Mutations. Iranian journal of public health 8 29318123
2021 First reported CABP2-related non-syndromic hearing loss in Northern Europe. Molecular genetics & genomic medicine 6 33666369
2025 Is CABP2-Associated Hearing Loss (DFNB93) a Gene Therapy Target? Preclinical Progress and Patient Registry. MedComm 2 40927552

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