Affinage

C19ORF25

UPF0449 protein C19orf25 · UniProt Q9UFG5

Length
118 aa
Mass
12.9 kDa
Annotated
2026-06-09
4 papers in source corpus 2 papers cited in narrative 1 extracted findings
Cross-family judge faithfulness: 2/2 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

C19orf25 is a functionally uncharacterized gene implicated in restraining STING-dependent innate immune signaling through a role in Golgi-to-ER retrograde transport (PMID:39657680, PMID:38645119). In a genome-wide optical pooled CRISPR screen scoring subcellular STING localization, loss of C19orf25 enhanced STING signaling, and C19orf25 co-clustered phenotypically with USE1, a Golgi-to-ER retrograde transport factor, placing it in a transport pathway that normally limits STING activity (PMID:39657680, PMID:38645119). Beyond this genetic and phenotypic association (PMID:39657680, PMID:38645119), no direct molecular activity, binding partner, or biochemical mechanism for C19orf25 has been characterized in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 1 step
  1. 2024 Medium

    Whether C19orf25 has any defined cellular role was unknown; a genome-wide imaging screen showed its loss enhances STING signaling and that it clusters with the retrograde transport factor USE1, establishing a candidate function in Golgi-to-ER transport that restrains STING.

    Evidence Genome-wide optical pooled CRISPR screen with high-content subcellular imaging of STING localization in 45 million cells, phenotypic clustering, and functional validation of STING signaling upon gene loss

    PMID:38645119 PMID:39657680

    Open questions at the time
    • No direct physical interaction between C19orf25 and USE1 or other transport machinery demonstrated
    • No in vitro reconstitution or biochemical assay defining a molecular activity
    • Mechanism by which the implicated transport pathway restrains STING not resolved

Open questions

Synthesis pass · forward-looking unresolved questions
  • The molecular activity, direct binding partners, and subcellular localization of C19orf25, and the precise mechanism linking it to Golgi-to-ER transport and STING regulation, remain undefined.
  • No structural or biochemical characterization
  • No confirmed localization data
  • No reciprocal validation of the USE1 association

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
No controlled-vocabulary terms were assigned to this entry.

Evidence

Reading pass · 1 per-paper finding extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2024 Loss of C19orf25 enhances STING signaling; C19orf25 clustered with USE1 (a Golgi-to-ER transport protein) in a genome-wide optical pooled screen based on subcellular STING localization phenotypes, placing C19orf25 in a pathway involved in Golgi-to-ER retrograde transport that normally restrains STING signaling. Genome-wide optical pooled CRISPR screen with high-content subcellular imaging of STING localization in 45 million cells; phenotypic clustering; functional validation by measuring STING signaling upon gene loss Cell systems Medium 38645119 39657680

Source papers

Stage 0 corpus · 4 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2024 Classification and functional characterization of regulators of intracellular STING trafficking identified by genome-wide optical pooled screening. Cell systems 4 39657680
2025 The significance of urine extracellular vesicle DNA methylation detection in the diagnosis and classification of prostate cancer. Journal of advanced research 3 41043659
2025 Characterization of methylation profile in biofluid cell-free DNA and identification of differentially methylated genes for phenotypic representations in Parkinson's disease. Clinical neurology and neurosurgery 1 40527220
2024 Classification and functional characterization of regulators of intracellular STING trafficking identified by genome-wide optical pooled screening. bioRxiv : the preprint server for biology 0 38645119

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