Affinage

BGN

Biglycan · UniProt P21810

Length
368 aa
Mass
41.7 kDa
Annotated
2026-06-09
30 papers in source corpus 18 papers cited in narrative 18 extracted findings
Cross-family judge faithfulness: 6/6 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

BGN (biglycan) is an X-linked extracellular matrix small leucine-rich proteoglycan that functions both as a structural matrix component and as a signaling ligand engaging innate-immune and developmental pathways (PMID:1968422, PMID:36632455). As a secreted ligand, BGN binds TLR2/TLR4 to activate NF-κB signaling: in colon cancer it drives NF-κB-dependent H3K27me3 silencing of SLC26A2 and ST6GalNAc6 to suppress immunosuppressive Siglec-7 ligand synthesis (PMID:32050430), in gastric cancer it transforms mesothelial cells into cancer-associated fibroblast-like cells through a STAT3-reinforced positive feedback loop (PMID:36632455), and CAF-derived BGN signals through TLR4 to activate Erk and NF-κB and promote tumor cell proliferation, migration, and M2 macrophage polarization (PMID:41465449). BGN also activates canonical Wnt/β-catenin signaling, a role required for CLIC5-dependent myogenic differentiation and satellite cell function in skeletal muscle (PMID:39999205) and exploited in gastric cancer EMT downstream of GLIS2-driven transcription (PMID:40936440). Through its leucine-rich repeat domain BGN engages TGF-β and promotes BMP/Smad-dependent osteogenesis, with bone-forming activity controlled by miR-185 and miR-330-5p (PMID:27236923, PMID:30787286, PMID:32374006), and it directly binds the NOTCH3 ectodomain, accumulating in CADASIL arteries (PMID:25578324). BGN abundance is set by FBXW7-mediated ubiquitination of the protein and by PDK1-enhanced mRNA stability that couples to NF-κB activation (PMID:35273678, PMID:39578715). Loss-of-function and missense BGN mutations cause X-linked spondyloepimetaphyseal dysplasia, with structural modeling implicating disrupted TGF-β binding (PMID:27236923).

Mechanistic history

Synthesis pass · year-by-year structured walk · 14 steps
  1. 1990 High

    Establishing the chromosomal location and structure of BGN was the first step toward connecting the gene to X-linked phenotypes.

    Evidence Southern analysis of human-rodent somatic cell hybrid DNAs

    PMID:1968422

    Open questions at the time
    • Does not address protein function or tissue expression
    • No regulatory element mapping
  2. 1992 Medium

    Fine-mapping refined BGN's position within Xq28 and nominated it as a candidate for an X-linked chondrodysplasia, framing it as a skeletal-disease gene.

    Evidence Breakpoint-defined somatic hybrid cell line panel

    PMID:1612609

    Open questions at the time
    • Candidacy not confirmed by causative mutation at this stage
    • No functional link established
  3. 1995 Medium

    Determining that BGN is subject to X inactivation yet shows pseudo-autosomal expression resolved how its dosage is regulated across sex chromosome complements.

    Evidence Hybrid cell line X-inactivation analysis with patient mRNA/protein profiling

    PMID:7607653

    Open questions at the time
    • The proposed trans-acting regulator was not identified
    • Mechanism of pseudo-autosomal behavior unresolved
  4. 2015 Medium

    Demonstrating a direct BGN-NOTCH3 ectodomain interaction placed BGN within cerebrovascular smooth muscle signaling and CADASIL pathology.

    Evidence Direct protein interaction assay, co-incubation with purified NOTCH3 ectodomain, rapamycin treatment

    PMID:25578324

    Open questions at the time
    • Binding interface not mapped
    • Functional consequence of the interaction for NOTCH3 signaling not defined
    • Single lab
  5. 2016 Medium

    Identifying causative BGN missense mutations established BGN as the gene for X-linked spondyloepimetaphyseal dysplasia and proposed disrupted TGF-β binding as the mechanism.

    Evidence Exome sequencing across three families plus 3D structural simulation of BGN-TGF-β interaction

    PMID:27236923

    Open questions at the time
    • No in vitro binding assay confirming reduced TGF-β binding
    • Downstream signaling consequences in patient tissue not measured
  6. 2020 Medium

    Mapping the BGN-TLR4-NF-κB axis to epigenetic silencing of glycosyltransferase genes connected BGN to tumor immune evasion via Siglec-7 ligand suppression.

    Evidence shRNA knockdown, ChIP for H3K27me3, NF-κB reporter, glycan binding/flow cytometry in colon cancer cells

    PMID:32050430

    Open questions at the time
    • Direct BGN-TLR4 binding not biochemically resolved here
    • In vivo relevance not tested
  7. 2020 Medium

    Placing BGN downstream of osteogenic miRNAs (miR-185, miR-330-5p) defined how BGN expression is tuned to control BMP/Smad-dependent bone formation.

    Evidence Dual-luciferase reporter assays, miR knockout/inhibitor experiments, OVX mouse models with micro-CT

    PMID:30787286 PMID:32374006

    Open questions at the time
    • Mechanism by which BGN modulates BMP/Smad activity not biochemically dissected
    • Single lab per study
  8. 2022 Medium

    Identifying FBXW7-mediated ubiquitination of BGN revealed post-translational control of BGN protein stability through the ubiquitin-proteasome system.

    Evidence Co-IP, ChIRP, RIP, RNA pull-down, luciferase reporter linking lncRNA SEMA3B-AS1/HMGB1 to FBXW7

    PMID:35273678

    Open questions at the time
    • Ubiquitination sites on BGN not mapped
    • Single lab
  9. 2023 Medium

    Showing BGN binds TLR2/TLR4 to reprogram mesothelial cells into CAF-like cells, reinforced by a STAT3 feedback loop, established a self-amplifying BGN circuit in the gastric tumor stroma.

    Evidence Co-IP, nuclear/cytoplasmic fractionation, rescue experiments

    PMID:36632455

    Open questions at the time
    • Direct TLR receptor specificity not separated
    • In vivo loop dynamics not quantified
  10. 2024 Medium

    Linking CLIC5 to BGN-driven Wnt/β-catenin activation defined a physiological role for BGN in myogenic differentiation and muscle regeneration.

    Evidence Muscle-specific CLIC5 knockout mice, myoblast differentiation assays, protein interaction studies, Wnt reporter

    PMID:39999205

    Open questions at the time
    • How BGN engages the Wnt receptor complex not resolved
    • Direct CLIC5-BGN binding interface not mapped
  11. 2024 Medium

    Demonstrating PDK1 stabilizes BGN mRNA and physically interacts with BGN to activate NF-κB added a cytoplasmic, mRNA-stability mode of BGN regulation in ovarian cancer.

    Evidence Co-IP, co-localization imaging, RNA stability assay, RNA-seq, rescue experiments

    PMID:39578715

    Open questions at the time
    • Mechanism of mRNA stabilization not defined
    • Cytoplasmic BGN function distinct from secreted ligand unclear
  12. 2025 Medium

    Multiple transcriptional regulators (GLIS2, REST via HCN2) and recombinant-BGN/TLR4 experiments extended the BGN-Wnt and BGN-NF-κB/Erk axes across esophageal, gastric, and bladder cancers and to ferroptosis suppression.

    Evidence Recombinant BGN + TLR4 blockade, ChIP, dual-luciferase reporters, knockdown/rescue and in vivo assays

    PMID:40936440 PMID:41465449 PMID:42074076

    Open questions at the time
    • GLIS2 promoter binding shown by reporter without ChIP
    • BGN's direct biochemical role in ferroptosis not defined
  13. 2025 Low

    Functional assays of a Meester-Loeys syndrome BGN variant tied the mutation to reduced canonical Wnt and TGF-β reporter activity, though patient fibroblasts showed no consistent signaling change.

    Evidence Luciferase reporter assays in mutant-BGN-expressing cell lines, nuclear fractionation of patient fibroblasts

    PMID:41465473

    Open questions at the time
    • Reporter result conflicts with patient fibroblast data
    • Overexpression system may not reflect endogenous context
    • Single lab
  14. 2026 Low

    Spatial and single-cell analyses positioned CAF-derived BGN within a BGN/MDK axis shaping the melanoma microenvironment and proposed m6A control of BGN.

    Evidence Spatial transcriptomics, scRNA-seq, CellChat, m6A regulator assays, in vitro/in vivo functional assays

    PMID:41833003

    Open questions at the time
    • m6A and MDK axis rely on computational inference with limited direct biochemical validation
    • Single lab

Open questions

Synthesis pass · forward-looking unresolved questions
  • How BGN selectively engages distinct receptors (TLR2/TLR4, NOTCH3, Wnt complex) to choose between osteogenic, myogenic, immune, and tumor-promoting outcomes remains unresolved.
  • No structural model of BGN-receptor complexes
  • Unclear how matrix-bound versus soluble BGN dictate pathway choice
  • Reconciliation of conflicting patient-fibroblast signaling data with reporter assays lacking

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0048018 receptor ligand activity 3 GO:0098772 molecular function regulator activity 3
Localization
GO:0005576 extracellular region 2 GO:0005829 cytosol 1 GO:0031012 extracellular matrix 1
Pathway
R-HSA-162582 Signal Transduction 3 R-HSA-168256 Immune System 3 R-HSA-1474244 Extracellular matrix organization 1 R-HSA-1643685 Disease 1

Evidence

Reading pass · 18 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1990 BGN (biglycan) gene was localized to human chromosome Xq13-qter by Southern analysis of human-rodent somatic cell hybrid DNAs; the gene is approximately 6 kb in length and present as a single copy. Southern blot analysis of somatic cell hybrid DNAs Genomics High 1968422
1992 BGN was fine-mapped within Xq28, proximal to red/green cone pigment genes and G6PD, and distal to DXS304/DXS305/GABRA3, identifying it as a candidate gene for X-linked dominant chondrodysplasia punctata. Somatic hybrid cell line panel with defined X chromosome breakpoints Genomics Medium 1612609
1995 BGN is subject to X inactivation (demonstrated via hybrid cell lines) but displays pseudo-autosomal expression behavior, likely regulated by a trans-acting gene that escapes X inactivation rather than by escape of BGN itself or a Y-chromosomal homolog. Hybrid cell line analysis, mRNA and protein expression profiling in patients with varying sex chromosome numbers Human genetics Medium 7607653
2015 BGN protein directly interacts with NOTCH3 ectodomain protein in cell culture and in direct protein interaction assays; BGN accumulates in CADASIL arteries and cerebrovascular smooth muscle cells upregulate BGN in response to NOTCH3 ectodomain via an mTOR-sensitive mechanism. Direct protein interaction assay, cell culture co-incubation with purified NOTCH3 ectodomain, rapamycin (mTOR inhibitor) treatment, immunoblotting, in situ hybridization Translational stroke research Medium 25578324
2016 Missense mutations in BGN (p.Lys147Glu and p.Gly259Val) cause X-linked recessive spondyloepimetaphyseal dysplasia; 3D structural simulation placed both mutated residues in the concave arc of leucine-rich repeat domains that interact with TGF-β, implicating disrupted TGF-β binding as the pathogenic mechanism. Exome sequencing, 3D structural simulation of BGN–TGF-β interaction American journal of human genetics Medium 27236923
2019 BGN is a direct transcriptional target of miR-185; depletion of miR-185 increases BGN expression and promotes osteogenesis through the BMP/Smad pathway, as identified by dual-luciferase reporter assay and validated in miR-185 knockout mouse osteoblasts and an OVX osteoporosis model. Dual-luciferase reporter assay, miR-185 knockout mouse model, micro-CT bone analysis Cell death & disease Medium 30787286
2020 BGN acts via TLR4 to activate NF-κB, which epigenetically silences (via H3K27me3) the promoters of SLC26A2 and ST6GalNAc6, suppressing synthesis of immunosuppressive Siglec-7 ligands in colon cancer cells; BGN and TLR4 form a positive feedback loop. shRNA knockdown of BGN and TLR4, ChIP for H3K27me3, NF-κB reporter assay, glycan binding/flow cytometry Cells Medium 32050430
2020 BGN silencing by miR-330-5p (validated by dual-luciferase reporter and Western blot) suppresses BMP/Smad pathway activity, ALP activity, and mineralization in bone marrow stromal cells; BGN overexpression reverses these effects, placing BGN downstream of miR-330-5p in osteogenic signaling. Dual-luciferase reporter assay, Western blot, miR-330-5p inhibitor transfection, OVX mouse model with micro-CT European review for medical and pharmacological sciences Medium 32374006
2020 In glioblastoma, PHF20 interacts with WDR5 and activates WISP1 transcription; WISP1 and BGN then act together to regulate β-catenin degradation, sustaining GBM stem cell-like phenotype. Co-immunoprecipitation, promoter binding assays, PHF20 knockout cell lines Frontiers in oncology Low 33117706
2022 FBXW7 E3 ubiquitin ligase mediates ubiquitination of BGN protein; lncRNA SEMA3B-AS1 binds HMGB1 to transcriptionally regulate FBXW7, thereby controlling BGN protein stability via the ubiquitin-proteasome system. Co-immunoprecipitation, ChIRP, RNA immunoprecipitation, RNA pull-down, luciferase reporter assay Oxidative medicine and cellular longevity Medium 35273678
2023 BGN binds TLR2/TLR4 on mesothelial cells to activate NF-κB signaling, driving their transformation into cancer-associated fibroblast-like cells; activated STAT3 in gastric cancer cells then promotes BGN transcription, creating a BGN/FAP-STAT3 positive feedback loop. Co-immunoprecipitation, nuclear/cytoplasmic protein extraction, recovery (rescue) experiments International journal of biological sciences Medium 36632455
2024 CLIC5 promotes myogenic differentiation and skeletal muscle regeneration via direct interaction with BGN, which activates the canonical Wnt/β-catenin signaling pathway; CLIC5 deletion impairs BGN-mediated Wnt/β-catenin activity and reduces satellite cell differentiation potential. CLIC5 muscle-specific knockout mice, in vitro myoblast differentiation assays, protein interaction studies, Wnt/β-catenin pathway reporter Science advances Medium 39999205
2024 PDK1 co-localizes and physically interacts with BGN in the cytoplasm of ovarian cancer cells; PDK1 positively regulates BGN expression by enhancing BGN mRNA stability, and this PDK1–BGN interaction activates the NF-κB oncogenic pathway. Co-immunoprecipitation, co-localization imaging, RNA stability assay, RNA sequencing, BGN overexpression rescue experiments Acta biochimica et biophysica Sinica Medium 39578715
2025 CAF-derived BGN signals through TLR4 on esophageal squamous cell carcinoma cells to activate Erk and NF-κB signaling pathways, promoting cancer cell proliferation and migration; TLR4 blockade abolishes these effects. BGN also promotes M2-like macrophage polarization. Recombinant human BGN treatment, TLR4 blocking antibody, co-culture model, cDNA microarray, Western blot International journal of molecular sciences Medium 41465449
2025 GLIS2 transcription factor directly binds the BGN promoter to enhance BGN transcription, thereby activating Wnt/β-catenin signaling and promoting EMT in gastric cancer; Wnt/β-catenin inhibitor XAV-939 blocks BGN-driven tumor-promoting effects. GLIS2 knockdown/BGN overexpression rescue experiments, Wnt pathway inhibitor XAV-939, analysis of 18 paired GC tissue samples The Kaohsiung journal of medical sciences Low 40936440
2025 Mutant BGN (Meester-Loeys syndrome missense variant) reduces canonical Wnt and TGF-β signaling activity as measured by reporter vector assays in cell lines expressing mutant biglycan; however, dermal fibroblasts from patients did not show consistent differences in β-catenin or p-SMAD2/3 nuclear abundance compared to controls. Luciferase reporter assay in cell lines expressing mutant BGN, nuclear fractionation of patient fibroblasts International journal of molecular sciences Low 41465473
2026 HCN2 promotes nuclear translocation of the REST transcription factor, which binds the BGN promoter to transcriptionally activate BGN expression; BGN upregulation suppresses ferroptosis in bladder cancer cells, enhancing their proliferation and tumorigenesis. Co-immunoprecipitation, chromatin immunoprecipitation, dual-luciferase reporter assay, HCN2 knockdown in vitro and in vivo International journal of molecular sciences Medium 42074076
2026 In melanoma, BGN expression is regulated post-transcriptionally by m6A modification via YTHDF3, YTHDC1, and METTL14 acting in a parallel non-hierarchical manner; within the tumor microenvironment, CAF-derived BGN drives a BGN/MDK (midkine) axis that promotes CAF activation, melanoma proliferation/metastasis, and reduces CD8+ T cell infiltration. Spatial transcriptomics, scRNA-seq, cell trajectory analysis, CellChat signaling analysis, AEBP1 regulatory assay, in vitro/in vivo functional assays Advanced science Low 41833003

Source papers

Stage 0 corpus · 30 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2019 Mmu-miR-185 depletion promotes osteogenic differentiation and suppresses bone loss in osteoporosis through the Bgn-mediated BMP/Smad pathway. Cell death & disease 65 30787286
1990 Localization of PGI (biglycan, BGN) and PGII (decorin, DCN, PG-40) genes on human chromosomes Xq13-qter and 12q, respectively. Genomics 60 1968422
2023 BGN/FAP/STAT3 positive feedback loop mediated mutual interaction between tumor cells and mesothelial cells contributes to peritoneal metastasis of gastric cancer. International journal of biological sciences 50 36632455
1995 The X-chromosomal human biglycan gene BGN is subject to X inactivation but is transcribed like an X-Y homologous gene. Human genetics 45 7607653
1992 Fine mapping of the human biglycan (BGN) gene within the Xq28 region employing a hybrid cell panel. Genomics 45 1612609
2020 BGN/TLR4/NF-B Mediates Epigenetic Silencing of Immunosuppressive Siglec Ligands in Colon Cancer Cells. Cells 37 32050430
2015 BgN-Score and BsN-Score: bagging and boosting based ensemble neural networks scoring functions for accurate binding affinity prediction of protein-ligand complexes. BMC bioinformatics 37 25734685
2016 BGN Mutations in X-Linked Spondyloepimetaphyseal Dysplasia. American journal of human genetics 33 27236923
2018 The Influence of TGF-β3, EGF, and BGN on SOX9 and RUNX2 Expression in Human Chondrogenic Progenitor Cells. The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society 25 30431382
2015 The small leucine-rich proteoglycan BGN accumulates in CADASIL and binds to NOTCH3. Translational stroke research 25 25578324
2022 The lncRNA SEMA3B-AS1/HMGB1/FBXW7 Axis Mediates the Peritoneal Metastasis of Gastric Cancer by Regulating BGN Protein Ubiquitination. Oxidative medicine and cellular longevity 22 35273678
2024 CLIC5 promotes myoblast differentiation and skeletal muscle regeneration via the BGN-mediated canonical Wnt/β-catenin signaling pathway. Science advances 19 39999205
2021 LINC00460 Promotes Cell Proliferation, Migration, Invasion, and Epithelial-Mesenchymal Transition of Head and Neck Squamous Cell Carcinoma via miR-320a/BGN Axis. OncoTargets and therapy 17 33833526
2021 lncRNA LINC00460 Functions as a Competing Endogenous RNA and Regulates Expression of BGN by Sponging miR-149-5p in Colorectal Cancer. Technology in cancer research & treatment 16 33472555
2020 Silencing of miR-330-5p stimulates osteogenesis in bone marrow mesenchymal stem cells and inhibits bone loss in osteoporosis by activating Bgn-mediated BMP/Smad pathway. European review for medical and pharmacological sciences 16 32374006
2014 The BGN and ACAN genes and carpal tunnel syndrome. Gene 15 25173489
2020 PHF20 Promotes Glioblastoma Cell Malignancies Through a WISP1/BGN-Dependent Pathway. Frontiers in oncology 14 33117706
2023 Long noncoding RNA ZEB1-AS1 attenuates ferroptosis of gastric cancer cells through modulating miR-429/BGN axis. Journal of biochemical and molecular toxicology 12 37128782
2020 Consumer acceptability of acha and malted Bambara groundnut (BGN) biscuits sweetened with date palm. Heliyon 6 33294673
2024 PDK1 promotes epithelial ovarian cancer progression by upregulating BGN. Acta biochimica et biophysica Sinica 5 39578715
2026 Enhancer-mediated NR2F2 recruitment activates BGN to promote tumor growth and shape tumor microenvironment in papillary thyroid cancer. Theranostics 2 41328346
2025 BGN Secreted by Cancer-Associated Fibroblasts Promotes Esophageal Squamous Cell Carcinoma Progression via Activation of TLR4-Mediated Erk and NF-κB Signaling Pathways. International journal of molecular sciences 2 41465449
2023 Corrigendum: PHF20 promotes glioblastoma cell malignancies through a WISP1/BGN-dependent pathway. Frontiers in oncology 2 37035210
2025 Experience in Ceftazidime-Avibactam for treatment of MDR BGN infection in Oncologic Children. The Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases 1 39985933
2025 Study on the mechanism of BGN in progression and metastasis of ccRCC. BMC medical genomics 1 40108593
2025 GLIS2 Promotes Epithelial-Mesenchymal Transition and Gastric Cancer Progression by Regulating BGN to Activate the Wnt/β-Catenin Pathway. The Kaohsiung journal of medical sciences 1 40936440
2026 BGN/MDK Axis in the Melanoma Tumor Microenvironment Strengthens Tumor Malignancy by Modulating Cancer Cells and Cancer-Associated Fibroblasts Crosstalk. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 0 41833003
2026 HCN2 Promotes BGN Transcription via REST to Regulate Ferroptosis and Tumor Progression in Bladder Cancer. International journal of molecular sciences 0 42074076
2025 A Family with Meester-Loeys Syndrome Caused by a Novel Missense Variant in the BGN Gene. International journal of molecular sciences 0 41465473
2022 Generation of an induced pluripotent stem cell (iPSC) line (BBANTWi009-A) from a Meester-Loeys syndrome patient carrying a BGN mutation. Stem cell research 0 36599284

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