Affinage

BAD

Bcl2-associated agonist of cell death · UniProt Q92934

Length
168 aa
Mass
18.4 kDa
Annotated
2026-06-09
100 papers in source corpus 7 papers cited in narrative 7 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/6 claims corpus-supported (83%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

BAD is a BH3-only pro-apoptotic BCL-2 family member that couples survival-kinase signaling to the mitochondrial apoptotic machinery, with its activity gated by multisite serine phosphorylation (PMID:9381178, PMID:19641507, PMID:12431365). In its unphosphorylated state, BAD localizes to mitochondria and heterodimerizes with the anti-apoptotic proteins BCL-2 and BCL-XL to promote cell death, whereas phosphorylation sequesters it away from mitochondria via 14-3-3 binding and neutralizes its death-promoting function (PMID:19641507). Survival signaling enforces this inhibition through several kinases: Akt phosphorylates BAD downstream of IL-3/PI 3-kinase to block its pro-apoptotic activity (PMID:9381178), while PKA and RSK1 phosphorylate Ser-155 within the BH3 domain to directly disrupt BAD–BCL-XL binding, a mechanism distinct from the Ser-112/Ser-136 phosphorylation that drives 14-3-3 sequestration (PMID:10837486). Conversely, the TSC2 tumor suppressor activates BAD by reducing Ser-136 phosphorylation through downregulation of p70S6K, increasing BAD/BCL-2 and BAD/BCL-XL heterodimerization to promote apoptosis (PMID:16702951). The balance of BAD phosphorylation (human S75, S99, S118) sets the pro-apoptotic versus pro-survival output, and dephosphorylation by PP2C-class phosphatases opposes the survival state; elevated phospho-BAD confers a growth advantage in cancer cells (PMID:25653146). Beyond apoptosis, BAD participates in non-apoptotic functions including the regulation of mitochondrial glucose metabolism (PMID:19641507).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 1997 High

    Established that survival signaling directly inactivates the death machinery by identifying Akt as the kinase that phosphorylates BAD downstream of IL-3/PI 3-kinase, linking growth-factor signaling to apoptosis suppression.

    Evidence In vitro kinase reconstitution plus in vivo phosphorylation analysis with PI 3-kinase inhibitors in IL-3-stimulated cells

    PMID:9381178

    Open questions at the time
    • Did not resolve how phosphorylation translates to subcellular relocalization away from mitochondria
    • Other survival kinases acting on BAD not yet mapped
  2. 2000 High

    Resolved that BAD inhibition occurs through two mechanistically distinct phosphorylation modes, showing that Ser-155 phosphorylation within the BH3 domain directly blocks BCL-XL binding, separate from the Ser-112/Ser-136 sites that drive 14-3-3 sequestration.

    Evidence In vitro kinase assay, co-immunoprecipitation, site-directed mutagenesis, and cell death rescue assays with PKA and RSK1

    PMID:10837486

    Open questions at the time
    • Relative contribution of each site to physiological survival signaling not quantified
    • Structural basis of BH3-domain phosphorylation blocking heterodimerization not determined
  3. 2002 Medium

    Placed BAD genetically as the connector between survival kinase signaling and the apoptotic machinery in vivo, validating its pathway position across model organisms.

    Evidence Genetic epistasis and in vivo studies in Drosophila and mammals

    PMID:12431365

    Open questions at the time
    • Commentary-level synthesis rather than a single primary mechanistic dataset
    • Did not define tissue-specific kinase inputs
  4. 2006 Medium

    Identified an upstream activator of BAD by showing the TSC2 tumor suppressor reduces Ser-136 phosphorylation via p70S6K downregulation and increases BAD/BCL-2 and BAD/BCL-XL heterodimerization to drive apoptosis.

    Evidence BAD-/- cell experiments, reciprocal co-immunoprecipitation, phosphorylation analysis, and TSC2 overexpression/knockdown

    PMID:16702951

    Open questions at the time
    • Phosphatase mediating the Ser-136 dephosphorylation not identified
    • Single-lab study with limited cell-type breadth
  5. 2015 Medium

    Linked the BAD phosphorylation state to cancer cell survival by showing phospho-BAD is elevated in cancer cells and that PP2C depletion further raises phospho-BAD and confers a growth advantage.

    Evidence siRNA depletion of PP2C, MTS proliferation assays, immunofluorescence for phospho-BAD, RT-qPCR

    PMID:25653146

    Open questions at the time
    • Direct phosphatase–substrate relationship between PP2C and BAD not biochemically reconstituted
    • Specific PP2C isoform and target residues not pinpointed
  6. 2017 Low

    Consolidated the model that three serine phosphosites (S75, S99, S118) toggle BAD between pro-apoptotic and pro-survival functions, including non-apoptotic roles in glycolysis, autophagy, and cell cycle.

    Evidence Review synthesizing prior in vitro and in vivo phosphorylation studies

    PMID:29175460

    Open questions at the time
    • Review without new primary experiments
    • Molecular mechanisms underlying the non-apoptotic glycolytic and autophagy roles not detailed

Open questions

Synthesis pass · forward-looking unresolved questions
  • How BAD mechanistically coordinates mitochondrial glucose metabolism with the apoptotic decision, and which phosphatases physiologically reactivate BAD, remain unresolved.
  • No reconstituted mechanism connecting BAD phosphorylation to metabolic enzyme activity
  • Physiological phosphatase(s) reactivating BAD in vivo not definitively established

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 3
Localization
GO:0005739 mitochondrion 2 GO:0005829 cytosol 1
Pathway
R-HSA-162582 Signal Transduction 3 R-HSA-5357801 Programmed Cell Death 3

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
1997 BAD is phosphorylated by the serine-threonine kinase Akt (PKB) downstream of IL-3/PI 3-kinase signaling, and this phosphorylation prevents BAD's pro-apoptotic function. Active Akt phosphorylated BAD in vivo and in vitro at the same residues phosphorylated in response to IL-3. In vitro kinase assay, in vivo phosphorylation analysis with PI 3-kinase inhibitors, IL-3-stimulated cell assays Science High 9381178
2000 Phosphorylation of BAD at Ser-155 within its BH3 domain (by PKA, RSK1, and survival factor signaling) blocks BAD binding to Bcl-XL, providing a second phosphorylation-dependent mechanism to inhibit BAD's death-promoting activity, distinct from Ser-112/Ser-136 phosphorylation that promotes 14-3-3 binding. RSK1 phosphorylates BAD at both Ser-112 and Ser-155 and rescues BAD-mediated cell death in a manner dependent on phosphorylation at both sites. In vitro kinase assay, co-immunoprecipitation, site-directed mutagenesis, cell death rescue assays The Journal of Biological Chemistry High 10837486
2006 Tuberin (TSC2) activates the pro-apoptotic function of BAD by reducing phosphorylation of BAD at Ser136 (via downregulation of p70S6K activity) and upregulating BAD/BCL-2 and BAD/BCL-XL heterodimerization, thereby promoting apoptosis. BAD-knockout cells confirmed BAD is required as a mediator of tuberin's apoptotic effects. BAD-/- cell experiments, co-immunoprecipitation (BAD/BCL-2 and BAD/BCL-XL interaction), phosphorylation analysis, overexpression/knockdown of TSC2 Oncogene Medium 16702951
2008 BAD functions as a BH3-only pro-apoptotic protein that is regulated by post-translational phosphorylation at multiple serine residues by survival kinases; phosphorylation sequesters BAD to 14-3-3 proteins away from mitochondria, while unphosphorylated BAD heterodimerizes with BCL-2/BCL-XL at the mitochondrial membrane to promote apoptosis. BAD also participates in non-apoptotic roles in glucose metabolism, coordinating mitochondrial fuel metabolism with the apoptotic machinery. Review synthesizing biochemical studies and genetic models (BAD knockout mice) Oncogene Medium 19641507
2002 BAD provides a genetic link between the cell death machinery and survival signaling pathways in vivo, as demonstrated in Drosophila and mammalian genetic studies showing BAD's role in connecting survival kinase signaling to the apoptotic machinery. Genetic epistasis and in vivo studies in model organisms Developmental Cell Medium 12431365
2015 BAD phosphorylation at serine residues (human S75, S99, and S118) determines whether BAD acts pro-apoptotically or pro-survival, and pBAD protein levels are higher in cancer cells compared to immortalized normal cells; depletion of the phosphatase PP2C increases pBAD levels and confers a growth advantage, implicating the BAD phosphorylation state in cancer cell survival. siRNA depletion of PP2C, MTS proliferation assays, immunofluorescence for pBAD, RT-qPCR for PP2C International Journal of Molecular Medicine Medium 25653146
2017 BAD phosphorylation at three specific serine residues (human S75, S99, S118) regulates its dual role as pro-apoptotic or pro-survival protein; phosphorylated BAD also has non-apoptotic functions including regulation of glycolysis, autophagy, and cell cycle progression. Review synthesizing in vitro and in vivo experimental findings on BAD phosphorylation Cancer Letters Low 29175460

Source papers

Stage 0 corpus · 100 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2007 Cellular senescence: when bad things happen to good cells. Nature reviews. Molecular cell biology 3490 17667954
1997 Interleukin-3-induced phosphorylation of BAD through the protein kinase Akt. Science (New York, N.Y.) 1808 9381178
2013 PPARγ signaling and metabolism: the good, the bad and the future. Nature medicine 1625 23652116
1999 Stress and cognition: are corticosteroids good or bad guys? Trends in neurosciences 922 10481183
2022 Cellular senescence: the good, the bad and the unknown. Nature reviews. Nephrology 890 35922662
2010 Preservatives in eyedrops: the good, the bad and the ugly. Progress in retinal and eye research 793 20302969
2015 Microglia in the TBI brain: The good, the bad, and the dysregulated. Experimental neurology 602 26342753
2012 Diabetes and hypertension: the bad companions. Lancet (London, England) 497 22883509
2013 HMGB1 in cancer: good, bad, or both? Clinical cancer research : an official journal of the American Association for Cancer Research 417 23723299
2008 DNA-damage repair; the good, the bad, and the ugly. The EMBO journal 377 18285820
2021 Macrophages: The Good, the Bad, and the Gluttony. Frontiers in immunology 343 34456917
2015 Breaking bad: R-loops and genome integrity. Trends in cell biology 290 26045257
2009 Microglia in ALS: the good, the bad, and the resting. Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology 274 19731042
2000 BAD Ser-155 phosphorylation regulates BAD/Bcl-XL interaction and cell survival. The Journal of biological chemistry 272 10837486
2010 EpCAM in carcinogenesis: the good, the bad or the ugly. Carcinogenesis 257 20837599
2015 The good and the bad faces of STAT1 in solid tumours. Cytokine 227 26631912
2010 Prostaglandins in bone: bad cop, good cop? Trends in endocrinology and metabolism: TEM 220 20079660
2008 BAD: undertaker by night, candyman by day. Oncogene 214 19641507
2010 RNA granules: the good, the bad and the ugly. Cellular signalling 211 20813183
2002 p53: good cop/bad cop. Cell 204 12150992
2015 Amyloid-β Receptors: The Good, the Bad, and the Prion Protein. The Journal of biological chemistry 203 26719327
2015 Protoporphyrin IX: the Good, the Bad, and the Ugly. The Journal of pharmacology and experimental therapeutics 186 26588930
2017 Microhomology-mediated end joining: Good, bad and ugly. Mutation research 176 28754468
2003 Does Rap1 deserve a bad Rap? Trends in biochemical sciences 171 12765839
2017 Inducible nitric oxide synthase: Good or bad? Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie 166 28651238
2015 Understanding genistein in cancer: The "good" and the "bad" effects: A review. Food chemistry 166 26593532
2020 Insulin: too much of a good thing is bad. BMC medicine 164 32819363
2004 Herbal bioactivation: the good, the bad and the ugly. Life sciences 162 14672753
2014 Breaking bad in the germinal center: how deregulation of BCL6 contributes to lymphomagenesis. Trends in molecular medicine 156 24698494
2019 The Good and the Bad of Mitochondrial Breakups. Trends in cell biology 150 31495461
2001 Dysregulation of cellular calcium homeostasis in Alzheimer's disease: bad genes and bad habits. Journal of molecular neuroscience : MN 145 11816794
2014 Good guy or bad guy: the opposing roles of microRNA 125b in cancer. Cell communication and signaling : CCS 142 24774301
2016 Antibiotic prophylaxis in cirrhosis: Good and bad. Hepatology (Baltimore, Md.) 141 26528864
2015 HSP90AB1: Helping the good and the bad. Gene 140 26358502
2015 Ketamine and phencyclidine: the good, the bad and the unexpected. British journal of pharmacology 138 26075331
2018 Endoreplication: The Good, the Bad, and the Ugly. Trends in cell biology 134 29567370
2010 Acyl glucuronides: the good, the bad and the ugly. Biopharmaceutics & drug disposition 131 20830700
2021 Vimentin and cytokeratin: Good alone, bad together. Seminars in cancer biology 126 34953942
2015 Suicide and sleep: Is it a bad thing to be awake when reason sleeps? Sleep medicine reviews 126 26706755
2001 Baculoviruses and apoptosis: the good, the bad, and the ugly. Cell death and differentiation 123 11313715
2021 Losing DNA methylation at repetitive elements and breaking bad. Epigenetics & chromatin 114 34082816
2018 Breaking Bad: How Viruses Subvert the Cell Cycle. Frontiers in cellular and infection microbiology 113 30510918
2019 Autophagy in Neurotrauma: Good, Bad, or Dysregulated. Cells 108 31295858
2006 REST in good times and bad: roles in tumor suppressor and oncogenic activities. Cell cycle (Georgetown, Tex.) 107 16929174
2001 Sepsis-induced immunosuppression: from bad to worse. Immunologic research 105 11817325
2017 Multinucleated Giant Cells: Good Guys or Bad Guys? Tissue engineering. Part B, Reviews 104 28825357
2017 RIPK3 in cell death and inflammation: the good, the bad, and the ugly. Immunological reviews 103 28462521
2017 STATs in NK-Cells: The Good, the Bad, and the Ugly. Frontiers in immunology 101 28149296
2005 Aneuploidy: a matter of bad connections. Trends in cell biology 100 16023855
2017 Checks and balances: The glucocorticoid receptor and NFĸB in good times and bad. Frontiers in neuroendocrinology 99 28502781
2021 Hydroxyurea-The Good, the Bad and the Ugly. Genes 96 34356112
2009 The good and the bad of chemokines/chemokine receptors in melanoma. Pigment cell & melanoma research 95 19222802
2020 Ethanol metabolism: The good, the bad, and the ugly. Medical hypotheses 91 32113062
2024 Classifying cancer-associated fibroblasts-The good, the bad, and the target. Cancer cell 90 39255773
2019 The balancing act of R-loop biology: The good, the bad, and the ugly. The Journal of biological chemistry 90 31843970
2015 When Too Much ATP Is Bad for Protein Synthesis. Journal of molecular biology 90 26150063
2013 Pathogenic arterial remodeling: the good and bad of microRNAs. American journal of physiology. Heart and circulatory physiology 89 23396454
2019 Hepatic senescence, the good and the bad. World journal of gastroenterology 86 31558857
2019 Quiescence: Good and Bad of Stem Cell Aging. Trends in cell biology 80 31248787
2015 Minireview: Were the IGF Signaling Inhibitors All Bad? Molecular endocrinology (Baltimore, Md.) 79 26366975
2010 Is soy consumption good or bad for the breast? The Journal of nutrition 78 20980638
2014 Inclusion bodies: not that bad…. Frontiers in microbiology 77 24592259
2002 Survival signaling goes BAD. Developmental cell 77 12431365
2017 When the good go bad: Mutant NPM1 in acute myeloid leukemia. Blood reviews 75 29157973
2022 NRF2 and Diabetes: The Good, the Bad, and the Complex. Diabetes 74 36409792
2016 Interferons and HIV Infection: The Good, the Bad, and the Ugly. Pathogens & immunity 72 27500281
2018 Rubisco is not really so bad. Plant, cell & environment 70 29359811
2017 The good and bad faces of the CXCR4 chemokine receptor. The international journal of biochemistry & cell biology 70 29288743
2017 Bad phosphorylation as a target of inhibition in oncology. Cancer letters 68 29175460
2017 Bad wrap: Myelin and myelin plasticity in health and disease. Developmental neurobiology 67 28986960
2018 RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease. The Journal of biological chemistry 66 29802200
2016 Methamphetamine Addiction Vulnerability: The Glutamate, the Bad, and the Ugly. Biological psychiatry 65 27890469
2007 Inflammation and polyamine catabolism: the good, the bad and the ugly. Biochemical Society transactions 65 17371265
2007 Amplification of zinc finger gene 217 (ZNF217) and cancer: when good fingers go bad. Biochimica et biophysica acta 65 17572303
2015 Aging and radiation: bad companions. Aging cell 62 25645467
2016 Hippo signaling in the kidney: the good and the bad. American journal of physiology. Renal physiology 60 27194720
2014 Clostridium and bacillus binary enterotoxins: bad for the bowels, and eukaryotic being. Toxins 60 25198129
2015 Premature aging/senescence in cancer cells facing therapy: good or bad? Biogerontology 57 26330289
2006 Galactosemia: the good, the bad, and the unknown. Journal of cellular physiology 56 17001680
2022 The diverse functions of FAT1 in cancer progression: good, bad, or ugly? Journal of experimental & clinical cancer research : CR 51 35965328
2018 MECHANISMS IN ENDOCRINOLOGY: Bone marrow adiposity and bone, a bad romance? European journal of endocrinology 50 30299886
2016 The Farnesoid X Receptor: Good for BAD. Cellular and molecular gastroenterology and hepatology 50 28174746
2012 The bad, the good, and the ugly about oxidative stress. Oxidative medicine and cellular longevity 49 22619696
2009 The TRAIL to viral pathogenesis: the good, the bad and the ugly. Current molecular medicine 48 19519406
2019 Tau Secretion: Good and Bad for Neurons. Frontiers in neuroscience 47 31293374
2015 The good and bad of antioxidant foods: An immunological perspective. Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association 47 25698357
2023 Circadian Rhythms and Astrocytes: The Good, the Bad, and the Ugly. Annual review of neuroscience 46 36854316
2015 BAD-mediated apoptotic pathway is associated with human cancer development. International journal of molecular medicine 46 25653146
2013 Wrapping up the bad news: HIV assembly and release. Retrovirology 45 23305486
2017 Recombination: the good, the bad and the variable. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 44 29109232
2006 Tuberin activates the proapoptotic molecule BAD. Oncogene 44 16702951
1999 Mitochondrial DNA--all things bad? Trends in genetics : TIG 43 10203801
2022 Plant-Based Proteins: The Good, Bad, and Ugly. Annual review of food science and technology 42 34982579
2021 Pterygium-The Good, the Bad, and the Ugly. Cells 42 34206333
2013 Sperm mitochondria in reproduction: good or bad and where do they go? Journal of genetics and genomics = Yi chuan xue bao 42 24238608
2022 Good, bad, and neglectful: Astrocyte changes in neurodegenerative disease. Free radical biology & medicine 41 35202786
2008 Senescence: the good the bad and the dysfunctional. Current opinion in genetics & development 41 18262406
2021 Consequence of distinctive expression of MUC2 in colorectal cancers: How much is actually bad? Biochimica et biophysica acta. Reviews on cancer 39 34139275
2020 The Good, the Bad, the Question-H19 in Hepatocellular Carcinoma. Cancers 38 32429417
2008 In good times and bad: p73 in cancer. Cell cycle (Georgetown, Tex.) 38 18583938

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