| 2025 |
Cryo-EM structure reveals that ASX-173 binds a unique hydrophobic pocket formed by AMP, Mg2+, and pyrophosphate in the C-terminal synthetase domain of human ASNS; in vitro kinetic and thermal shift assays show ASX-173 binds the ASNS/Mg2+/ATP complex as an uncompetitive inhibitor, reducing cellular asparagine levels and inducing the integrated stress response. |
Cryo-EM structure determination, in vitro kinetic assays, thermal shift assays, cellular asparagine measurement |
bioRxivpreprint |
High |
bio_10.1101_2025.10.16.682859
|
| 2023 |
Purified FLAG-tagged ASNS variants R49Q, G289A, and T337I associated with ASNS deficiency show reductions in enzymatic activity of 90%, 36%, and 96% respectively, as measured by AMP production in vitro, establishing that disease-causing ASNS mutations reduce catalytic activity. |
In vitro enzymatic assay (AMP detection) of purified FLAG-tagged ASNS variants from stably expressing HEK 293T cells |
Biology methods & protocols |
High |
37965492
|
| 2006 |
In cybrid cells harboring MELAS and NARP mtDNA mutations, ASNS transcription is upregulated via ATF4 binding to the NSRE-1 (nutrient-sensing response element-1) in the ASNS promoter; ATF4 knockdown by RNAi reduced ASNS transcription, establishing ATF4 as a transcriptional activator of ASNS. |
Reporter assay (NSRE-1 element), RNA interference (ATF4 knockdown), DNA microarray, western blot |
Mitochondrion |
Medium |
17276738
|
| 2013 |
During amino acid response (AAR) activation, ATF4 is recruited to the ASNS promoter, accompanied by increases in histone H3K4me3 and H4 acetylation marks and a concurrent loss of total histone H3 near the promoter; removal of AAR stress rapidly reverses H4Ac and ATF4 binding but not H3K4me3, and a second AAR challenge does not alter the kinetics of ASNS induction. |
Chromatin immunoprecipitation (ChIP), transcription run-on assays, histone modification analysis in HepG2 cells |
The Biochemical journal |
Medium |
22978410
|
| 2018 |
GCN2 kinase is required for ASNS induction in response to L-asparaginase-induced asparagine depletion; pharmacological GCN2 inhibition prevents ASNS upregulation and sensitizes ASNS-low cancer cells (ALL, AML, pancreatic cancer) to asparaginase in vitro and in vivo, placing GCN2 upstream of ASNS in the amino acid response pathway. |
GCN2 inhibitor treatment, gene-expression profiling, in vitro cell viability, in vivo mouse xenograft models |
Proceedings of the National Academy of Sciences of the United States of America |
Medium |
30061420
|
| 2023 |
ATF4 directly binds the ASNS promoter region (ChIP-qPCR) and its overexpression upregulates p-GCN2 and ASNS expression, while ATF4 knockdown reduces ASNS transcription, confirming ATF4 as a direct transcriptional activator of ASNS in colon cancer cells. |
ChIP-qPCR, RT-qPCR, western blot, ATF4 knockdown and overexpression in SW480 cells |
Scientific reports |
Medium |
38844625
|
| 2023 |
TLK2 promotes ASNS expression via two mechanisms: (1) TLK2 directly interacts with ATF4 (a transcription factor for ASNS) and promotes its expression at the mRNA level; (2) mTORC1 directly interacts with ASNS protein and inhibits its ubiquitin-proteasome degradation. TLK2 knockdown suppresses amino acid synthesis by downregulating the mTORC1 pathway and ASNS expression. |
IP-MS, co-immunoprecipitation, ubiquitination assay, pathway inhibitor/activator experiments, western blot |
Cancer gene therapy |
Medium |
37542132
|
| 2024 |
METTL3-mediated m6A modification of ASNS mRNA promotes its stability; METTL3 inhibition (STM2457) or knockdown reduces m6A modification on ASNS mRNA, decreasing ASNS mRNA stability and protein expression; ASNS overexpression rescues growth defects caused by METTL3 inhibition. |
MeRIP-qPCR, mRNA stability assay (actinomycin D), western blot, overexpression rescue, dual-luciferase reporter |
Journal of Cancer |
Medium |
39132158
|
| 2025 |
HDAC5 deacetylates RXRA at K410 and K412, stabilizing RXRA by reducing ubiquitination; deacetylated RXRA acts as a transcriptional repressor of ASNS by binding the -1114/-1104 region of the ASNS promoter, thereby suppressing asparagine synthesis. CCT196969 inhibits HDAC5, leading to increased RXRA acetylation and decreased ASNS transcription. |
Co-immunoprecipitation, ChIP assay, luciferase reporter assay, mass spectrometry (deacetylation site mapping), CETSA, SPR, IP/ubiquitination assay |
Journal of experimental & clinical cancer research |
Medium |
40781327
|
| 2026 |
VHL E3 ubiquitin ligase interacts with ASNS protein and promotes its ubiquitination and degradation; ASNS overexpression activates PI3K-AKT and MAPK signaling pathways by binding to and inhibiting Junction plakoglobin (JUP) expression, promoting RCC cell growth and metastasis. |
Immunoprecipitation, ubiquitination modification proteomics, western blotting, TMT proteomics, RNA sequencing, cell phenotype and animal experiments |
International journal of biological sciences |
Medium |
41943831
|
| 2025 |
GPS2 binds ATF4 protein and stabilizes it by blocking the interaction between ATF4 and its E3 ubiquitin ligase BTRC, thereby preventing ubiquitin-proteasome degradation of ATF4 and maintaining elevated ASNS expression, which confers L-asparaginase resistance in ALL cells. |
Co-immunoprecipitation (GPS2-ATF4 and ATF4-BTRC interactions), ubiquitination assay, GPS2 knockdown in vitro and xenograft in vivo |
Carcinogenesis |
Medium |
40693356
|
| 2020 |
ASNS CpG island promoter is allele-specifically methylated in BCP-ALL cells (aberrant imprinting), which silences ASNS gene expression; higher ASNS methylation correlates with lower ASNS protein expression and higher L-asparaginase sensitivity in three BCP-ALL cohorts. This methylation is associated with aberrant methylation of an imprinted gene cluster at 7q21. |
Bisulfite sequencing, methylation analysis, allele-specific methylation mapping, protein expression analysis, in vitro asparaginase sensitivity assays, ETV6-RUNX1 knockin mouse model |
Blood |
Medium |
32573712
|
| 2022 |
In vitro, supraphysiological or physiological concentrations of asparagine suppress de novo asparagine biosynthesis by ASNS regardless of ASNS expression level, as shown by [U-13C5]-L-glutamine isotope tracing; overexpressing ASNS in ASNase-sensitive B cell lymphoma was insufficient to confer resistance to ASNase in vivo. |
13C isotope tracing ([U-13C5]-L-glutamine) in vitro and in vivo, ASNS overexpression in mouse B cell lymphoma model |
Science advances |
Medium |
35857457
|
| 2022 |
ASNS expression peaks in effector CD8+ T cells and declines during memory formation; ASNS overexpression promotes an effector phenotype and enhances anti-tumor responses of adoptively transferred CD8+ T cells in a mouse melanoma model, establishing ASNS expression dynamics as a functional modulator of T cell differentiation. |
Single-cell RNA sequencing, ASNS overexpression in CD8+ T cells, adoptive transfer in mouse melanoma model, functional differentiation assays |
Cell reports |
Medium |
36384124
|
| 2023 |
DOT1L inhibition reduces EZH2/PRC2 pathway activity, which converges on increased ASNS expression; overexpression of ASNS in apical progenitors (APs) phenocopies DOT1L inhibition by increasing neuronal differentiation, placing ASNS downstream of DOT1L/EZH2 epigenetic regulation in cortical neurogenesis. |
DOT1L inhibitor treatment, single-cell RNA sequencing, lineage tracing, ASNS overexpression in neural progenitors, clonal analysis |
EMBO reports |
Medium |
37382163
|
| 2025 |
METTL1-mediated m7G modification of ASNS mRNA increases its stability and expression in hepatocellular carcinoma; METTL1 knockdown reduces ASNS mRNA stability and expression, while METTL1 drives HCC progression through ASNS-dependent asparagine metabolism and mTOR pathway activation. |
Multi-omics analysis (m7G modification mapping), mRNA stability assay, METTL1 knockdown and overexpression, mTOR pathway analysis |
Oncogene |
Low |
42045536
|
| 2021 |
In Saccharomyces cerevisiae, ASNS (Asn1) forms cytoophidia (filamentous assemblies) that are shorter than CTP synthase (CTPS) cytoophidia; disruption of ASNS shortens CTPS cytoophidial length, but CTPS deletion does not affect ASNS cytoophidium formation or ASNS protein level. ASNS overexpression in diauxic phase induces multi-dot structures, suggesting protein level drives cytoophidia formation. |
Genetic deletion (ASNS and CTPS knockouts in yeast), fluorescence microscopy of cytoophidia, protein level analysis |
G3 (Bethesda, Md.) |
Low |
33561249
|
| 2025 |
ASNS protein binds USP13 and increases USP13 expression; in ARPE-19 retinal epithelial cells, ASNS overexpression reduces ROS production and SA-β-gal staining (senescence marker), and enhances glycolysis and oxidative phosphorylation, suggesting ASNS acts through an ASNS/USP13 axis to protect against oxidative stress. |
Co-immunoprecipitation (ASNS-USP13), ASNS overexpression, ROS measurement, SA-β-gal staining, ECAR/OCR measurement in ARPE-19 cells |
BioFactors (Oxford, England) |
Low |
41293996
|
| 2025 |
PGG (1,2,3,4,6-O-Pentagalloylglucose) inhibits purified recombinant human ASNS with KD = 8.8 μM and IC50 = 7.1 μM in enzymatic assay, thereby increasing cellular L-aspartate levels and activating the LKB1/AMPK metabolic axis, reducing hepatic lipid accumulation in mice on high-fat/high-cholesterol diet. |
FEP-based virtual screening, binding affinity assay (KD), in vitro enzymatic inhibition assay (IC50), cellular aspartate measurement, LKB1/AMPK pathway analysis, in vivo mouse MASLD model |
International immunopharmacology |
Medium |
40409103
|
| 2025 |
ASX-173 is a cell-permeable small molecule that inhibits ASNS at nanomolar concentrations; combination of ASX-173 with L-asparaginase disrupts nucleotide synthesis and induces cell cycle arrest and apoptosis; in a mouse AML xenograft model, the combination significantly delayed tumor growth. |
Biochemical ASNS inhibition assay, cell viability assays, cell cycle/apoptosis analysis, nucleotide synthesis measurement, mouse xenograft model |
bioRxivpreprint |
Medium |
bio_10.1101_2025.07.03.662851
|