Affinage

ARRDC1

Arrestin domain-containing protein 1 · UniProt Q8N5I2

Length
433 aa
Mass
46.0 kDa
Annotated
2026-06-09
12 papers in source corpus 6 papers cited in narrative 6 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ARRDC1 is a plasma membrane α-arrestin adaptor that couples substrate recognition to ubiquitin-mediated turnover and drives the budding of extracellular vesicles (PMID:23886940, PMID:30035390). It heterodimerizes with β-arrestins and uses its PPxY motifs to directly recruit the Itch E3 ubiquitin ligase, forming a tripartite complex that ubiquitylates substrates and routes them to lysosomal/proteasomal degradation; mutation of the PPxY motifs abolishes this activity (PMID:23886940). Through this PPxY/Itch axis it promotes degradation of non-activated Notch (PMID:23886940) and binds the WW domains of YAP1 to control YAP1 protein stability, with loss of ARRDC1-driven YAP1 turnover relieving suppression of renal cell carcinoma growth, migration, invasion, and EMT (PMID:29416926). Independently of its degradative role, ARRDC1 governs the biogenesis and protein cargo of both exosomes and ectosomes, and its membrane-budding activity can be redirected to actively load defined protein and nucleic-acid cargo into secreted vesicles (PMID:30035390, PMID:38785998, PMID:41392542). The same membrane localization and ubiquitin-ligase-binding motif underlie an antiviral function: ARRDC1 binds alphavirus nonstructural protein nsP4 and promotes its ubiquitination-dependent degradation to restrict Semliki Forest virus replication (PMID:40824091).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2013 High

    Established the core molecular logic of ARRDC1 as an adaptor: how could an α-arrestin direct substrate degradation? It bridges β-arrestins and the Itch E3 ligase via PPxY motifs to ubiquitylate and degrade Notch.

    Evidence Co-IP, PPxY mutant transfection, ubiquitylation and lysosomal degradation assays in β-arrestin-/- and Itch-/- cells

    PMID:23886940

    Open questions at the time
    • Whether Notch is recognized directly by ARRDC1 or via β-arrestin is not resolved
    • Physiological contexts of Notch regulation by ARRDC1 not defined
  2. 2018 High

    Extended the adaptor model to a second substrate and a disease context: ARRDC1 binds YAP1 WW domains through its PPXY motifs and drives Itch-mediated YAP1 degradation, positioning ARRDC1 as a tumor suppressor in renal cell carcinoma.

    Evidence AP-MS, reciprocal Co-IP, PPXY/WW domain mapping, shRNA knockdown, proliferation/migration/invasion/EMT assays

    PMID:29416926

    Open questions at the time
    • In vivo tumor evidence not established
    • Relative contribution of proteasomal vs lysosomal degradation unclear
  3. 2018 Medium

    Defined a degradation-independent role: how does ARRDC1 shape extracellular vesicle output? Genetic loss alters the protein cargo of both exosomes and ectosomes.

    Evidence Arrdc1-/- MEFs, nanoparticle tracking, proteomic profiling of isolated EVs

    PMID:30035390

    Open questions at the time
    • Mechanism by which ARRDC1 selects specific cargo classes not defined
    • Single cell type (MEF), not confirmed across tissues
  4. 2024 Medium

    Demonstrated that ARRDC1 actively loads cargo into vesicles rather than passively associating: ARRDC1-p53 fusion enriches p53 protein and mRNA in small EVs and boosts sEV production.

    Evidence ARRDC1-p53 fusion overexpression in HEK293T, sEV marker Western blots, functional assays in recipient cells

    PMID:38785998

    Open questions at the time
    • Overexpression/fusion strategy may not reflect endogenous cargo loading
    • Mechanism of mRNA recruitment unknown
  5. 2025 Medium

    Showed ARRDC1's budding activity is engineerable: ARRDC1-mediated microvesicles carrying protein, mRNA, or CRISPR-Cas9 can be surface-targeted for selective in vivo delivery.

    Evidence Engineered ARMMs with targeting ligands, in vitro and in vivo delivery and gene-editing readouts

    PMID:41392542

    Open questions at the time
    • Engineering proof-of-concept rather than endogenous mechanism
    • Endogenous physiological cargo and triggers of budding not addressed
  6. 2025 High

    Connected ARRDC1's degradative adaptor function to host defense: it binds alphavirus nsP4 and promotes its ubiquitination-dependent degradation to restrict viral replication, requiring membrane localization and the PPxY motif.

    Evidence siRNA knockdown, CRISPR/Cas9 KO, trans-complementation, ARRDC1–nsP4 Co-IP, PPxY mutant analysis, viral replication assays

    PMID:40824091

    Open questions at the time
    • Whether the same Itch ligase mediates nsP4 ubiquitination not shown
    • Breadth of antiviral activity against other viruses not defined

Open questions

Synthesis pass · forward-looking unresolved questions
  • How ARRDC1 selects its diverse substrates and EV cargo, and whether its degradative and vesicle-budding functions are mechanistically linked, remains unresolved.
  • No structural model of ARRDC1 substrate or cargo recognition
  • Determinants distinguishing degradative targeting from EV cargo loading unknown

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0060090 molecular adaptor activity 3 GO:0098772 molecular function regulator activity 2
Localization
GO:0031410 cytoplasmic vesicle 3 GO:0005886 plasma membrane 1
Pathway
R-HSA-392499 Metabolism of proteins 3 R-HSA-5653656 Vesicle-mediated transport 3

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2013 ARRDC1 (α-arrestin 1) heterodimerizes with β-arrestins and uses its PPxY motifs to directly bind the Itch E3 ubiquitin ligase, forming a tripartite complex that promotes Itch-mediated ubiquitylation and lysosomal degradation of non-activated Notch receptor; mutation of ARRDC1 PPxY motifs reduces Notch ubiquitylation and impairs lysosomal degradation. Co-immunoprecipitation, PPxY mutant transfection, ubiquitylation assays, lysosomal degradation assays in β-arrestin-/- and Itch-/- cells Journal of cell science High 23886940
2018 ARRDC1 interacts with YAP1 via its PPXY motifs (binding the WW domains of YAP1) and facilitates Itch E3 ubiquitin ligase-mediated ubiquitination and proteasomal/lysosomal degradation of YAP1, thereby negatively regulating YAP1 protein stability and suppressing renal cell carcinoma cell growth, migration, invasion, and EMT. Tandem affinity purification/mass spectrometry, co-immunoprecipitation, lentiviral shRNA knockdown, functional cell assays (proliferation, migration, invasion, EMT) American journal of cancer research High 29416926
2018 ARRDC1 regulates the release of both exosomes and ectosomes (extracellular vesicles) and controls their protein cargo; deletion of Arrdc1 in mouse embryonic fibroblasts alters EV protein composition, including enrichment of mitochondrial proteins in ectosomes and depletion of apoptotic cleavage/cornified envelope proteins in exosomes. Arrdc1-/- mouse embryonic fibroblasts, nanoparticle tracking analysis, proteomic analysis of isolated EVs Proteomics Medium 30035390
2025 ARRDC1 restricts Semliki Forest virus (alphavirus) replication by binding to viral nonstructural protein 4 (nsP4) and facilitating its ubiquitination-dependent degradation; this antiviral function requires ARRDC1's plasma membrane localization and its ubiquitin ligase binding motif (PPxY). siRNA knockdown, CRISPR/Cas9 knockout, trans-complementation, Co-immunoprecipitation (ARRDC1–nsP4 interaction), viral replication assays, PPxY motif mutant analysis Journal of virology High 40824091
2024 Fusion of ARRDC1 to p53 (ARRDC1-p53) substantially increases loading of p53 fusion protein and its mRNA into small extracellular vesicles (sEVs), demonstrating that ARRDC1 serves as an active cargo-loading mechanism for sEV biogenesis; overexpression of ARRDC1 also boosts sEV production (elevated TSG101 and LAMP1). Overexpression of ARRDC1-p53 fusion constructs in HEK293T, Western blot for sEV markers, functional apoptosis/proliferation assays in recipient cells Biomolecules Medium 38785998
2025 Engineered ARRDC1-mediated microvesicles (ARMMs) can be loaded with protein, mRNA, or CRISPR-Cas9 cargo and deliver them intracellularly; surface decoration with cell-targeting ligands enables selective delivery to CD8+ T cells or parvalbumin-positive neurons in vivo, demonstrating that ARRDC1's membrane budding activity can be harnessed for programmable intracellular cargo delivery. Engineered ARMM production with targeted surface proteins, in vitro and in vivo delivery assays, functional gene editing readouts Journal of extracellular vesicles Medium 41392542

Source papers

Stage 0 corpus · 12 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2018 Arrestin-Domain Containing Protein 1 (Arrdc1) Regulates the Protein Cargo and Release of Extracellular Vesicles. Proteomics 57 30035390
2013 Α-arrestin 1 (ARRDC1) and β-arrestins cooperate to mediate Notch degradation in mammals. Journal of cell science 48 23886940
2018 ARRDC1 and ARRDC3 act as tumor suppressors in renal cell carcinoma by facilitating YAP1 degradation. American journal of cancer research 41 29416926
2022 MicroRNA miR-124-3p suppresses proliferation and epithelial-mesenchymal transition of hepatocellular carcinoma via ARRDC1 (arrestin domain containing 1). Bioengineered 17 35300565
2021 PAX5-activated lncRNA ARRDC1-AS1 accelerates the autophagy and progression of DLBCL through sponging miR-2355-5p to regulate ATG5. Life sciences 15 34499929
2020 Long noncoding RNA ARRDC1-AS1 is activated by STAT1 and exerts oncogenic properties by sponging miR-432-5p/PRMT5 axis in glioma. Biochemical and biophysical research communications 11 33220929
2024 Fusion with ARRDC1 or CD63: A Strategy to Enhance p53 Loading into Extracellular Vesicles for Tumor Suppression. Biomolecules 8 38785998
2023 Breast cancer stem cell-derived extracellular vesicles transfer ARRDC1-AS1 to promote breast carcinogenesis via a miR-4731-5p/AKT1 axis-dependent mechanism. Translational oncology 8 36801666
2025 Targeted Intracellular Delivery via Precision Programming of ARRDC1-Mediated Microvesicles. Journal of extracellular vesicles 4 41392542
2025 Scalable production and purification of engineered ARRDC1-mediated microvesicles in a HEK293 suspension cell system. Scientific reports 2 40025043
2025 ARRDC1 inhibits the replication of Semliki Forest virus by regulating the ubiquitination and degradation of viral nsP4. Journal of virology 1 40824091
2026 Parallel Single-Tissue Summary-Data Mendelian Randomization and Functional Validation Identify the ARRDC1 Promoter SNP rs4494021 as a Genetic Marker Associated with Anxiety Disorders. Neuropsychiatric disease and treatment 0 42038593

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