Affinage

ANKRD52

Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C · UniProt Q8NB46

Length
1076 aa
Mass
115.1 kDa
Annotated
2026-06-09
17 papers in source corpus 5 papers cited in narrative 5 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ANKRD52 is the ankyrin-repeat regulatory subunit of the protein phosphatase 6 (PP6) heterotrimer, where it assembles with the PP6 catalytic subunit and a SAPS-domain PP6R subunit to confer substrate specificity on the complex (PMID:18186651). It was identified by mass spectrometry as a PP6 holoenzyme component, binding the C-terminal scaffold region of PP6R1, which holds separate docking sites for the catalytic and ankyrin-repeat subunits, with endogenous holoenzymes eluting as >440 kDa heterotrimers (PMID:18186651). Functionally, the ANKRD52-PP6 complex maintains the global efficiency of miRNA-mediated silencing by dephosphorylating AGO2 at a conserved S824-S834 cluster; target engagement triggers hierarchical phosphorylation of AGO2 by CSNK1A1, and rapid dephosphorylation by ANKRD52-PPP6C resets AGO2 for productive target binding, with loss of this cycle expanding the AGO2 target repertoire and diluting the active phosphatase-reset pool per target (PMID:28114302). The same complex dephosphorylates PAK1 to restrain cell migration, and ANKRD52 transcription is repressed by TAZ (PMID:33096142). Through its control of miRNA silencing, ANKRD52 sustains miR-155-mediated repression of SOCS1, so its inactivation—or reintroduction of cancer patient mutations—dampens JAK-STAT/interferon-γ signaling and antigen presentation, allowing tumor cells to evade T cell-mediated cytotoxicity (PMID:34853298).

Mechanistic history

Synthesis pass · year-by-year structured walk · 5 steps
  1. 2008 High

    Established that ANKRD52 is not a free-standing protein but an integral ankyrin-repeat regulatory subunit of the PP6 phosphatase heterotrimer, defining the architecture in which a SAPS-domain subunit scaffolds the catalytic and ankyrin-repeat subunits.

    Evidence FLAG Co-IP, mass spectrometry, size-exclusion chromatography and siRNA knockdown with IκBε degradation readout

    PMID:18186651

    Open questions at the time
    • Direct functional role of ANKRD52 itself (vs paralog Ankrd28) was inferred from family behavior
    • No substrate of the ANKRD52-PP6 complex identified at this stage
    • Structural basis of substrate-specificity conferred by the ankyrin repeats unresolved
  2. 2017 High

    Answered what physiological substrate the ANKRD52-PP6 complex acts on, showing it dephosphorylates AGO2 to sustain global miRNA silencing through a CSNK1A1-driven phosphorylation/dephosphorylation cycle.

    Evidence Genome-wide CRISPR loss-of-function screen, miRNA fluorescent reporter, AGO2 phospho-site mutagenesis and transcriptome-wide AGO2 CLIP-seq

    PMID:28114302

    Open questions at the time
    • Structural detail of how ANKRD52 recognizes the AGO2 phospho-cluster not resolved
    • Whether ANKRD52 directs other PP6 substrates beyond AGO2 not addressed here
  3. 2020 Medium

    Extended the substrate range and added upstream regulation, showing ANKRD52-PP6 dephosphorylates PAK1 to limit migration and that TAZ transcriptionally represses ANKRD52.

    Evidence TAZ knockdown with ANKRD52 promoter-reporter, mass spectrometry, PAK1 phosphorylation assay and cell mobility assay with ANKRD52 overexpression

    PMID:33096142

    Open questions at the time
    • Single-lab findings not independently replicated
    • Direct vs indirect dephosphorylation of PAK1 by the complex not fully separated
    • Mechanism of TAZ-mediated promoter repression not defined
  4. 2021 High

    Connected ANKRD52's role in miRNA silencing to tumor immune evasion, showing its loss disrupts miR-155 repression of SOCS1 and thereby dampens interferon-γ responsiveness and T cell killing.

    Evidence CRISPR library screen in syngeneic mouse tumors, T cell co-culture under immune pressure, patient-mutation reintroduction and miR-155/SOCS1 epistasis

    PMID:34853298

    Open questions at the time
    • Whether AGO2 dephosphorylation is the specific node linking ANKRD52 to miR-155 function not directly demonstrated
    • Clinical relevance of specific patient mutations to phosphatase activity not biochemically dissected
  5. 2024 Low

    Reaffirmed the PP6 heterotrimer model including ANKRD52 as a scaffold subunit in colorectal cancer, while attributing the stemness phenotype primarily to PP6c-PP6R3.

    Evidence siRNA knockdown of PP6c, colony formation assay, in vivo xenograft and stemness-gene transcriptome analysis

    PMID:39014521

    Open questions at the time
    • ANKRD52's specific contribution not tested; functional data focus on PP6c and PP6R3
    • No direct ANKRD52 knockdown or substrate assay in this context

Open questions

Synthesis pass · forward-looking unresolved questions
  • How ANKRD52's ankyrin repeats structurally select among PP6 substrates (AGO2, PAK1) and whether additional substrates couple it to other pathways remains unresolved.
  • No structure of ANKRD52 within the PP6 holoenzyme or bound to substrate
  • Substrate-selection rules conferred by the ankyrin-repeat subunit undefined
  • Tissue-specific and physiological scope of ANKRD52-PP6 substrates incomplete

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0098772 molecular function regulator activity 2 GO:0140096 catalytic activity, acting on a protein 2 GO:0060090 molecular adaptor activity 1
Pathway
R-HSA-168256 Immune System 1 R-HSA-8953854 Metabolism of RNA 1
Complex memberships
PP6 phosphatase heterotrimer

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2008 ANKRD52 (PP6-ARS-C) is a regulatory subunit of the PP6 holoenzyme heterotrimer. It was identified by mass spectrometry as co-precipitating with FLAG-PP6R1 (a SAPS domain subunit). Tagged Ankrd28 (the closest paralog studied in detail) coprecipitated with PP6 catalytic subunit and with SAPS domain subunits PP6R1 and PP6R3. The C-terminal region of PP6R1 was sufficient to coprecipitate Ankrd28/Ankrd52-family proteins but not PP6 itself, demonstrating PP6R1 acts as a scaffold with separate binding regions for the catalytic subunit and the ankyrin repeat subunit. Endogenous PP6 holoenzymes with PP6R1 and PP6R3 eluted at >440 kDa from size-exclusion chromatography together with Ankrd28, consistent with a heterotrimer. Knockdown of PP6R1 or Ankrd28, but not PP6R3, enhanced IκBε degradation in response to TNFα, indicating functional specificity of the ankyrin repeat subunit. FLAG co-immunoprecipitation, mass spectrometry, size-exclusion chromatography, siRNA knockdown with IκBε degradation assay Biochemistry High 18186651
2017 ANKRD52 is the regulatory subunit of the ANKRD52-PPP6C phosphatase complex that dephosphorylates AGO2 at a cluster of conserved residues (S824-S834). Target engagement by AGO2 triggers hierarchical multi-site phosphorylation by CSNK1A1, followed by rapid dephosphorylation by the ANKRD52-PPP6C complex. AGO2 phosphorylation at these residues inhibits target mRNA binding. Inactivation of this phosphorylation cycle globally impairs miRNA-mediated silencing. Non-phosphorylatable AGO2 shows a pronounced expansion of its transcriptome-wide target repertoire at steady-state, reducing the active AGO2 pool per target. CRISPR genome-wide loss-of-function screen, fluorescent miRNA reporter, biochemical/genetic epistasis, AGO2 phospho-site mutagenesis, AGO2 CLIP-seq (transcriptome-wide binding profiling) Nature High 28114302
2020 TAZ transcriptionally represses ANKRD52: knockdown of TAZ leads to enhanced ANKRD52 promoter activity and increased ANKRD52 mRNA levels. ANKRD52, as a subunit of the PP6 holoenzyme, interacts with PAK1 (identified by mass spectrometry). Knockdown of ANKRD52 or PP6c results in elevated PAK1 phosphorylation, while forced ANKRD52 expression attenuates cell mobility. ANKRD52 thus regulates cell migration through PP6c-mediated dephosphorylation of PAK1. TAZ siRNA knockdown with ANKRD52 promoter-reporter assay, mass spectrometry (ANKRD52-PP6c-PAK1 interaction), siRNA knockdown of ANKRD52/PP6c with PAK1 phosphorylation readout, cell mobility assay with ANKRD52 overexpression Biochimica et biophysica acta. Molecular cell research Medium 33096142
2021 Genetic inactivation of ANKRD52, or re-introduction of frequent ANKRD52 patient mutations found in cancers, dampens JAK-STAT-interferon-γ signaling and antigen presentation in cancer cells, largely by abolishing miR-155-targeted silencing of SOCS1. This was established by combining CRISPR library screens in syngeneic mouse tumor models with co-culture systems under immune pressure, demonstrating that the ANKRD52-containing miRNA machinery maintains cancer cell sensitivity to T cell-mediated cytotoxicity. CRISPR library screen in syngeneic mouse tumor model, co-culture system with T cells, ANKRD52 patient-mutation re-introduction, JAK-STAT pathway and antigen presentation readouts, miR-155/SOCS1 epistasis Nature communications High 34853298
2024 In colorectal cancer, PP6 functions as a heterotrimer comprising PP6c, PP6R subunits (PP6R1-3), and scaffold subunits including ANKRD52. The PP6c-PP6R3 complex (not specifically ANKRD52) was identified as a key player in regulating cancer stem cell markers; PP6c knockdown decreased colony-forming ability and in vivo proliferation. This study confirms the heterotrimer model for PP6 assembly including ANKRD52 as a scaffold subunit. siRNA knockdown of PP6c, colony formation assay, in vivo xenograft, transcriptome analysis of stemness genes Cancer science Low 39014521

Source papers

Stage 0 corpus · 17 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2013 Circular intronic long noncoding RNAs. Molecular cell 1879 24035497
2017 An Argonaute phosphorylation cycle promotes microRNA-mediated silencing. Nature 204 28114302
2008 Protein phosphatase 6 regulatory subunits composed of ankyrin repeat domains. Biochemistry 96 18186651
2021 Linking circular intronic RNA degradation and function in transcription by RNase H1. Science China. Life sciences 87 34453665
2019 High throughput circRNA sequencing analysis reveals novel insights into the mechanism of nitidine chloride against hepatocellular carcinoma. Cell death & disease 66 31506425
2017 Next-Generation Rapid Autopsies Enable Tumor Evolution Tracking and Generation of Preclinical Models. JCO precision oncology 40 29333526
2017 Cross-species analysis of the canine and human bladder cancer transcriptome and exome. Genes, chromosomes & cancer 29 28052524
2021 Tumor evolution selectively inactivates the core microRNA machinery for immune evasion. Nature communications 21 34853298
2021 A Genome-Wide Association Study of Novel Genetic Variants Associated With Anthropometric Traits in Koreans. Frontiers in genetics 13 34054925
2020 Uncovering the cellular capacity for intensive and specific feedback self-control of the argonautes and MicroRNA targeting activity. Nucleic acids research 10 32297952
2020 TAZ negatively regulates the novel tumor suppressor ANKRD52 and promotes PAK1 dephosphorylation in lung adenocarcinomas. Biochimica et biophysica acta. Molecular cell research 9 33096142
2024 Protein phosphatase 6 promotes stemness of colorectal cancer cells. Cancer science 4 39014521
2025 An exploratory study of high-throughput transcriptomic analysis reveals novel mRNA biomarkers for acute myocardial infarction using integrated methods. Scientific reports 2 40069305
2025 Genome-Wide Association Study for Weight-Related Traits in Scylla paramamosain Using Whole-Genome Resequencing. Animals : an open access journal from MDPI 2 40646730
2023 PLK1 Regulates MicroRNA Biogenesis through Drosha Phosphorylation. International journal of molecular sciences 2 37762595
2025 Proteomic profiling identifies miR-423-5p as a modulator of oncogenic metabolism in HCC. Journal of translational medicine 0 40993657
2024 Clinical and Immunological Significance of ANKRD52 in Pan-Cancer. Biochemical genetics 0 38296907

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