| 1993 |
ADA3 (NGG1) was identified as a yeast gene whose mutations prevent toxicity of GAL4-VP16; double disruption of ada2 and ada3 showed no additive growth defect, placing ADA3 in the same pathway as ADA2. Selection of transcription initiation sites in vitro was altered in ada3 mutants, suggesting a role in the response to acidic activators. |
Genetic epistasis (double mutant analysis), in vitro transcription initiation assay |
Molecular and cellular biology |
Medium |
8413201
|
| 1993 |
NGG1 (ADA3) was identified as required for glucose repression of GAL4p-activated genes; its activity was GAL4-dependent and promoter analysis showed a correlation between the number of GAL4p binding sites and NGG1p activity, establishing a functional role in repression at GAL4-regulated promoters. |
Genetic screen, promoter deletion analysis, reporter assays in yeast |
The EMBO journal |
Medium |
8262068
|
| 1995 |
ADA2, ADA3, and GCN5 form a heterotrimeric complex in vitro, with ADA2 serving as the linchpin holding ADA3 and GCN5 together. The C-terminal domain of ADA3 is sufficient for complex formation, while the N-terminal domain mediates interaction between activation domains and the ADA complex. |
In vitro reconstitution, domain deletion analysis, in vivo activation assays |
Molecular and cellular biology |
High |
7862114
|
| 1996 |
NGG1p/ADA3p requires residues 274-373 (including an amphipathic alpha-helix rich in Phe residues) for glucose repression. Single and double disruptions of ngg1 and ada2 had comparable effects on glucose repression, confirming they act in the same complex. An ADA2p-interaction site was mapped to residues 308-373 of NGG1p. |
Deletion mutagenesis, genetic epistasis, in vivo reporter assays |
The Journal of biological chemistry |
Medium |
8621592
|
| 1997 |
NGG1p/ADA3p and ADA2p are co-immunoprecipitated from yeast whole-cell extracts (less than 2% of ADA2p was not associated with NGG1p), and each protein's stability depends on the other. NGG1p-containing complexes of approximately 200 kDa, 900 kDa, and >2 MDa were resolved, and TBP co-immunoprecipitated with NGG1p in a manner requiring NGG1p residues 274-307. |
Co-immunoprecipitation, ion-exchange chromatography, gel filtration |
The Journal of biological chemistry |
High |
9038164
|
| 1997 |
ADA1 interacts with ADA3 and other ADA complex members as shown by partial purification and immunoprecipitation, and the ADA/GCN5 complex has an estimated molecular mass of approximately 2 MDa. ADA1 and ADA5 mutations produce more severe defects than ada2/ada3/gcn5 mutations, suggesting two functional classes within the complex. |
Partial complex purification, co-immunoprecipitation, genetic phenotypic analysis |
Molecular and cellular biology |
Medium |
9154821
|
| 2001 |
Yeast Ada2, Ada3, and Gcn5 form the catalytic core of ADA and SAGA HAT complexes; this trimeric core is necessary and sufficient for nucleosomal HAT activity and lysine specificity in vitro. Ada3 is necessary for Gcn5-dependent nucleosomal HAT activity in yeast extracts; Ada2 potentiates Gcn5 catalytic activity, while Ada3 facilitates nucleosomal acetylation and expanded lysine specificity. |
In vitro reconstitution of HAT activity with nucleosome substrates, yeast extract HAT assays |
The Journal of biological chemistry |
High |
11773077
|
| 2001 |
hADA3 physically interacts with p53 in human cells; this interaction is enhanced after DNA damage due to phosphorylation of the p53 N-terminus. hADA3 is required for full p53 transcriptional activity and p53-mediated apoptosis, and was identified as a component of histone acetyltransferase complexes. |
Yeast p53 dissociator assay, co-immunoprecipitation in human cells, functional transcription and apoptosis assays |
The EMBO journal |
High |
11707411
|
| 2002 |
hADA3 binds selectively to high-risk HPV E6 proteins (not low-risk) and is targeted for E6-induced degradation. HPV E6 mutants that cannot degrade p53 but can interact with hADA3 abrogate p53-mediated transactivation and G1 arrest after DNA damage, revealing a p53-degradation-independent mechanism of p53 inactivation via hADA3. |
Co-immunoprecipitation, protein degradation assays, transcriptional reporter assays, cell cycle analysis |
Molecular and cellular biology |
High |
12138191
|
| 2002 |
hADA3 directly binds RXRalpha in vitro and in vivo, and is part of activator complexes bound to native RXR response elements within the p21 promoter as shown by chromatin immunoprecipitation. hADA3 enhances RXRalpha-mediated transactivation of retinoid target genes, and HPV E6 inhibits this RXRalpha-mediated transactivation by targeting hADA3. |
In vitro binding assay, co-immunoprecipitation, chromatin immunoprecipitation, transcriptional reporter assay |
The Journal of biological chemistry |
High |
12235159
|
| 2002 |
Mouse mADA3-containing TFTC (TBP-free-TAF-containing) complex interacts with ERalpha in a ligand-independent manner; mADA3 itself does not directly interact with nuclear receptors despite containing two LxxLL NR boxes, indicating other complex subunits mediate the interaction. |
Co-immunoprecipitation, cloning and characterization of mouse ADA3 |
Nucleic acids research |
Medium |
12034840
|
| 2004 |
hADA3 directly interacts with ERalpha and ERbeta; hADA3 is a component of activator complexes bound to the native ER response element in the pS2 promoter (shown by ChIP); RNA interference-mediated knockdown of endogenous hADA3 inhibited ER-mediated transactivation and estrogen-induced expression of pS2, cathepsin D, and progesterone receptor. |
Co-immunoprecipitation, chromatin immunoprecipitation, RNA interference, transcriptional reporter assay, RT-PCR |
The Journal of biological chemistry |
High |
15496419
|
| 2007 |
hAda3 stabilizes p53 protein by promoting its acetylation at p300/CBP sites; hAda3-dependent acetylation is required for increased p53 stability and target gene induction. Endogenous hAda3 is essential for DNA damage-induced acetylation and stabilization of p53, placing hAda3 as a component of p300/CBP-containing coactivator complexes that mediate p53 acetylation. |
shRNA knockdown, inducible overexpression, site-directed mutagenesis of p53 acetylation sites, co-immunoprecipitation |
The Journal of biological chemistry |
High |
17272277
|
| 2007 |
p14ARF-induced senescence requires hAda3; expression of the N-terminal domain of hAda3 (which binds p53 but not p300) blocked p14ARF-induced p53 acetylation and senescence. hAda3 overexpression increased p300-mediated p53 acetylation, and siRNA knockdown decreased p53 acetylation and p21cip1 accumulation in response to p14ARF. |
Domain expression (N-terminal fragment), siRNA knockdown, HPV16 E6 mutant Y54D selective degradation, p53 acetylation assays |
Oncogene |
High |
17452980
|
| 2007 |
Ada3, ERalpha, and three HATs (p300, PCAF, and Gcn5) are present in a complex demonstrated by glycerol gradient cosedimentation and immunoprecipitation. shRNA-mediated knockdown of Ada3 in ER-positive breast cancer cells significantly reduced ligand-dependent recruitment of p300, PCAF, and Gcn5 to the ER-responsive pS2 promoter, and Ada3 is critical for estrogen-dependent proliferation. |
Glycerol gradient cosedimentation, co-immunoprecipitation, chromatin immunoprecipitation, shRNA knockdown, 2D/3D proliferation assays |
Cancer research |
High |
18089809
|
| 2007 |
hADA2a and hADA3 physically interact with beta-catenin through its Armadillo repeats 6-12 and C-terminal transactivation domain; both proteins reside with beta-catenin at the c-Myc enhancer. RNAi-mediated reduction of hADA2a and hADA3 results in reduced beta-catenin acetylation, reduced reporter activity, and reduced activation of endogenous Wnt target genes. |
Co-immunoprecipitation, chromatin immunoprecipitation, RNA interference, transcriptional reporter assays, domain mapping |
Cancer biology & therapy |
Medium |
18059173
|
| 2007 |
Drosophila dADA3 localizes to chromosomes and its levels are significantly reduced in dGcn5 and dAda2a (but not dAda2b) mutant backgrounds. dAda3 mutants show reduced acetylation specifically at histone H3 K9 and K14 (not K18) and H4 K12 (not K5, K8, K16), and reduced H3 S10 phosphorylation also seen in dGcn5 mutants. dADA3 is required for oogenesis and somatic cell viability. |
Genetic mutant analysis, immunostaining for histone modifications, localization studies, genetic interaction |
Molecular and cellular biology |
High |
17967867
|
| 2008 |
ANCO-1 and ANCO-2 interact with ADA3; the interaction occurs between the conserved C-terminal domain of ANCO-1 and the N-terminal transactivation domain of ADA3. ANCO-1 colocalizes with ADA3, ADA2alpha/beta, and PCAF at nuclear dots in vivo. ANCO-1 and ANCO-2 repress ADA3-mediated transcriptional co-activation on nuclear receptors, while ANCO-1 stimulates p53-mediated transactivation. |
Co-immunoprecipitation, domain mapping, immunofluorescence co-localization, transcriptional reporter assay |
The Biochemical journal |
Medium |
18377363
|
| 2008 |
HPV16 E6 mutants that degrade hAda3 but not p53 abrogate p14ARF-induced growth arrest and efficiently immortalize mammary epithelial cells despite normal p53 levels, establishing that hAda3 degradation (not only p53 degradation) is sufficient for inactivation of the p14ARF-p53 pathway. |
HPV16 E6 mutant analysis, protein degradation assays, cell proliferation/immortalization assays |
Journal of virology |
Medium |
18256148
|
| 2009 |
HPV16 E6-induced degradation of hADA3 in cervical carcinoma cells is E6AP-dependent; siRNA knockdown of E6 or E6AP increased hADA3 protein levels, decreased cellular proliferation, and increased apoptotic rate. |
siRNA knockdown, protein expression analysis, proliferation and apoptosis assays |
Cancer investigation |
Medium |
19194825
|
| 2010 |
hADA3 interacts directly with RARalpha in a hormone-dependent manner through its LxxLL motifs engaging the receptor coactivator pocket; loss- and gain-of-function mutations in LxxLL motifs and the receptor coactivator pocket confirmed this mechanism. hADA3 associates with RARalpha target gene promoters in a hormone-dependent manner, and ADA3 knockdown impairs RARbeta2 expression. |
Co-immunoprecipitation, site-directed mutagenesis (LxxLL motifs and receptor coactivator pocket), chromatin immunoprecipitation, siRNA knockdown, structural modeling |
Nucleic acids research |
High |
20413580
|
| 2012 |
Germline deletion of Ada3 in mouse is embryonic lethal; conditional deletion in MEFs causes severe proliferation defect, G1-to-S delay due to accumulation of CDK inhibitor p27 (an indirect effect of Ada3-regulated c-Myc transcription), mitotic defects, and drastic changes in global histone acetylation. |
Germline and conditional knockout mouse, adenovirus-Cre deletion of Ada3(FL/FL) MEFs, rescue by human Ada3 expression, cell cycle analysis, microarray, histone modification analysis |
The Journal of biological chemistry |
High |
22736770
|
| 2012 |
Ada3 deletion leads to increased markers of DNA damage (pATM, gammaH2AX, p53BP1, pRAD51) in untreated cells and a significant delay in disappearance of DNA damage foci after ionizing radiation. Ada3-null cells show enhanced chromosomal aberrations (breaks, fragments, deletions, translocations), establishing Ada3 as required for the DNA repair process and genomic stability. |
Conditional Ada3 knockout (adenovirus-Cre in Ada3(fl/fl) MEFs), immunofluorescence for DNA damage markers, chromosomal aberration analysis, comet assay |
Cell cycle |
High |
23095635
|
| 2013 |
Three novel hADA3-interacting partners were identified by yeast two-hybrid: AATF (apoptosis-antagonizing transcription factor), PPP1R7 (PP1 regulatory subunit), and PPP2R5D (PP2A regulatory subunit). The C-terminal ADA2-interacting domain of hADA3 was not required for these interactions. Co-localization and co-immunoprecipitation in human cells confirmed the interactions. |
Yeast two-hybrid screen, co-immunoprecipitation, fluorescence microscopy, transcriptional reporter assay |
The Biochemical journal |
Medium |
23167988
|
| 2014 |
PCAF and ADA3 regulate granzyme B-mediated Bid cleavage upstream of mitochondrial membrane permeabilization; knockdown of PCAF or ADA3 reduced PACS2 expression, and PACS2 knockdown phenocopied the PCAF/ADA3 knockdown effect on Bid processing and cytochrome c release, placing ADA3-PCAF upstream of PACS2 in the granzyme B apoptosis pathway. |
shRNA screen, siRNA knockdown, cytochrome c release assay, Bid cleavage assay, genetic epistasis by PACS2 knockdown |
Cell death and differentiation |
High |
24464226
|
| 2014 |
HPV16 E6 targets hADA3 for ubiquitin-mediated degradation via E6AP ubiquitin ligase; hADA3 undergoes SUMOylation that is accelerated in the presence of HPV16E6 and makes hADA3 unstable. Depletion of Ubc9 (SUMO E2 enzyme) prevented rapid hADA3 degradation, establishing that SUMOylation precedes and promotes E6-mediated ubiquitination of hADA3. |
Co-immunoprecipitation, ubiquitination assay, SUMOylation assay, Ubc9 depletion, protein stability assays |
Carcinogenesis |
Medium |
24795430
|
| 2015 |
ADA3 associates with the higher-order repeat region of alpha-satellite DNA on human X chromosome centromeres, and directly interacts with centromere protein CENP-B through its N-terminus (shown by proximity ligation assay, immunofluorescence, and deletional analysis). Knockdown of ADA3 decreased CENP-B loading onto centromeres, and a CENP-B binding-deficient ADA3 mutant failed to rescue cell proliferation in Ada3-deleted MEFs. |
Proximity ligation assay, immunofluorescence, deletion mutagenesis, ChIP on alpha-satellite DNA, CENP-B loading assay, proliferation rescue assay |
The Journal of biological chemistry |
High |
26429915
|
| 2016 |
ADA3 is acetylated in a cell cycle-dependent manner by GCN5, PCAF, and p300; SIRT1 is identified as a deacetylase that opposes this acetylation. Mass spectrometry and site-directed mutagenesis identified major acetylation sites. Acetylation-defective ADA3 mutants could interact with HATs but failed to restore global or locus-specific histone acetylation or cell proliferation in Ada3-deleted MEFs, establishing that ADA3 acetylation is functionally required. |
Mass spectrometry, site-directed mutagenesis, co-immunoprecipitation, HAT activity assays, rescue of Ada3-deleted MEFs |
Molecular and cellular biology |
High |
27402865
|
| 2017 |
AKT activation downstream of EGFR/HER2 promotes phosphorylation of p300, which in turn promotes acetylation of ADA3. Lapatinib-mediated inhibition of HER1/HER2 reduced phospho-AKT, p300 phosphorylation, and ADA3 protein levels in a proteasome-dependent manner. An ADA3 K→R acetylation-site mutant showed increased half-life, consistent with competing acetylation and ubiquitination on shared lysines, establishing an RTK-AKT-p300-ADA3 signaling axis. |
Kinase inhibitor treatment (lapatinib), p300 phosphorylation assay, ADA3 stability assays, site-directed mutagenesis (K→R), proteasome inhibitor |
Cell cycle |
Medium |
28759294
|
| 2016 |
ADA3 overexpression in mammary epithelial cells and ER+ breast cancer cells enhanced cell proliferation associated with increased cyclin B, c-MYC, SKP2, and early response gene mRNA (c-FOS, EGR1, c-MYC), and decreased p27, establishing that ADA3-driven c-MYC expression mediates its proliferative role. |
Ectopic overexpression, RT-PCR, Western blotting, cell proliferation assays |
Breast cancer research |
Medium |
27852327
|