Affinage

ACTRT1

Actin-related protein T1 · UniProt Q8TDG2

Length
376 aa
Mass
41.7 kDa
Annotated
2026-06-09
15 papers in source corpus 7 papers cited in narrative 7 extracted findings
Cross-family judge vs UniProt: tie faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ACTRT1 (ARP-T1) is a testis-enriched actin-related protein that acts as a structural organizer of the sperm head and, in somatic contexts, as a regulator of ciliary length, Hedgehog signaling, and tumor vasculature (PMID:12243744, PMID:28869610, PMID:33972689, PMID:35616329). In differentiating spermatids it is a major acidic component of the perinuclear theca/calyx and assembles into a multimeric complex with ACTRT2, ACTL7A, ACTL9, and ACTRT3 in the subacrosomal region (PMID:12243744, PMID:35616329, PMID:41668650). Within this complex, ACTRT1 anchors the developing acrosome to the nucleus by bridging the inner acrosomal membrane protein SPACA1 to the nuclear envelope proteins PARP11 and SPATA46; its loss loosens the acroplaxome, detaches the acrosome, produces malformed heads, and depletes and mislocalizes ACTL7A and PLCζ, causing severe subfertility in knockout mice and acrosomal detachment with fertilization failure in men carrying whole-gene ACTRT1 deletions (PMID:35616329, PMID:38414365). Beyond the testis, ACTRT1 localizes to the basal body of primary cilia and the midbody and sustains ciliary length, with patient tissue bearing ACTRT1 mutations showing reduced cilia (PMID:33972689). As a tumor suppressor it binds the GLI1 promoter directly to repress GLI1 expression and dampen Hedgehog pathway activation (PMID:28869610), yet in tumor endothelium it promotes growth by driving endothelial sprouting and vessel maturation (PMID:41197408). Whether these somatic activities share a common molecular basis with its structural role in the perinuclear theca has not been resolved in the available corpus.

Mechanistic history

Synthesis pass · year-by-year structured walk · 7 steps
  1. 2002 Medium

    Established ACTRT1 as a bona fide actin-related protein and pinpointed its identity as a testis-restricted structural component of the sperm head, framing it as a candidate cytoskeletal organizer rather than a generic actin.

    Evidence Partial amino acid sequencing of bull sperm calyx preparations with immunoblot and immunofluorescence localization to the perinuclear theca

    PMID:12243744

    Open questions at the time
    • No interacting partners or molecular function defined
    • Functional consequence of localization not tested
    • Single species (bull) without genetic perturbation
  2. 2017 High

    Revealed an unexpected nuclear, gene-regulatory function: ACTRT1 directly represses the Hedgehog effector GLI1, defining it as a tumor suppressor in Hedgehog-driven cancers and decoupling its somatic role from a purely structural one.

    Evidence GLI1 promoter binding assays, loss-of-function, and exogenous expression rescue with in vitro and in vivo proliferation assays

    PMID:28869610

    Open questions at the time
    • Mechanism of promoter recognition by an actin-related protein not resolved
    • Whether ACTRT1 acts alone or within a chromatin complex unknown
    • No structural basis for DNA binding
  3. 2021 High

    Connected ACTRT1 to ciliary and cytokinetic structures, showing it controls ciliary length and providing an interactome linking it to ciliogenesis, endosomal recycling, and septin machinery — a candidate route to its somatic phenotypes.

    Evidence Immunofluorescence localization to basal body and midbody, mass-spectrometry interactome, knockdown with ciliary length measurement, and patient tissue correlation

    PMID:33972689

    Open questions at the time
    • Direct partner mediating ciliary length control not isolated from the interactome
    • Relationship between ciliary defect and Hedgehog repression not integrated
    • Mechanism of basal body recruitment unknown
  4. 2022 High

    Defined ACTRT1's core spermatogenic mechanism: it nucleates a perinuclear theca complex and physically tethers the acrosome to the nucleus, explaining the structural requirement for normal sperm head morphology and fertility.

    Evidence Reciprocal co-immunoprecipitation of ACTRT2/ACTL7A/ACTL9, Actrt1-knockout mouse phenotyping, and interaction mapping to SPACA1, PARP11, and SPATA46

    PMID:35616329

    Open questions at the time
    • Stoichiometry and architecture of the multimeric complex unresolved
    • Why ACTL7A and PLCζ levels drop upon ACTRT1 loss mechanistically unclear
    • No structural model of the anchoring interface
  5. 2024 Medium

    Translated the mouse mechanism to human disease, showing whole-gene ACTRT1 deletion causes acrosomal detachment and fertilization failure with the same ACTL7A/PLCζ mislocalization, confirming conserved relevance to human male infertility.

    Evidence Whole exome/genome sequencing of affected men with Western blot, immunostaining, and electron microscopy of patient sperm

    PMID:38414365

    Open questions at the time
    • Limited to two human cases
    • Whether residual fertility or assisted-reproduction outcomes vary not addressed
    • Causal chain from deletion to PLCζ loss not mechanistically dissected
  6. 2025 High

    Uncovered a pro-angiogenic role distinct from its tumor-suppressor function, showing ACTRT1 in tumor endothelium drives sprouting and vessel maturation, revealing context-dependent and even opposing effects on tumor growth.

    Evidence Actrt1-knockout mice with B16F1/MC38 tumor models, bone marrow chimeras, aortic ring sprouting, hindlimb ischemia, Matrigel plug, and single-cell RNA-seq of endothelium

    PMID:41197408

    Open questions at the time
    • Molecular effector linking ACTRT1 to endothelial maturation not identified
    • Relationship to its Hedgehog/GLI1 activity in endothelium untested
    • No structural or biochemical mechanism for the angiogenic function
  7. 2026 Medium

    Extended the perinuclear theca complex roster by showing ACTRT3 associates with ACTRT1, reinforcing ACTRT1 as a stable subunit of a multi-actin-related-protein assembly that also contains SPEM2 and ZPBP.

    Evidence Co-immunoprecipitation in an Actrt3-knockout mouse model

    PMID:41668650

    Open questions at the time
    • Single-method Co-IP, incidental to the ACTRT3-focused study
    • Functional consequence of the ACTRT1–ACTRT3 interaction not tested
    • No reciprocal validation for this specific pairing

Open questions

Synthesis pass · forward-looking unresolved questions
  • Whether ACTRT1's structural role in the perinuclear theca and its somatic activities (GLI1 repression, ciliary length control, endothelial sprouting) reflect a shared biochemical mechanism or distinct context-specific functions remains unresolved.
  • No unifying molecular activity reconciling cytoskeletal, chromatin, and ciliary roles
  • No high-resolution structure of any ACTRT1 complex
  • Mechanism of nuclear DNA binding by an actin-related protein undefined

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0005198 structural molecule activity 2 GO:0003677 DNA binding 1 GO:0008092 cytoskeletal protein binding 1
Localization
GO:0005634 nucleus 2 GO:0005635 nuclear envelope 1 GO:0005815 microtubule organizing center 1 GO:0005929 cilium 1
Pathway
R-HSA-1474165 Reproduction 2 R-HSA-1643685 Disease 2 R-HSA-162582 Signal Transduction 1
Complex memberships
perinuclear theca subacrosomal complex (ACTRT1/ACTRT2/ACTL7A/ACTL9/ACTRT3)

Evidence

Reading pass · 7 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2002 ARP-T1 (ACTRT1) is a novel actin-related protein that localizes specifically to the calyx of the mammalian sperm head perinuclear theca, identified as a major acidic component by partial amino acid sequencing of calyx preparations from bull spermatozoa and confirmed by immunoblotting and immunofluorescence microscopy. Its expression is restricted to the testis, appearing late in spermatid differentiation. Partial amino acid sequencing, immunoblotting, immunofluorescence microscopy, subcellular fractionation Experimental cell research Medium 12243744
2017 ARP-T1 directly binds to the GLI1 promoter, thereby inhibiting GLI1 expression and suppressing Hedgehog signaling pathway activation; loss of ARP-T1 leads to Hedgehog pathway activation, and exogenous ACTRT1 expression reduces in vitro and in vivo proliferation of cell lines with aberrant Hedgehog signaling. Chromatin binding assays (GLI1 promoter binding), loss-of-function experiments, exogenous expression assays, in vitro and in vivo proliferation assays Nature medicine High 28869610
2021 ARP-T1 (ACTRT1) localizes to the midbody during cytokinesis and to the basal body of primary cilia during interphase; an ARP-T1 interactome includes proteins involved in ciliogenesis, endosomal recycling, and septin ring formation. ACTRT1 knockdown in cultured cells reduces ciliary length, and tissue from BDCS patients with ACTRT1 mutations shows reduced ciliary length correlating with ARP-T1 protein levels. Immunofluorescence localization, mass spectrometry interactome (PXD016557), ACTRT1 knockdown, ciliary length measurement in patient tissue and knockdown cells Communications biology High 33972689
2022 ACTRT1, ACTRT2, ACTL7A, and ACTL9 proteins interact to form a multimeric complex localizing to the subacrosomal region of spermatids. ACTRT1 anchors developing acrosomes to the nucleus by interacting with inner acrosomal membrane protein SPACA1 and nuclear envelope proteins PARP11 and SPATA46. Loss of ACTRT1 in knockout mice causes loosened acroplaxome structure during spermiogenesis, acrosome detachment from sperm nuclei, malformed heads, reduced ACTL7A and PLCζ protein content, and severe subfertility despite normal sperm count and motility. Co-immunoprecipitation, Actrt1-knockout mouse generation and phenotyping, immunofluorescence, Western blotting, fertility assays Development (Cambridge, England) High 35616329
2024 ACTRT1 deficiency in humans (whole-gene deletion) causes sperm acrosomal ultrastructural defects (acrosomal detachment) and fertilization failure; ACTL7A and PLCζ (phospholipase C zeta) are decreased and ectopically distributed in sperm from ACTRT1-deleted men, consistent with findings in Actrt1-KO mice. Whole exome sequencing, whole genome sequencing, PCR, quantitative PCR, Western blotting, immunostaining, electron microscopy, Papanicolaou staining Human reproduction (Oxford, England) Medium 38414365
2025 Actrt1 promotes tumor growth through non-hematopoietic endothelium by sustaining endothelial sprouting and vessel maturation. Actrt1-/- mice show reduced growth of B16F1 and MC38 tumors; bone marrow chimera experiments localize the phenotype to the non-hematopoietic compartment. ACTRT1 protein is detected in CD31+ tumor vessels. Actrt1 deficiency reduces endothelial sprouting from aortic rings, delays recovery after hindlimb ischemia, and shifts endothelial transcriptome toward immaturity by single-cell RNA-seq, while developmental retinal vascularization is preserved. Actrt1-knockout mice, bone marrow chimera experiments, immunofluorescence, aortic ring sprouting assay, hindlimb ischemia model, Matrigel plug assay, single-cell RNA-seq, histology Biochemical and biophysical research communications High 41197408
2026 ACTRT3 (ACTRT1 paralog, distinct gene) co-immunoprecipitates with ACTRT1, confirming that ACTRT1 is a component of the perinuclear theca protein complex also containing ACTRT2, ACTL7A, SPEM2, and ZPBP. Co-immunoprecipitation in Actrt3-/- mouse model Development (Cambridge, England) Medium 41668650

Source papers

Stage 0 corpus · 15 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2002 Novel actin-related proteins Arp-T1 and Arp-T2 as components of the cytoskeletal calyx of the mammalian sperm head. Experimental cell research 60 12243744
2017 Mutations in ACTRT1 and its enhancer RNA elements lead to aberrant activation of Hedgehog signaling in inherited and sporadic basal cell carcinomas. Nature medicine 54 28869610
2024 Toward clinical exomes in diagnostics and management of male infertility. American journal of human genetics 39 38614076
2022 Loss of perinuclear theca ACTRT1 causes acrosome detachment and severe male subfertility in mice. Development (Cambridge, England) 29 35616329
2024 Whole exome sequencing analysis of 167 men with primary infertility. BMC medical genomics 17 39267058
2022 Germline intergenic duplications at Xq26.1 underlie Bazex-Dupré-Christol basal cell carcinoma susceptibility syndrome. The British journal of dermatology 16 35986704
2021 Pathogenic Variants in ACTRT1 Cause Acephalic Spermatozoa Syndrome. Frontiers in cell and developmental biology 16 34422805
2021 ARP-T1-associated Bazex-Dupré-Christol syndrome is an inherited basal cell cancer with ciliary defects characteristic of ciliopathies. Communications biology 12 33972689
2024 Deletion of ACTRT1 is associated with male infertility as sperm acrosomal ultrastructural defects and fertilization failure in human. Human reproduction (Oxford, England) 11 38414365
2024 Silencing immune-infiltrating biomarker CCDC80 inhibits malignant characterization and tumor formation in gastric cancer. BMC cancer 8 38872096
2022 The Expression Patterns of Human Cancer-Testis Genes Are Induced through Epigenetic Drugs in Colon Cancer Cells. Pharmaceuticals (Basel, Switzerland) 7 36355490
2026 Actin-related protein T3 is required for acrosome biogenesis and sperm function in mice. Development (Cambridge, England) 0 41668650
2026 Testis-specific lncRNA Teshl regulates acrosome biogenesis to maintain sperm structure and function. Cell & bioscience 0 41913266
2025 Loss of Actrt1 in non-hematopoietic stroma suppresses pathological angiogenesis and tumor progression. Biochemical and biophysical research communications 0 41197408
2025 A Novel Variant of the ACTRT1 Gene Is Potentially Associated with Oligoasthenoteratozoospermia, Acrosome Detachment, and Fertilization Failure. Genes 0 41465095

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