Affinage

ABHD17C

Alpha/beta hydrolase domain-containing protein 17C · UniProt Q6PCB6

Length
329 aa
Mass
35.8 kDa
Annotated
2026-06-09
13 papers in source corpus 7 papers cited in narrative 6 extracted findings
Cross-family judge vs UniProt: tie faithfulness: 5/5 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ABHD17C is a substrate-specific serine hydrolase that acts as a protein depalmitoylase (acyl protein thioesterase), removing S-palmitoyl groups from target proteins to control their membrane association, subcellular distribution, stability, and downstream signaling (PMID:26701913). Its activity is distinct from APT1/APT2: it catalyzes palmitate removal from N-Ras and PSD95 and drives N-Ras re-localization from the plasma membrane to internal membranes, an activity dependent on its catalytic serine (PMID:26701913). Across multiple contexts, ABHD17C-mediated depalmitoylation acts as a regulatory switch—de-S-acylation of the innate immune receptor NOD2 reduces its plasma membrane localization and dampens NF-κB-driven inflammatory cytokine output, marking ABHD17C as a negative regulator of NOD2 signaling (PMID:40054525, PMID:38187608); depalmitoylation of ALOX15B and of BCL6B (at Cys442) triggers their membrane-to-cytoplasm translocation and subsequent ubiquitin-proteasome degradation, the latter via the CUL4/DDB1/DCAF10 ligase complex (PMID:40569151, PMID:42154583). Its own plasma membrane targeting and catalytic activity require palmitoylation of a conserved middle-region cysteine cluster (PMID:41155484), and the enzyme is post-translationally controlled by USP35-dependent deubiquitination that stabilizes it (PMID:37993419) and by ERK1-mediated phosphorylation downstream of mutant KRAS that promotes its activity (PMID:40569151). Through these substrate-directed actions, ABHD17C influences tumor cell proliferation, ferroptosis sensitivity, and immune evasion in several cancer models (PMID:37993419, PMID:40569151, PMID:42154583).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2015 High

    Established that ABHD17C is a bona fide protein depalmitoylase with substrate specificity distinct from the classical APT1/APT2 thioesterases, answering whether dedicated enzymes beyond APTs control palmitate turnover on signaling proteins.

    Evidence Dual pulse-chase of palmitate vs protein half-life, activity-based serine hydrolase profiling, catalytic mutant and APT1/2 inhibition, live-cell N-Ras imaging

    PMID:26701913

    Open questions at the time
    • Did not define the full substrate repertoire
    • No structural basis for substrate selection
    • Mechanism of in vivo regulation not addressed
  2. 2023 Medium

    Showed ABHD17C is post-translationally stabilized by the deubiquitinase USP35, linking enzyme abundance to oncogenic PI3K/AKT signaling and defining a layer of upstream control over its protein levels.

    Evidence Reciprocal Co-IP, ubiquitination assay, USP35 knockdown with ABHD17C rescue, and xenograft in hepatocellular carcinoma cells

    PMID:37993419

    Open questions at the time
    • Single lab, not independently replicated
    • Direct depalmitoylase substrates driving PI3K/AKT effect not identified
    • Whether USP35 acts directly on ABHD17C ubiquitin chains unresolved
  3. 2025 High

    Identified the innate immune receptor NOD2 as an ABHD17C substrate, establishing ABHD17 isoforms as negative regulators of NOD2 plasma membrane localization and NF-κB inflammatory signaling.

    Evidence RNAi, small-molecule ABHD17 inhibition, Acyl-RAC, confocal microscopy, and cytokine multiplex assays in engineered epithelial cells

    PMID:38187608 PMID:40054525

    Open questions at the time
    • Isoform-specific contribution of ABHD17C versus A/B not dissected
    • De-S-acylated cysteine site on NOD2 not mapped
    • Physiological/disease relevance in intact tissue not established
  4. 2025 Medium

    Connected ABHD17C activity to upstream KRAS-ERK1 signaling and downstream ferroptosis control, showing ERK1 phosphorylation enhances its depalmitoylation of ALOX15B and routes ALOX15B to CUL4/DDB1/DCAF10-dependent degradation.

    Evidence Phosphorylation and palmitoylation assays, ABHD17C/ALOX15B interaction, proteasome inhibition, patient-derived organoids, xenografts, and MPD small-molecule disruption

    PMID:40569151

    Open questions at the time
    • Single lab, limited independent replication
    • Phosphosite(s) on ABHD17C not defined
    • Generalizability beyond the studied cancer context unclear
  5. 2025 Medium

    Demonstrated site-specific depalmitoylation of BCL6B (Cys442) by ABHD17C blocks importin-α/β nuclear import and drives BCL6B degradation, derepressing CD24 to enable cancer immune evasion from macrophage phagocytosis.

    Evidence Site-specific depalmitoylation, importin interaction and ubiquitination assays, CD24 promoter/transcription readouts, phagocytosis assays, and orthotopic NSG mouse models

    PMID:42154583

    Open questions at the time
    • Single lab
    • Coordination with other ABHD17C substrate-directed pathways unknown
    • Direct enzyme-substrate engagement structure not resolved
  6. 2025 Medium

    Defined how ABHD17C achieves its own membrane localization, showing palmitoylation of a conserved N-terminal/middle-region cysteine cluster is required for plasma membrane targeting and catalytic activity.

    Evidence Alanine-scanning mutagenesis, biochemical acylation assays, and confocal imaging of localization mutants

    PMID:41155484

    Open questions at the time
    • ABHD17C finding secondary to primary ABHD17A study
    • Enzyme(s) palmitoylating ABHD17C not identified
    • Dynamics of self-palmitoylation versus substrate turnover not addressed

Open questions

Synthesis pass · forward-looking unresolved questions
  • How ABHD17C selects among its diverse substrates (N-Ras, PSD95, NOD2, ALOX15B, BCL6B) and how its phosphorylation, self-palmitoylation, and USP35 stabilization are integrated into a unified regulatory logic remains unresolved.
  • No structural model of substrate recognition
  • No comprehensive substrate map
  • Cross-talk between regulatory inputs not reconstituted

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0140096 catalytic activity, acting on a protein 4 GO:0016787 hydrolase activity 2
Localization
GO:0005829 cytosol 2 GO:0005886 plasma membrane 2
Pathway
GO:0140096 catalytic activity, acting on a protein 1

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2015 ABHD17 proteins (including ABHD17C) are novel protein depalmitoylases that catalyze palmitate removal from N-Ras and PSD95; ABHD17C catalytic activity is required for N-Ras depalmitoylation and re-localization from the plasma membrane to internal cellular membranes. APT1/APT2 inhibition (Palmostatin B) does not affect palmitate turnover on N-Ras or PSD95, indicating ABHD17 proteins act as substrate-specific depalmitoylases distinct from APT1/APT2. Dual pulse-chase strategy comparing palmitate and protein half-lives; activity-based protein profiling (serine hydrolase activity profiling); knockdown/inhibition of APT1/APT2; catalytic mutant analysis; live-cell imaging of N-Ras localization eLife High 26701913
2023 USP35 stabilizes ABHD17C by inhibiting its ubiquitin-proteasome-mediated degradation; USP35 physically interacts with ABHD17C and reduces its ubiquitination. Stabilization of ABHD17C by USP35 activates the PI3K/AKT signaling pathway in hepatocellular carcinoma cells, promoting proliferation and migration. Co-immunoprecipitation (USP35-ABHD17C interaction); ubiquitination assay; USP35 knockdown with ABHD17C rescue (overexpression); xenograft tumor assay; immunoblotting Cell death discovery Medium 37993419
2025 ABHD17C (along with ABHD17A and ABHD17B) is the acyl protein thioesterase responsible for deacylation (de-S-acylation) of the innate immune receptor NOD2. Inhibiting ABHD17 isoforms increases plasma membrane localization of NOD2 and enhances NF-κB activation and pro-inflammatory cytokine production in epithelial cells. ABHD17 isoforms thereby act as negative regulators of NOD2 signaling. RNA interference; small-molecule inhibitors of ABHD17; confocal microscopy; acyl-resin-assisted capture (Acyl-RAC); immunoblotting; cytokine multiplex assays in engineered cell lines Cellular and molecular gastroenterology and hepatology High 38187608 40054525
2025 ERK1 (downstream of mutant KRAS) phosphorylates ABHD17C, promoting its depalmitoylase activity toward ALOX15B; ABHD17C-mediated depalmitoylation of ALOX15B causes membrane-to-cytoplasm translocation of ALOX15B and facilitates its proteasome-dependent degradation via the CUL4/DDB1/DCAF10 E3 ligase complex. Disruption of the ABHD17C/ALOX15B interaction by methyl protodioscin (MPD) restores S-palmitoylation and membrane localization of ALOX15B, inducing ferroptosis. Biochemical phosphorylation assays; depalmitoylation/S-palmitoylation assays; protein interaction studies (ABHD17C/ALOX15B); proteasome inhibition; patient-derived organoid assays; in vivo xenograft assay; small-molecule MPD treatment Advanced science (Weinheim, Baden-Wurttemberg, Germany) Medium 40569151
2025 ABHD17C-mediated depalmitoylation of BCL6B at Cys442 impedes importin-α/β-mediated nuclear translocation of BCL6B and drives its ubiquitination-dependent degradation in the cytoplasm. Loss of nuclear BCL6B attenuates transcriptional repression of the anti-phagocytic signal CD24, increases CD24 expression, and enables pancreatic cancer cells to evade macrophage phagocytosis. Depalmitoylation assays (Cys442 site-specific); importin-α/β interaction assays; ubiquitination assays; transcriptional assays (BCL6B repression of CD24 promoter); CD24 expression analysis; macrophage phagocytosis assay; orthotopic NSG mouse models with ABHD17C-deficient cells Advanced science (Weinheim, Baden-Wurttemberg, Germany) Medium 42154583
2025 The conserved N-terminal cysteine cluster palmitoylation code that governs ABHD17A plasma membrane targeting and catalytic activity is conserved in ABHD17C; specifically, modification of the middle-region cysteines is critical for plasma membrane targeting and depalmitoylase activity in ABHD17C as well as ABHD17A and ABHD17B. Alanine-scanning mutagenesis; biochemical acylation assays; confocal microscopy of localization mutants (ABHD17C context verified by sequence analysis and mutagenesis) International journal of molecular sciences Medium 41155484

Source papers

Stage 0 corpus · 13 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2015 ABHD17 proteins are novel protein depalmitoylases that regulate N-Ras palmitate turnover and subcellular localization. eLife 283 26701913
2017 Targeting the Ras palmitoylation/depalmitoylation cycle in cancer. Biochemical Society transactions 66 28630138
2020 Polygenic Profile of Elite Strength Athletes. Journal of strength and conditioning research 42 33278272
2023 USP35 promotes HCC development by stabilizing ABHD17C and activating the PI3K/AKT signaling pathway. Cell death discovery 15 37993419
2019 Primary Tumor Site Specificity is Preserved in Patient-Derived Tumor Xenograft Models. Frontiers in genetics 13 31456818
2025 Attenuating ABHD17 Isoforms Augments the S-acylation and Function of NOD2 and a Subset of Crohn's Disease-associated NOD2 Variants. Cellular and molecular gastroenterology and hepatology 7 40054525
2025 KRAS/ABHD17C/ALOX15B Axis Promotes Pancreatic Cancer Progression via Ferroptosis Evasion. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 7 40569151
2025 Attenuating ABHD17 isoforms augments the S-acylation and function of NOD2 and a subset of Crohn's disease-associated NOD2 variants. bioRxiv : the preprint server for biology 6 38187608
2024 Differential Expression of MicroRNA MiR-145 and MiR-155 Downstream Targets in Oral Cancers Exhibiting Limited Chemotherapy Resistance. International journal of molecular sciences 5 38396844
2025 Single-Cell Sequencing Reveals the Palmitoylation Landscape in Lung Adenocarcinoma and Identifies ABHD17C as a Novel Biomarker. The American journal of pathology 2 40582697
2024 Long non-coding RNA MIR4435-2HG promotes pancreatic cancer progression by regulating ABHD17C through sponging miR-128-3p. Translational cancer research 2 39262472
2025 Palmitoylation Code and Endosomal Sorting Regulate ABHD17A Plasma Membrane Targeting and Activity. International journal of molecular sciences 1 41155484
2026 ABHD17C-Mediated S-Depalmitoylation of BCL6B Enhances CD24 Transcription to Resist Macrophage Phagocytosis in Pancreatic Cancer. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 0 42154583

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