Affinage

ABHD17C

Alpha/beta hydrolase domain-containing protein 17C · UniProt Q6PCB6

Length
329 aa
Mass
35.8 kDa
Annotated
2026-04-28
12 papers in source corpus 7 papers cited in narrative 6 extracted findings

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ABHD17C is a serine hydrolase that functions as a protein depalmitoylase, removing S-palmitoylation from substrates including N-Ras, PSD95, NOD2, and ALOX15B to control their membrane association and downstream signaling (PMID:26701913, PMID:40054525, PMID:40569151). Its own plasma membrane targeting depends on palmitoylation of conserved N-terminal cysteine residues (particularly C14 and C15) and YXXφ-dependent endosomal sorting (PMID:41155484). ABHD17C activity is positively regulated by ERK1-dependent phosphorylation downstream of oncogenic KRAS, linking its depalmitoylase function to KRAS-driven signaling in cancer (PMID:40569151), and its protein stability is maintained by USP35-mediated deubiquitination, which promotes PI3K/AKT pathway activation (PMID:37993419).

Mechanistic history

Synthesis pass · year-by-year structured walk · 6 steps
  1. 2015 High

    The discovery that ABHD17 family members, including ABHD17C, are bona fide serine hydrolase depalmitoylases established a new enzymatic mechanism for Ras and PSD95 depalmitoylation, resolving the long-standing question of which thioesterases catalyze palmitate turnover on these substrates.

    Evidence Activity-based protein profiling, dual pulse-chase palmitate/protein half-life assays, and subcellular localization of N-Ras upon ABHD17C overexpression in mammalian cells

    PMID:26701913

    Open questions at the time
    • Full substrate scope of ABHD17C beyond N-Ras and PSD95 was unknown
    • Regulatory mechanisms controlling ABHD17C catalytic activity were uncharacterized
    • Structural basis for substrate recognition had not been determined
  2. 2023 Medium

    Identification of USP35 as a deubiquitinase that stabilizes ABHD17C protein levels revealed a post-translational layer of regulation, connecting ABHD17C abundance to ubiquitin-proteasome control and downstream PI3K/AKT signaling in hepatocellular carcinoma.

    Evidence Reciprocal Co-IP, ubiquitination assays, knockdown/overexpression rescue in HCC cell lines and xenografts

    PMID:37993419

    Open questions at the time
    • The specific ubiquitin ligase targeting ABHD17C for degradation was not identified
    • Whether USP35-ABHD17C regulation operates in non-HCC contexts is unknown
    • The link to PI3K/AKT was shown functionally but the direct mechanistic intermediary (specific depalmitoylation substrate) was not defined
  3. 2024 Medium

    Demonstration that miR-128-3p directly targets ABHD17C mRNA, sponged by lncRNA MIR4435-2HG, identified a transcriptional/post-transcriptional regulatory axis controlling ABHD17C expression in pancreatic cancer.

    Evidence Dual-luciferase reporter, RNA pull-down, RIP assay, knockdown with proliferation/migration readouts, xenograft

    PMID:39262472

    Open questions at the time
    • Whether the oncogenic phenotype is mediated through specific ABHD17C depalmitoylase substrates was not tested
    • Generalizability beyond pancreatic cancer cell lines is unconfirmed
  4. 2025 High

    Expanding the substrate repertoire, ABHD17C was shown to depalmitoylate NOD2, establishing that ABHD17 family thioesterases regulate innate immune receptor membrane localization and NF-κB-driven cytokine production.

    Evidence RNAi, ABHD17 small-molecule inhibitors, acyl-RAC, confocal microscopy, and cytokine multiplex assays in macrophage-like cells

    PMID:40054525

    Open questions at the time
    • Individual contributions of ABHD17A/B/C to NOD2 depalmitoylation were not fully resolved due to shared inhibitor targeting
    • In vivo relevance to inflammatory bowel disease or other NOD2-linked pathologies was not tested
  5. 2025 Medium

    ERK1-dependent phosphorylation of ABHD17C was found to stimulate its depalmitoylation of ALOX15B, connecting oncogenic KRAS signaling to lipid-metabolic enzyme turnover via membrane-to-cytoplasm translocation and subsequent CUL4/DDB1/DCAF10-mediated proteasomal degradation.

    Evidence Phosphorylation assays, biochemical fractionation, Co-IP with E3 ligase components, organoid and xenograft models, pharmacological disruption of ABHD17C–ALOX15B interaction

    PMID:40569151

    Open questions at the time
    • The specific phosphorylation site(s) on ABHD17C and their structural impact on catalysis are not resolved
    • Whether ERK1-mediated regulation generalizes to other ABHD17C substrates is unknown
  6. 2025 Medium

    Mutagenesis of the conserved N-terminal cysteine cluster revealed that middle-region cysteines C14/C15 are critical for ABHD17C palmitoylation, plasma membrane targeting, and catalytic activity, while YXXφ motif–dependent endosomal sorting is required for membrane delivery.

    Evidence Alanine scanning mutagenesis, subcellular localization imaging, and biochemical acylation assays with ABHD17 family members including ABHD17C

    PMID:41155484

    Open questions at the time
    • The palmitoyltransferase(s) responsible for ABHD17C acylation are not identified
    • No structural model of ABHD17C explains how palmitoylation and the YXXφ motif cooperate in trafficking

Open questions

Synthesis pass · forward-looking unresolved questions
  • A high-resolution structure of ABHD17C, a comprehensive substrate inventory beyond N-Ras/PSD95/NOD2/ALOX15B, and the integration of its multiple regulatory inputs (phosphorylation, ubiquitination, palmitoylation, miRNA) into a unified signaling model remain unresolved.
  • No crystal or cryo-EM structure of any ABHD17 family member
  • Systematic palmitoyl-proteomics to define full ABHD17C substrate scope not performed
  • Relative contributions of ABHD17A/B/C to shared substrates in physiological settings are poorly delineated

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0016787 hydrolase activity 3 GO:0140096 catalytic activity, acting on a protein 3
Localization
GO:0005886 plasma membrane 2
Pathway
R-HSA-162582 Signal Transduction 3 R-HSA-392499 Metabolism of proteins 3 GO:0005886 plasma membrane 2 R-HSA-168256 Immune System 1

Evidence

Reading pass · 6 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2015 ABHD17 proteins (including ABHD17C) are novel serine hydrolase depalmitoylases that catalyze palmitate removal from N-Ras and PSD95; catalytic activity of ABHD17C is required for N-Ras depalmitoylation and re-localization to internal cellular membranes. Dual pulse-chase palmitate/protein half-life assay, activity-based protein profiling, knockdown, overexpression with subcellular localization readout eLife High 26701913
2023 USP35 interacts with ABHD17C and stabilizes it by inhibiting ubiquitin-proteasome-mediated degradation; ABHD17C overexpression rescues defects caused by USP35 knockdown in HCC cells, and this axis activates PI3K/AKT signaling. Co-IP, ubiquitination assay, knockdown/overexpression with proliferation, cell cycle, apoptosis, and xenograft readouts Cell death discovery Medium 37993419
2025 ABHD17C acts as a depalmitoylase for ALOX15B downstream of KRAS-mutant/ERK1 signaling; ERK1-elicited phosphorylation of ABHD17C promotes its depalmitoylation of ALOX15B, causing membrane-to-cytoplasm translocation and subsequent proteasome-dependent degradation of ALOX15B via the CUL4/DDB1/DCAF10 E3 ligase complex. Biochemical fractionation, phosphorylation assays, Co-IP with E3 ligase components, organoid and xenograft models, pharmacological disruption of ABHD17C/ALOX15B interaction Advanced science Medium 40569151
2025 ABHD17A, ABHD17B, and ABHD17C are the acyl protein thioesterases responsible for deacylation (depalmitoylation) of NOD2; inhibiting ABHD17 isoforms increases plasma membrane localization of NOD2, enhancing NF-κB activation and pro-inflammatory cytokine production. RNA interference, small-molecule inhibitors, confocal microscopy, acyl-resin-assisted capture (acyl-RAC), immunoblotting, cytokine multiplex assay Cellular and molecular gastroenterology and hepatology High 38187608 40054525
2025 The middle-region cysteine residues (C14, C15) of the conserved N-terminal cysteine cluster are critical for plasma membrane targeting and catalytic activity of ABHD17 family members, and this requirement is conserved in ABHD17C; YXXØ-dependent endosomal sorting is required for plasma membrane delivery of ABHD17A, with the mechanism conserved in ABHD17C. Alanine scanning mutagenesis, subcellular localization imaging, biochemical acylation assays, code-restricted mutants International journal of molecular sciences Medium 41155484
2024 miR-128-3p directly targets ABHD17C mRNA; the lncRNA MIR4435-2HG sponges miR-128-3p to upregulate ABHD17C expression, promoting pancreatic cancer cell proliferation, migration, and invasion. Dual-luciferase reporter assay, RNA pull-down, RIP assay, qRT-PCR, knockdown with cellular phenotype readouts, xenograft Translational cancer research Medium 39262472

Source papers

Stage 0 corpus · 12 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2015 ABHD17 proteins are novel protein depalmitoylases that regulate N-Ras palmitate turnover and subcellular localization. eLife 273 26701913
2017 Targeting the Ras palmitoylation/depalmitoylation cycle in cancer. Biochemical Society transactions 64 28630138
2020 Polygenic Profile of Elite Strength Athletes. Journal of strength and conditioning research 41 33278272
2023 USP35 promotes HCC development by stabilizing ABHD17C and activating the PI3K/AKT signaling pathway. Cell death discovery 15 37993419
2019 Primary Tumor Site Specificity is Preserved in Patient-Derived Tumor Xenograft Models. Frontiers in genetics 13 31456818
2025 Attenuating ABHD17 isoforms augments the S-acylation and function of NOD2 and a subset of Crohn's disease-associated NOD2 variants. bioRxiv : the preprint server for biology 6 38187608
2025 Attenuating ABHD17 Isoforms Augments the S-acylation and Function of NOD2 and a Subset of Crohn's Disease-associated NOD2 Variants. Cellular and molecular gastroenterology and hepatology 6 40054525
2025 KRAS/ABHD17C/ALOX15B Axis Promotes Pancreatic Cancer Progression via Ferroptosis Evasion. Advanced science (Weinheim, Baden-Wurttemberg, Germany) 6 40569151
2024 Differential Expression of MicroRNA MiR-145 and MiR-155 Downstream Targets in Oral Cancers Exhibiting Limited Chemotherapy Resistance. International journal of molecular sciences 5 38396844
2024 Long non-coding RNA MIR4435-2HG promotes pancreatic cancer progression by regulating ABHD17C through sponging miR-128-3p. Translational cancer research 2 39262472
2025 Single-Cell Sequencing Reveals the Palmitoylation Landscape in Lung Adenocarcinoma and Identifies ABHD17C as a Novel Biomarker. The American journal of pathology 0 40582697
2025 Palmitoylation Code and Endosomal Sorting Regulate ABHD17A Plasma Membrane Targeting and Activity. International journal of molecular sciences 0 41155484