Affinage

ABHD14B

Putative protein-lysine deacylase ABHD14B · UniProt Q96IU4

Length
210 aa
Mass
22.3 kDa
Annotated
2026-06-09
15 papers in source corpus 4 papers cited in narrative 5 extracted findings
Cross-family judge vs UniProt: Affinage preferred faithfulness: 4/4 claims corpus-supported (100%)

Mechanistic narrative

Synthesis pass · prose summary of the discoveries below

ABHD14B is a serine hydrolase that functions as a lysine deacetylase (KDAC), transferring an acetyl group from post-translationally acetylated protein lysine residues onto coenzyme A to generate acetyl-CoA while regenerating the free lysine amine (PMID:31478652). Through this deacetylation/acetyl-transfer activity it acts as a regulator of central carbon metabolism: loss of ABHD14B reduces flux of glucose through glycolysis and the citric acid cycle in mammalian cells, and hepatic depletion in mice produces defective systemic glucose metabolism that is most pronounced during fasting (PMID:35700823). The same KDAC activity is deployed in an antiviral context, where ABHD14B is recruited to hepatitis B virus covalently closed circular DNA (cccDNA) via the cccDNA-binding factor TFII-I and deacetylates cccDNA-associated histones to suppress HBV RNA transcription (PMID:40658808). Sequence determinants that distinguish ABHD14B from the closely related, functionally unannotated ABHD14A have been defined, supporting its specific assignment as the KDAC-active enzyme of the pair (PMID:37974539).

Mechanistic history

Synthesis pass · year-by-year structured walk · 4 steps
  1. 2019 High

    Established the molecular activity of ABHD14B, resolving a previously orphan serine hydrolase into a defined lysine deacetylase that channels protein acetyl groups onto CoA to make acetyl-CoA.

    Evidence In vitro biochemical assay with recombinant human protein plus mammalian cell knockdown and active-site analysis

    PMID:31478652

    Open questions at the time
    • Endogenous physiological substrate lysines not identified
    • Substrate binding site described as putative, not structurally validated against a bound substrate
  2. 2022 High

    Connected the KDAC activity to a physiological output by showing ABHD14B controls glucose flux, demonstrating its enzymatic role is metabolically consequential at the cellular and organismal level.

    Evidence siRNA knockdown with transcriptomics/metabolomics in cells, and hepatic depletion with metabolic phenotyping in mice

    PMID:35700823

    Open questions at the time
    • Direct substrate(s) linking deacetylation to glycolytic/TCA flux not pinpointed
    • Mechanism by which acetyl-CoA generation drives the metabolic phenotype not dissected
  3. 2023 Medium

    Resolved the ambiguity between two highly similar paralogs, defining sequence determinants that assign KDAC activity specifically to ABHD14B and not ABHD14A.

    Evidence Bioinformatics sequence analysis combined with biochemical experiments

    PMID:37974539

    Open questions at the time
    • Function of ABHD14A remains unannotated
    • Single-lab classification, partial mechanistic detail
  4. 2025 Medium

    Extended ABHD14B function to host antiviral defense, showing its deacetylase activity acts on chromatinized viral cccDNA to repress transcription via a defined recruitment factor.

    Evidence CRISPR dCas9-BioID2 proximity labeling, gene knockout, HBV RNA transcription and histone acetylation assays

    PMID:40658808

    Open questions at the time
    • Single-lab, single study with mechanistic chain partly inferred
    • Specific histone lysine residues deacetylated on cccDNA not mapped
    • TFII-I-ABHD14B interaction not independently validated

Open questions

Synthesis pass · forward-looking unresolved questions
  • The endogenous protein substrate repertoire that links ABHD14B deacetylation to glucose metabolism remains undefined.
  • No physiological substrate lysines identified
  • Structural basis of substrate selectivity unresolved
  • Relationship between metabolic and antiviral roles unexplored

Mechanism profile

Synthesis pass · controlled-vocabulary classification · explore literature graph →
Molecular activity
GO:0140096 catalytic activity, acting on a protein 2 GO:0016740 transferase activity 1 GO:0016787 hydrolase activity 1
Pathway
R-HSA-1430728 Metabolism 1 R-HSA-4839726 Chromatin organization 1
Partners

Evidence

Reading pass · 5 per-paper findings extracted from the source corpus
Year Finding Method Journal Conf PMIDs
2019 ABHD14B was annotated as a lysine deacetylase (KDAC) that transfers an acetyl group from a post-translationally acetylated protein lysine residue to coenzyme A (CoA), yielding acetyl-CoA and regenerating the free amine on the lysine. This activity was validated by in vitro biochemical assays with recombinant human ABHD14B and by cellular knockdown experiments. A putative substrate binding site was also identified. In vitro biochemical assay with recombinant protein, mammalian cell knockdown, active-site analysis Biochemistry High 31478652
2022 Loss of ABHD14B in mammalian cells results in significantly decreased flux of glucose through glycolysis and the citric acid cycle, as determined by combined transcriptomics and metabolomics. Hepatic depletion of ABHD14B in mice additionally causes defective systemic glucose metabolism, particularly during fasting, establishing ABHD14B as a regulator of glucose metabolism in vivo. siRNA knockdown in mammalian cells combined with transcriptomics and metabolomics; hepatic ABHD14B depletion in mice with metabolic phenotyping The Journal of biological chemistry High 35700823
2023 Bioinformatics coupled with biochemical experiments identified key sequence determinants that distinguish ABHD14B from the closely related ABHD14A, enabling correct classification of each enzyme. The study mapped both enzymes on an evolutionary timescale and showed that despite high sequence similarity, ABHD14B has KDAC activity while ABHD14A remains functionally unannotated. Bioinformatics sequence analysis combined with biochemical experiments Proteins Medium 37974539
2025 ABHD14B was identified as a host protein that interacts with hepatitis B virus covalently closed circular DNA (cccDNA) via TFII-I, a protein that binds cccDNA in a sequence-dependent manner. ABHD14B decreases acetylation levels of histone proteins associated with cccDNA, thereby inhibiting HBV RNA transcription from cccDNA. Knockout of ABHD14B confirmed its suppressor role in HBV transcription. CRISPR-based proximity labeling (dCas9-BioID2) to identify cccDNA-interacting proteins; gene knockout; HBV RNA transcription assay; histone acetylation measurement Hepatology communications Medium 40658808
2019 ABHD14B was originally identified as associated with the transcription initiation factor TFIID (CCG1/TAFII250-interacting factor B), and its crystal structure was determined, though its endogenous substrates remained elusive prior to the KDAC annotation in this same paper. Crystal structure determination (prior to this paper); co-purification with TFIID reported in prior literature as noted in abstract Biochemistry Low 31478652

Source papers

Stage 0 corpus · 15 papers · ranked by NIH iCite citations
Year Title Journal Citations PMID
2019 Tumor expression of environmental chemical-responsive genes and breast cancer mortality. Endocrine-related cancer 19 31593922
2022 A multi-omics analysis reveals that the lysine deacetylase ABHD14B influences glucose metabolism in mammals. The Journal of biological chemistry 17 35700823
2019 Functional Annotation of ABHD14B, an Orphan Serine Hydrolase Enzyme. Biochemistry 17 31478652
2023 In-depth proteomic signature of parathyroid carcinoma. European journal of endocrinology 10 36995894
2018 Effect of biphenyl hydrolase-like (BPHL) gene disruption on the intestinal stability, permeability and absorption of valacyclovir in wildtype and Bphl knockout mice. Biochemical pharmacology 6 30121252
2024 Effects of Continuous Prenatal Low Dose Rate Irradiation on Neurobehavior, Hippocampal Cellularity, Messenger RNA and MicroRNA Expression on B6C3F1 Mice. Cells 5 39272995
2024 Epigenome-wide association study identifies DNA methylation loci associated with handgrip strength in Chinese monozygotic twins. Frontiers in cell and developmental biology 4 38633108
2020 Activity-based protein profiling guided identification of urine proteinase 3 activity in subclinical rejection after renal transplantation. Clinical proteomics 4 32549867
2025 Spontaneous brain activity in patients with type 2 diabetes: linking serum neuroproteins to cognitive ability. Diabetology & metabolic syndrome 2 40426217
2023 Identification of sequence determinants for the ABHD14 enzymes. Proteins 2 37974539
2025 CRISPR-mediated proximity labeling unveils ABHD14B as a host factor to regulate HBV cccDNA transcriptional activity. Hepatology communications 1 40658808
2026 Genome-wide DNA methylation profiles and ribosomal DNA copy number at birth. Epigenetics 0 41774615
2025 Mediators of the causal associations between protein ratios and ischemic stroke: a two-step Mendelian randomization study. Neurological research 0 40181221
2025 Exploring Novel Biomarkers for Rosacea Through Cohort Study and Mendelian Randomisation. Experimental dermatology 0 40890957
2025 GCHFR-gut microbiota axis in gout: an integrative multi-omics and Mendelian randomization study with clinical and molecular validation. International immunopharmacology 0 41422660

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