{"gene":"PAQR7","run_date":"2026-06-10T05:19:53","timeline":{"discoveries":[{"year":2018,"finding":"PAQR7 (mPRα) mediates rapid progesterone-induced relaxation of human umbilical vein vascular smooth muscle cells (VSMCs) through Gi protein coupling, leading to decreased cAMP, activation of MAP kinase/ERK and Akt/PI3K pathways, and reduced myosin light chain phosphorylation. These effects were blocked by pertussis toxin, mPRα siRNA knockdown, and pathway-specific inhibitors, but not by nuclear PR agonist R5020 or nPR siRNA.","method":"Collagen gel disk contraction assay, endothelium-denuded artery ring tension assay, siRNA knockdown, pertussis toxin treatment, pharmacological inhibitors (AZD6244, wortmannin, 8-Br-cAMP)","journal":"Molecular and cellular endocrinology","confidence":"High","confidence_rationale":"Tier 2 / Strong — multiple orthogonal functional assays (two contraction assays), reciprocal siRNA knockdown of mPRα vs nPR, pathway inhibitors, selective agonist 02-0; replicated across assays in single rigorous study","pmids":["29428395"],"is_preprint":false},{"year":2019,"finding":"mPRα (PAQR7) mediates progesterone-induced decrease in cytosolic Ca2+ in human umbilical artery VSMCs via Gi protein activation, downregulation of cAMP, inhibition of MAPK/Akt signaling, and decreased RhoA/ROCK activity. Knockdown of mPRα (but not nuclear PR) abolished these effects; pertussis toxin, 8-Br-cAMP, MAPK inhibitor PD98059, and Akt inhibitor ML-9 all blocked progesterone-induced Ca2+ decrease and VSMC relaxation.","method":"Intracellular Ca2+ measurement, siRNA knockdown, pertussis toxin treatment, pharmacological inhibitors, RhoA activity assay","journal":"Journal of molecular endocrinology","confidence":"High","confidence_rationale":"Tier 2 / Strong — multiple orthogonal methods (Ca2+ imaging, RhoA assay, selective agonist, siRNA knockdown vs nPR knockdown), consistent mechanistic pathway delineation in single rigorous study","pmids":["31416049"],"is_preprint":false},{"year":2021,"finding":"mPRα (PAQR7)-mediated progesterone signaling in VSMCs involves upregulation of SERCA2 protein expression and phospholamban (PLB) phosphorylation (disinhibiting SERCA), leading to increased Ca2+ uptake into the SR and VSMC relaxation. These effects required Gi, MAP kinase, Akt/PI3K signaling, and RhoA downregulation; SERCA2 siRNA knockdown or CPA (SERCA inhibitor) blocked progesterone-induced relaxation.","method":"SERCA2 siRNA knockdown, pharmacological inhibitors (CPA, NF023, AZD6244, wortmannin, calpeptin), SR Ca2+ measurement, immunoblotting for PLB phosphorylation","journal":"American journal of physiology. Endocrinology and metabolism","confidence":"High","confidence_rationale":"Tier 2 / Strong — siRNA knockdown of SERCA2, multiple pharmacological inhibitors, direct Ca2+ measurements, mPRα-selective agonist used throughout; multiple orthogonal methods in one rigorous study","pmids":["33427050"],"is_preprint":false},{"year":2022,"finding":"Homology modeling of mPRα (PAQR7) based on AdipoR1 crystal structure revealed: (1) intracellular N-terminus membrane orientation; (2) a zinc-binding pocket homologous to AdipoRs; (3) a critical H-bond between Q206 and the 20-carbonyl of progesterone. Mutational analysis showed complete loss of [3H]-progesterone binding in Q206R and V146S mutants. High Zn2+ concentrations restored progesterone binding in Q206R mutant, consistent with competitive displacement of oleic acid from the binding pocket. AdipoRon bound mPRα and mimicked progesterone signaling; D-e-MAPP blocked progesterone signaling.","method":"Homology modeling (AdipoR1 X-ray as template), site-directed mutagenesis, [3H]-progesterone radioligand binding assay, pharmacological assays","journal":"The Journal of steroid biochemistry and molecular biology","confidence":"Medium","confidence_rationale":"Tier 1–2 / Moderate — mutagenesis plus radioligand binding assay validates model predictions; homology model (not direct structure), single lab","pmids":["35189329"],"is_preprint":false},{"year":2022,"finding":"A steroid binding assay using graphene quantum dot-conjugated mPRα (GQD-mPRα) demonstrated direct ligand-receptor binding between mPRα and progesterone-BSA-FITC, with competition by free progesterone, confirming mPRα has a functional progesterone binding site.","method":"Fluorescence-based competitive binding assay using GQD-conjugated mPRα protein and progesterone-BSA-FITC","journal":"Biochemical and biophysical research communications","confidence":"Medium","confidence_rationale":"Tier 2 / Weak — direct in vitro binding assay with competition, but single method, single lab","pmids":["35007844"],"is_preprint":false},{"year":2023,"finding":"mPRα (PAQR7) mediates neuroprotective effects of progesterone against 6-OHDA and MPP+ toxicity in SH-SY5Y cells (Parkinson's disease model). The mPR-selective agonist Org OD 02-0 was effective while nuclear PR agonist R5020 and GABAA agonist muscimol were not. mPRα siRNA knockdown abolished neuroprotection. PI3K-AKT and MAP kinase signaling pathways are involved in mPRα-mediated neuroprotection.","method":"siRNA knockdown of mPRα isoforms, selective pharmacological agonists (Org OD 02-0 vs R5020 vs muscimol), cell viability assays, pathway inhibitors","journal":"Frontiers in endocrinology","confidence":"Medium","confidence_rationale":"Tier 2 / Moderate — siRNA knockdown combined with selective agonists and pathway inhibitors; single lab, multiple orthogonal approaches","pmids":["36967764"],"is_preprint":false},{"year":2021,"finding":"mPRα (PAQR7) activation in Schwann cell-like adipose stem cells (SCL-ASC) promotes cell migration, differentiation, morphology changes, and BDNF release. mPRα localization changed upon activation. Src and PI3K-Akt signaling pathways are required for mPRα activity in SCL-ASC. mPRα siRNA confirmed this isoform is responsible.","method":"siRNA knockdown of mPRα, selective mPR agonist Org OD 02-0, cell migration assays, BDNF ELISA, pathway inhibitors, immunofluorescence for localization","journal":"Molecular and cellular endocrinology","confidence":"Medium","confidence_rationale":"Tier 2 / Moderate — siRNA knockdown, selective agonist, multiple functional readouts, subcellular localization; single lab","pmids":["33930460"],"is_preprint":false},{"year":2022,"finding":"mPRα (PAQR7) activation in Schwann cell-like adipose stem cells (SCL-ASC) promotes neurite outgrowth in co-cultured neuronal cells (IMR-32 and SH-SY5Y) through SCL-ASC-dependent release of BDNF and IGF-2, while direct mPRα activation on neuronal cells promotes cell survival. mPRα siRNA in SCL-ASC abolished the neurite outgrowth effect.","method":"Conditioned medium experiments, co-culture, siRNA knockdown of mPRα in SCL-ASC, selective agonist Org OD 02-0, BDNF/IGF-2 measurements","journal":"Journal of molecular neuroscience : MN","confidence":"Medium","confidence_rationale":"Tier 2 / Moderate — siRNA knockdown, conditioned medium, co-culture, and direct agonist approaches; single lab, multiple orthogonal methods","pmids":["35974286"],"is_preprint":false},{"year":2024,"finding":"PAQR7 deficiency in KGN granulosa cells increased apoptosis, which was rescued by P4 supplementation. Paqr7 knockout female mice showed prolonged estrous cycles, reduced follicular growth, increased atresia follicles, decreased E2 and AMH, reduced litter sizes, and impaired spontaneous ovulation. The anti-apoptotic mechanism involves the BCL-2/BAX/CASPASE-3 signaling pathway.","method":"siPAQR7 knockdown in KGN cells, Paqr7 knockout mouse model, follicle counting, hormone measurements, apoptosis assays, western blot for BCL-2/BAX/CASPASE-3","journal":"Journal of ovarian research","confidence":"Medium","confidence_rationale":"Tier 2 / Moderate — KO mouse model plus cell-based siRNA knockdown, multiple reproductive phenotype readouts, pathway analysis; single lab","pmids":["38317224"],"is_preprint":false},{"year":2016,"finding":"A Paqr7 structural homolog (Paqr7b) in half-smooth tongue sole fish ovary is required for progestin-induced oocyte maturation. Morpholino antisense knockdown of Paqr7b in oocytes blocked progestin-induced maturation. Paqr7b expression in oocytes and pituitary was regulated by gonadotropin in a dose- and stage-dependent manner.","method":"Morpholino antisense oligonucleotide microinjection in oocytes, in situ hybridization, immunohistochemistry, cDNA cloning and phylogenetic analysis","journal":"General and comparative endocrinology","confidence":"Medium","confidence_rationale":"Tier 2 / Moderate — morpholino knockdown with direct functional readout (oocyte maturation); fish ortholog/paralog, single lab","pmids":["27554928"],"is_preprint":false},{"year":2025,"finding":"2-Hydroxypentanoic acid (2-HPA) from marine algae Padina shows competitive binding to human mPRα (PAQR7) in a GQD-mPRα binding assay and inhibits fish oocyte maturation and ovulation in vivo. Both S- and R-stereoisomers showed equal activity. Structural analogues of 2-HPA lacked competitive binding, indicating structural specificity. 2-HPA acts as a novel mPRα antagonist.","method":"GQD-mPRα competitive binding assay, goldfish oocyte maturation assay in vitro, zebrafish ovulation assay in vivo","journal":"Biochemical and biophysical research communications","confidence":"Low","confidence_rationale":"Tier 3 / Weak — binding assay plus functional assay in fish model; novel finding but single lab, single paper","pmids":["39922053"],"is_preprint":false},{"year":2004,"finding":"PGLP (an alias for PAQR7) was identified as a PPARgamma1-target gene encoding a 38 kDa cytoplasmic membranous protein that is dramatically induced in mouse liver following PPARgamma1 overexpression (adenoviral approach) but not by fasting or choline deficiency-induced fatty liver. Full-length cDNA was cloned.","method":"Affymetrix microarray, adenoviral PPARgamma1 overexpression in PPARalpha-deficient mouse liver, cDNA cloning, northern blot","journal":"Biochimie","confidence":"Low","confidence_rationale":"Tier 3 / Weak — gene expression induction identified by microarray with validation; no mechanistic functional characterization of the PGLP/PAQR7 protein itself","pmids":["15589683"],"is_preprint":false}],"current_model":"PAQR7 (mPRα) is a 7-transmembrane membrane progesterone receptor with an intracellular N-terminus and a zinc-containing ligand-binding pocket (homologous to AdipoRs) where progesterone binds via a critical H-bond to Q206; upon progesterone binding, it couples to inhibitory G proteins (Gi) to decrease cAMP, activate MAP kinase/ERK and Akt/PI3K pathways, downregulate RhoA/ROCK and Ca2+ channel activity, upregulate SERCA2/phospholamban function, and reduce myosin light chain phosphorylation, collectively inducing vascular smooth muscle relaxation; in reproductive cells it mediates anti-apoptotic signaling through BCL-2/BAX/CASPASE-3, in neural/Schwann cells it promotes survival, migration, and BDNF/IGF-2 release via Src and PI3K-Akt, and in granulosa cells it supports ovarian follicle development and oocyte maturation."},"narrative":{"mechanistic_narrative":"PAQR7 (mPRα) is a membrane progesterone receptor that transduces rapid, non-genomic progesterone signaling through inhibitory G protein (Gi) coupling, with prominent roles in vascular smooth muscle relaxation, neural cell survival, and ovarian follicle development [PMID:29428395, PMID:36967764, PMID:38317224]. In human vascular smooth muscle cells, progesterone acting through mPRα—but not the nuclear progesterone receptor—couples to Gi to lower cAMP, activate MAP kinase/ERK and Akt/PI3K signaling, and reduce myosin light chain phosphorylation, producing relaxation [PMID:29428395]. This pathway lowers cytosolic Ca2+ by downregulating RhoA/ROCK activity [PMID:31416049] and by upregulating SERCA2 expression and phospholamban phosphorylation to drive Ca2+ uptake into the sarcoplasmic reticulum [PMID:33427050]. Ligand recognition occurs through a zinc-containing pocket modeled on the adiponectin receptors, in which a hydrogen bond between Q206 and the progesterone 20-carbonyl is essential for binding; mutation of Q206 or V146 abolishes progesterone binding, and the AdipoR agonist AdipoRon mimics progesterone signaling at the receptor [PMID:35189329, PMID:35007844]. Beyond the vasculature, mPRα mediates progesterone neuroprotection in dopaminergic cell models via PI3K-AKT and MAP kinase pathways [PMID:36967764], drives Schwann cell-like adipose stem cell migration, differentiation, and BDNF/IGF-2 release through Src and PI3K-Akt signaling to support neurite outgrowth and neuronal survival [PMID:33930460, PMID:35974286], and protects granulosa cells from apoptosis via BCL-2/BAX/CASPASE-3 signaling, with Paqr7 knockout mice showing impaired follicular growth, ovulation, and fertility [PMID:38317224].","teleology":[{"year":2004,"claim":"Before functional characterization, the question was whether PAQR7 (then PGLP) was a regulated gene of defined tissue context; it was placed downstream of PPARgamma1 as an inducible cytoplasmic membranous protein.","evidence":"Affymetrix microarray and adenoviral PPARgamma1 overexpression in mouse liver with cDNA cloning","pmids":["15589683"],"confidence":"Low","gaps":["No mechanistic function assigned to the protein","Link to progesterone signaling not yet established","Single transcriptional induction observation"]},{"year":2016,"claim":"To test whether PAQR-family membrane progesterone receptors are functionally required for reproduction, a tongue sole homolog was knocked down, establishing a role in progestin-induced oocyte maturation.","evidence":"Morpholino knockdown in fish oocytes with in situ hybridization and gonadotropin regulation analysis","pmids":["27554928"],"confidence":"Medium","gaps":["Fish ortholog/paralog, not human PAQR7","Downstream signaling pathway not delineated","Receptor-ligand binding not directly shown"]},{"year":2018,"claim":"The central question of how progesterone produces rapid vascular effects was answered by showing mPRα couples to Gi to relax vascular smooth muscle independently of the nuclear receptor.","evidence":"Collagen gel and artery ring contraction assays, reciprocal mPRα vs nPR siRNA knockdown, pertussis toxin, and pathway inhibitors in human VSMCs","pmids":["29428395"],"confidence":"High","gaps":["Direct receptor-G protein interaction not structurally resolved","In vivo vascular relevance not tested"]},{"year":2019,"claim":"Building on Gi coupling, the downstream effector arm was defined by showing mPRα lowers cytosolic Ca2+ through cAMP and MAPK/Akt downregulation and decreased RhoA/ROCK activity.","evidence":"Intracellular Ca2+ imaging, RhoA activity assay, siRNA knockdown, and pathway inhibitors in human umbilical artery VSMCs","pmids":["31416049"],"confidence":"High","gaps":["Connection between RhoA downregulation and Ca2+ handling not fully resolved","Membrane proximal events between receptor and RhoA unmapped"]},{"year":2021,"claim":"The Ca2+-lowering mechanism was mechanistically completed by identifying SERCA2 upregulation and phospholamban phosphorylation as the effectors driving SR Ca2+ uptake and relaxation.","evidence":"SERCA2 siRNA knockdown, SERCA inhibitor CPA, SR Ca2+ measurement, and immunoblotting for PLB phosphorylation","pmids":["33427050"],"confidence":"High","gaps":["Mechanism linking PI3K/Akt to PLB phosphorylation not defined","SERCA2 transcriptional vs post-translational induction not separated"]},{"year":2021,"claim":"To extend mPRα beyond vasculature, its activation in Schwann cell-like adipose stem cells was shown to promote migration, differentiation, and BDNF release via Src and PI3K-Akt.","evidence":"siRNA knockdown, selective agonist Org OD 02-0, migration assays, BDNF ELISA, and immunofluorescence localization","pmids":["33930460"],"confidence":"Medium","gaps":["Mechanism of agonist-induced relocalization unknown","Direct Src activation by the receptor not shown"]},{"year":2022,"claim":"The molecular basis of ligand recognition was addressed by homology modeling and mutagenesis, defining a zinc-containing pocket and an essential Q206 hydrogen bond to progesterone.","evidence":"AdipoR1-based homology model, site-directed mutagenesis (Q206R, V146S), [3H]-progesterone radioligand binding, and AdipoRon/D-e-MAPP pharmacology","pmids":["35189329"],"confidence":"Medium","gaps":["No experimental structure of PAQR7","Single lab; model-based predictions","Zinc stoichiometry and catalytic relevance not established"]},{"year":2022,"claim":"Direct ligand binding was independently confirmed using a graphene quantum dot-conjugated receptor assay showing competitive progesterone binding.","evidence":"Fluorescence-based competitive binding with GQD-mPRα and progesterone-BSA-FITC","pmids":["35007844"],"confidence":"Medium","gaps":["Single method, single lab","Binding affinity and kinetics not quantified"]},{"year":2022,"claim":"The neural role was broadened by showing mPRα-activated SCL-ASCs promote neurite outgrowth in neurons via secreted BDNF and IGF-2, while direct neuronal mPRα activation promotes survival.","evidence":"Conditioned medium, co-culture, siRNA knockdown in SCL-ASC, selective agonist, and BDNF/IGF-2 measurement","pmids":["35974286"],"confidence":"Medium","gaps":["Paracrine vs direct contributions in vivo unquantified","Signaling linking mPRα to BDNF/IGF-2 secretion not mapped"]},{"year":2023,"claim":"Whether mPRα mediates progesterone neuroprotection was tested in a Parkinson's disease cell model, showing selective mPR agonism protects against neurotoxins via PI3K-AKT and MAP kinase.","evidence":"siRNA knockdown, selective agonist Org OD 02-0 vs R5020 vs muscimol, viability assays, and pathway inhibitors in SH-SY5Y cells","pmids":["36967764"],"confidence":"Medium","gaps":["No in vivo neuroprotection demonstrated","Downstream survival effectors not identified"]},{"year":2024,"claim":"The reproductive requirement for PAQR7 in mammals was established, linking its anti-apoptotic BCL-2/BAX/CASPASE-3 signaling to follicle development and fertility.","evidence":"siPAQR7 in KGN granulosa cells with P4 rescue, Paqr7 knockout mice, follicle counts, hormone measurements, and apoptosis pathway western blots","pmids":["38317224"],"confidence":"Medium","gaps":["Coupling between receptor and BCL-2/BAX regulation not delineated","Single lab; granulosa-specific vs systemic contributions not separated"]},{"year":2025,"claim":"Pharmacological tractability of the ligand pocket was probed by identifying 2-HPA as a competitive natural antagonist with structural specificity.","evidence":"GQD-mPRα competitive binding assay, goldfish oocyte maturation, and zebrafish ovulation assays","pmids":["39922053"],"confidence":"Low","gaps":["Single lab, single paper","Antagonism validated in fish, not human cells","No structural confirmation of binding site engagement"]},{"year":null,"claim":"How mPRα physically engages Gi at the membrane and how a single receptor selects between vascular relaxation, neuroprotective, and anti-apoptotic outputs in different cell types remains unresolved.","evidence":"","pmids":[],"confidence":"Medium","gaps":["No experimental receptor structure or receptor-G protein complex","Cell-type-specific effector selection unexplained","In vivo vascular and neural functions largely untested"]}],"mechanism_profile":{"molecular_activity":[{"term_id":"GO:0060089","term_label":"molecular transducer activity","supporting_discovery_ids":[0,1]},{"term_id":"GO:0048018","term_label":"receptor ligand activity","supporting_discovery_ids":[3,4]}],"localization":[{"term_id":"GO:0005886","term_label":"plasma membrane","supporting_discovery_ids":[0,3]},{"term_id":"GO:0005829","term_label":"cytosol","supporting_discovery_ids":[11]}],"pathway":[{"term_id":"R-HSA-162582","term_label":"Signal Transduction","supporting_discovery_ids":[0,1,2]},{"term_id":"R-HSA-5357801","term_label":"Programmed Cell Death","supporting_discovery_ids":[8]},{"term_id":"R-HSA-1474165","term_label":"Reproduction","supporting_discovery_ids":[8,9]}],"complexes":[],"partners":[],"other_free_text":[]}},"prefetch_data":{"uniprot":{"accession":"Q86WK9","full_name":"Membrane progestin receptor alpha","aliases":["Membrane progesterone P4 receptor alpha","Membrane progesterone receptor alpha","Progesterone and adipoQ receptor family member 7","Progestin and adipoQ receptor family member 7","Progestin and adipoQ receptor family member VII"],"length_aa":346,"mass_kda":39.7,"function":"Plasma membrane progesterone (P4) receptor coupled to G proteins (PubMed:23763432). Seems to act through a G(i) mediated pathway (PubMed:23763432). May be involved in oocyte maturation (PubMed:12601167). Involved in neurosteroid inhibition of apoptosis (PubMed:23161870). Also binds dehydroepiandrosterone (DHEA), pregnanolone, pregnenolone and allopregnanolone (PubMed:23161870)","subcellular_location":"Cell membrane","url":"https://www.uniprot.org/uniprotkb/Q86WK9/entry"},"depmap":{"release":"DepMap","has_data":true,"is_common_essential":false,"resolved_as":"","url":"https://depmap.org/portal/gene/PAQR7","classification":"Not Classified","n_dependent_lines":2,"n_total_lines":1208,"dependency_fraction":0.0016556291390728477},"opencell":{"profiled":false,"resolved_as":"","ensg_id":"","cell_line_id":"","localizations":[],"interactors":[{"gene":"CCDC47","stoichiometry":0.2}],"url":"https://opencell.sf.czbiohub.org/search/PAQR7","total_profiled":1310},"omim":[{"mim_id":"607779","title":"PROGESTIN AND ADIPOQ RECEPTOR FAMILY, MEMBER 7; PAQR7","url":"https://www.omim.org/entry/607779"}],"hpa":{"profiled":true,"resolved_as":"","reliability":"Approved","locations":[{"location":"Cytosol","reliability":"Approved"}],"tissue_specificity":"Tissue enhanced","tissue_distribution":"Detected in all","driving_tissues":[{"tissue":"testis","ntpm":60.1}],"url":"https://www.proteinatlas.org/search/PAQR7"},"hgnc":{"alias_symbol":["mSR","MPRA","PGLP"],"prev_symbol":[]},"alphafold":{"accession":"Q86WK9","domains":[{"cath_id":"-","chopping":"83-346","consensus_level":"high","plddt":93.027,"start":83,"end":346}],"viewer_url":"https://alphafold.ebi.ac.uk/entry/Q86WK9","model_url":"https://alphafold.ebi.ac.uk/files/AF-Q86WK9-F1-model_v6.cif","pae_url":"https://alphafold.ebi.ac.uk/files/AF-Q86WK9-F1-predicted_aligned_error_v6.png","plddt_mean":89.94},"mouse_models":{"mgi_url":"https://www.informatics.jax.org/marker/summary?nomen=PAQR7","jax_strain_url":"https://www.jax.org/strain/search?query=PAQR7"},"sequence":{"accession":"Q86WK9","fasta_url":"https://rest.uniprot.org/uniprotkb/Q86WK9.fasta","uniprot_url":"https://www.uniprot.org/uniprotkb/Q86WK9/entry","alphafold_viewer_url":"https://alphafold.ebi.ac.uk/entry/Q86WK9"}},"corpus_meta":[{"pmid":"35516490","id":"PMC_35516490","title":"Metabolic 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Cells.","date":"2022","source":"Journal of molecular neuroscience : MN","url":"https://pubmed.ncbi.nlm.nih.gov/35974286","citation_count":3,"is_preprint":false},{"pmid":"20606283","id":"PMC_20606283","title":"Crystallization and preliminary crystallographic analysis of the Magnetospirillum magneticum AMB-1 and M. gryphiswaldense MSR-1 magnetosome-associated proteins MamA.","date":"2010","source":"Acta crystallographica. Section F, Structural biology and crystallization communications","url":"https://pubmed.ncbi.nlm.nih.gov/20606283","citation_count":3,"is_preprint":false},{"pmid":"34974869","id":"PMC_34974869","title":"OxyR-Like Improves Cell Hydrogen Peroxide Tolerance by Participating in Monocyte Chemotaxis and Oxidative Phosphorylation Regulation in Magnetospirillum Gryphiswaldense MSR-1.","date":"2021","source":"Journal of biomedical nanotechnology","url":"https://pubmed.ncbi.nlm.nih.gov/34974869","citation_count":3,"is_preprint":false},{"pmid":"39922053","id":"PMC_39922053","title":"Discovery of specific activity of 2-hydroxypentanoic acid acting on the mPR alpha (Paqr7) from the marine algae Padina.","date":"2025","source":"Biochemical and biophysical research communications","url":"https://pubmed.ncbi.nlm.nih.gov/39922053","citation_count":3,"is_preprint":false},{"pmid":"39952712","id":"PMC_39952712","title":"Bioinformatics of simultaneous, quantitative measurements of full-length tRNA and tRNA fragments by MSR sequencing.","date":"2024","source":"Methods in enzymology","url":"https://pubmed.ncbi.nlm.nih.gov/39952712","citation_count":3,"is_preprint":false}],"cost":{"stage1":{"model":"claude-sonnet-4-6","input_tokens":55137,"output_tokens":3936,"usd":0.112226,"stage1_stop_reason":"end_turn"},"stage2":{"model":"claude-opus-4-8","input_tokens":11442,"output_tokens":3937,"usd":0.077817,"stage2_stop_reason":"end_turn"},"total_usd":0.190043,"stage1_batch_id":"msgbatch_013a8chtv3AWyTqv4z4sEF4C","stage2_batch_id":"msgbatch_01AHsuW63vinsvuTgzmQ3n62","note":"batch pricing = 50% of standard"},"stage1_raw":"Looking through the abstracts, I need to identify papers about PAQR7 (also known as mPRα, MPRA, PGLP) - the human membrane progesterone receptor alpha, a member of the progestin and adipoQ receptor family.\n\nPapers clearly about PAQR7/mPRα: [35], [38], [39], [41], [50], [54], [61], [65], [71], [79], [96], [99]\nPaper [31] mentions PGLP as an alias but describes it as a PPARgamma-induced gene with no mechanistic detail about PAQR7 function.\n\nThe other papers are about: Magnetospirillum MSR-1 bacteria, macrolide resistance msr genes, scavenger receptors (MSR-A/MSR-B), methionine sulfoxide reductases (MsrA/MsrB), MPRA (massively parallel reporter assay), etc. - all symbol collisions or unrelated topics.\n\n```json\n{\n  \"discoveries\": [\n    {\n      \"year\": 2018,\n      \"finding\": \"PAQR7 (mPRα) mediates rapid progesterone-induced relaxation of human umbilical vein vascular smooth muscle cells (VSMCs) through Gi protein coupling, leading to decreased cAMP, activation of MAP kinase/ERK and Akt/PI3K pathways, and reduced myosin light chain phosphorylation. These effects were blocked by pertussis toxin, mPRα siRNA knockdown, and pathway-specific inhibitors, but not by nuclear PR agonist R5020 or nPR siRNA.\",\n      \"method\": \"Collagen gel disk contraction assay, endothelium-denuded artery ring tension assay, siRNA knockdown, pertussis toxin treatment, pharmacological inhibitors (AZD6244, wortmannin, 8-Br-cAMP)\",\n      \"journal\": \"Molecular and cellular endocrinology\",\n      \"confidence\": \"High\",\n      \"confidence_rationale\": \"Tier 2 / Strong — multiple orthogonal functional assays (two contraction assays), reciprocal siRNA knockdown of mPRα vs nPR, pathway inhibitors, selective agonist 02-0; replicated across assays in single rigorous study\",\n      \"pmids\": [\"29428395\"],\n      \"is_preprint\": false\n    },\n    {\n      \"year\": 2019,\n      \"finding\": \"mPRα (PAQR7) mediates progesterone-induced decrease in cytosolic Ca2+ in human umbilical artery VSMCs via Gi protein activation, downregulation of cAMP, inhibition of MAPK/Akt signaling, and decreased RhoA/ROCK activity. Knockdown of mPRα (but not nuclear PR) abolished these effects; pertussis toxin, 8-Br-cAMP, MAPK inhibitor PD98059, and Akt inhibitor ML-9 all blocked progesterone-induced Ca2+ decrease and VSMC relaxation.\",\n      \"method\": \"Intracellular Ca2+ measurement, siRNA knockdown, pertussis toxin treatment, pharmacological inhibitors, RhoA activity assay\",\n      \"journal\": \"Journal of molecular endocrinology\",\n      \"confidence\": \"High\",\n      \"confidence_rationale\": \"Tier 2 / Strong — multiple orthogonal methods (Ca2+ imaging, RhoA assay, selective agonist, siRNA knockdown vs nPR knockdown), consistent mechanistic pathway delineation in single rigorous study\",\n      \"pmids\": [\"31416049\"],\n      \"is_preprint\": false\n    },\n    {\n      \"year\": 2021,\n      \"finding\": \"mPRα (PAQR7)-mediated progesterone signaling in VSMCs involves upregulation of SERCA2 protein expression and phospholamban (PLB) phosphorylation (disinhibiting SERCA), leading to increased Ca2+ uptake into the SR and VSMC relaxation. These effects required Gi, MAP kinase, Akt/PI3K signaling, and RhoA downregulation; SERCA2 siRNA knockdown or CPA (SERCA inhibitor) blocked progesterone-induced relaxation.\",\n      \"method\": \"SERCA2 siRNA knockdown, pharmacological inhibitors (CPA, NF023, AZD6244, wortmannin, calpeptin), SR Ca2+ measurement, immunoblotting for PLB phosphorylation\",\n      \"journal\": \"American journal of physiology. Endocrinology and metabolism\",\n      \"confidence\": \"High\",\n      \"confidence_rationale\": \"Tier 2 / Strong — siRNA knockdown of SERCA2, multiple pharmacological inhibitors, direct Ca2+ measurements, mPRα-selective agonist used throughout; multiple orthogonal methods in one rigorous study\",\n      \"pmids\": [\"33427050\"],\n      \"is_preprint\": false\n    },\n    {\n      \"year\": 2022,\n      \"finding\": \"Homology modeling of mPRα (PAQR7) based on AdipoR1 crystal structure revealed: (1) intracellular N-terminus membrane orientation; (2) a zinc-binding pocket homologous to AdipoRs; (3) a critical H-bond between Q206 and the 20-carbonyl of progesterone. Mutational analysis showed complete loss of [3H]-progesterone binding in Q206R and V146S mutants. High Zn2+ concentrations restored progesterone binding in Q206R mutant, consistent with competitive displacement of oleic acid from the binding pocket. AdipoRon bound mPRα and mimicked progesterone signaling; D-e-MAPP blocked progesterone signaling.\",\n      \"method\": \"Homology modeling (AdipoR1 X-ray as template), site-directed mutagenesis, [3H]-progesterone radioligand binding assay, pharmacological assays\",\n      \"journal\": \"The Journal of steroid biochemistry and molecular biology\",\n      \"confidence\": \"Medium\",\n      \"confidence_rationale\": \"Tier 1–2 / Moderate — mutagenesis plus radioligand binding assay validates model predictions; homology model (not direct structure), single lab\",\n      \"pmids\": [\"35189329\"],\n      \"is_preprint\": false\n    },\n    {\n      \"year\": 2022,\n      \"finding\": \"A steroid binding assay using graphene quantum dot-conjugated mPRα (GQD-mPRα) demonstrated direct ligand-receptor binding between mPRα and progesterone-BSA-FITC, with competition by free progesterone, confirming mPRα has a functional progesterone binding site.\",\n      \"method\": \"Fluorescence-based competitive binding assay using GQD-conjugated mPRα protein and progesterone-BSA-FITC\",\n      \"journal\": \"Biochemical and biophysical research communications\",\n      \"confidence\": \"Medium\",\n      \"confidence_rationale\": \"Tier 2 / Weak — direct in vitro binding assay with competition, but single method, single lab\",\n      \"pmids\": [\"35007844\"],\n      \"is_preprint\": false\n    },\n    {\n      \"year\": 2023,\n      \"finding\": \"mPRα (PAQR7) mediates neuroprotective effects of progesterone against 6-OHDA and MPP+ toxicity in SH-SY5Y cells (Parkinson's disease model). The mPR-selective agonist Org OD 02-0 was effective while nuclear PR agonist R5020 and GABAA agonist muscimol were not. mPRα siRNA knockdown abolished neuroprotection. PI3K-AKT and MAP kinase signaling pathways are involved in mPRα-mediated neuroprotection.\",\n      \"method\": \"siRNA knockdown of mPRα isoforms, selective pharmacological agonists (Org OD 02-0 vs R5020 vs muscimol), cell viability assays, pathway inhibitors\",\n      \"journal\": \"Frontiers in endocrinology\",\n      \"confidence\": \"Medium\",\n      \"confidence_rationale\": \"Tier 2 / Moderate — siRNA knockdown combined with selective agonists and pathway inhibitors; single lab, multiple orthogonal approaches\",\n      \"pmids\": [\"36967764\"],\n      \"is_preprint\": false\n    },\n    {\n      \"year\": 2021,\n      \"finding\": \"mPRα (PAQR7) activation in Schwann cell-like adipose stem cells (SCL-ASC) promotes cell migration, differentiation, morphology changes, and BDNF release. mPRα localization changed upon activation. Src and PI3K-Akt signaling pathways are required for mPRα activity in SCL-ASC. mPRα siRNA confirmed this isoform is responsible.\",\n      \"method\": \"siRNA knockdown of mPRα, selective mPR agonist Org OD 02-0, cell migration assays, BDNF ELISA, pathway inhibitors, immunofluorescence for localization\",\n      \"journal\": \"Molecular and cellular endocrinology\",\n      \"confidence\": \"Medium\",\n      \"confidence_rationale\": \"Tier 2 / Moderate — siRNA knockdown, selective agonist, multiple functional readouts, subcellular localization; single lab\",\n      \"pmids\": [\"33930460\"],\n      \"is_preprint\": false\n    },\n    {\n      \"year\": 2022,\n      \"finding\": \"mPRα (PAQR7) activation in Schwann cell-like adipose stem cells (SCL-ASC) promotes neurite outgrowth in co-cultured neuronal cells (IMR-32 and SH-SY5Y) through SCL-ASC-dependent release of BDNF and IGF-2, while direct mPRα activation on neuronal cells promotes cell survival. mPRα siRNA in SCL-ASC abolished the neurite outgrowth effect.\",\n      \"method\": \"Conditioned medium experiments, co-culture, siRNA knockdown of mPRα in SCL-ASC, selective agonist Org OD 02-0, BDNF/IGF-2 measurements\",\n      \"journal\": \"Journal of molecular neuroscience : MN\",\n      \"confidence\": \"Medium\",\n      \"confidence_rationale\": \"Tier 2 / Moderate — siRNA knockdown, conditioned medium, co-culture, and direct agonist approaches; single lab, multiple orthogonal methods\",\n      \"pmids\": [\"35974286\"],\n      \"is_preprint\": false\n    },\n    {\n      \"year\": 2024,\n      \"finding\": \"PAQR7 deficiency in KGN granulosa cells increased apoptosis, which was rescued by P4 supplementation. Paqr7 knockout female mice showed prolonged estrous cycles, reduced follicular growth, increased atresia follicles, decreased E2 and AMH, reduced litter sizes, and impaired spontaneous ovulation. The anti-apoptotic mechanism involves the BCL-2/BAX/CASPASE-3 signaling pathway.\",\n      \"method\": \"siPAQR7 knockdown in KGN cells, Paqr7 knockout mouse model, follicle counting, hormone measurements, apoptosis assays, western blot for BCL-2/BAX/CASPASE-3\",\n      \"journal\": \"Journal of ovarian research\",\n      \"confidence\": \"Medium\",\n      \"confidence_rationale\": \"Tier 2 / Moderate — KO mouse model plus cell-based siRNA knockdown, multiple reproductive phenotype readouts, pathway analysis; single lab\",\n      \"pmids\": [\"38317224\"],\n      \"is_preprint\": false\n    },\n    {\n      \"year\": 2016,\n      \"finding\": \"A Paqr7 structural homolog (Paqr7b) in half-smooth tongue sole fish ovary is required for progestin-induced oocyte maturation. Morpholino antisense knockdown of Paqr7b in oocytes blocked progestin-induced maturation. Paqr7b expression in oocytes and pituitary was regulated by gonadotropin in a dose- and stage-dependent manner.\",\n      \"method\": \"Morpholino antisense oligonucleotide microinjection in oocytes, in situ hybridization, immunohistochemistry, cDNA cloning and phylogenetic analysis\",\n      \"journal\": \"General and comparative endocrinology\",\n      \"confidence\": \"Medium\",\n      \"confidence_rationale\": \"Tier 2 / Moderate — morpholino knockdown with direct functional readout (oocyte maturation); fish ortholog/paralog, single lab\",\n      \"pmids\": [\"27554928\"],\n      \"is_preprint\": false\n    },\n    {\n      \"year\": 2025,\n      \"finding\": \"2-Hydroxypentanoic acid (2-HPA) from marine algae Padina shows competitive binding to human mPRα (PAQR7) in a GQD-mPRα binding assay and inhibits fish oocyte maturation and ovulation in vivo. Both S- and R-stereoisomers showed equal activity. Structural analogues of 2-HPA lacked competitive binding, indicating structural specificity. 2-HPA acts as a novel mPRα antagonist.\",\n      \"method\": \"GQD-mPRα competitive binding assay, goldfish oocyte maturation assay in vitro, zebrafish ovulation assay in vivo\",\n      \"journal\": \"Biochemical and biophysical research communications\",\n      \"confidence\": \"Low\",\n      \"confidence_rationale\": \"Tier 3 / Weak — binding assay plus functional assay in fish model; novel finding but single lab, single paper\",\n      \"pmids\": [\"39922053\"],\n      \"is_preprint\": false\n    },\n    {\n      \"year\": 2004,\n      \"finding\": \"PGLP (an alias for PAQR7) was identified as a PPARgamma1-target gene encoding a 38 kDa cytoplasmic membranous protein that is dramatically induced in mouse liver following PPARgamma1 overexpression (adenoviral approach) but not by fasting or choline deficiency-induced fatty liver. Full-length cDNA was cloned.\",\n      \"method\": \"Affymetrix microarray, adenoviral PPARgamma1 overexpression in PPARalpha-deficient mouse liver, cDNA cloning, northern blot\",\n      \"journal\": \"Biochimie\",\n      \"confidence\": \"Low\",\n      \"confidence_rationale\": \"Tier 3 / Weak — gene expression induction identified by microarray with validation; no mechanistic functional characterization of the PGLP/PAQR7 protein itself\",\n      \"pmids\": [\"15589683\"],\n      \"is_preprint\": false\n    }\n  ],\n  \"current_model\": \"PAQR7 (mPRα) is a 7-transmembrane membrane progesterone receptor with an intracellular N-terminus and a zinc-containing ligand-binding pocket (homologous to AdipoRs) where progesterone binds via a critical H-bond to Q206; upon progesterone binding, it couples to inhibitory G proteins (Gi) to decrease cAMP, activate MAP kinase/ERK and Akt/PI3K pathways, downregulate RhoA/ROCK and Ca2+ channel activity, upregulate SERCA2/phospholamban function, and reduce myosin light chain phosphorylation, collectively inducing vascular smooth muscle relaxation; in reproductive cells it mediates anti-apoptotic signaling through BCL-2/BAX/CASPASE-3, in neural/Schwann cells it promotes survival, migration, and BDNF/IGF-2 release via Src and PI3K-Akt, and in granulosa cells it supports ovarian follicle development and oocyte maturation.\"\n}\n```","stage2_raw":"{\n  \"mechanistic_narrative\": \"PAQR7 (mPRα) is a membrane progesterone receptor that transduces rapid, non-genomic progesterone signaling through inhibitory G protein (Gi) coupling, with prominent roles in vascular smooth muscle relaxation, neural cell survival, and ovarian follicle development [#0, #5, #8]. In human vascular smooth muscle cells, progesterone acting through mPRα—but not the nuclear progesterone receptor—couples to Gi to lower cAMP, activate MAP kinase/ERK and Akt/PI3K signaling, and reduce myosin light chain phosphorylation, producing relaxation [#0]. This pathway lowers cytosolic Ca2+ by downregulating RhoA/ROCK activity [#1] and by upregulating SERCA2 expression and phospholamban phosphorylation to drive Ca2+ uptake into the sarcoplasmic reticulum [#2]. Ligand recognition occurs through a zinc-containing pocket modeled on the adiponectin receptors, in which a hydrogen bond between Q206 and the progesterone 20-carbonyl is essential for binding; mutation of Q206 or V146 abolishes progesterone binding, and the AdipoR agonist AdipoRon mimics progesterone signaling at the receptor [#3, #4]. Beyond the vasculature, mPRα mediates progesterone neuroprotection in dopaminergic cell models via PI3K-AKT and MAP kinase pathways [#5], drives Schwann cell-like adipose stem cell migration, differentiation, and BDNF/IGF-2 release through Src and PI3K-Akt signaling to support neurite outgrowth and neuronal survival [#6, #7], and protects granulosa cells from apoptosis via BCL-2/BAX/CASPASE-3 signaling, with Paqr7 knockout mice showing impaired follicular growth, ovulation, and fertility [#8].\",\n  \"teleology\": [\n    {\n      \"year\": 2004,\n      \"claim\": \"Before functional characterization, the question was whether PAQR7 (then PGLP) was a regulated gene of defined tissue context; it was placed downstream of PPARgamma1 as an inducible cytoplasmic membranous protein.\",\n      \"evidence\": \"Affymetrix microarray and adenoviral PPARgamma1 overexpression in mouse liver with cDNA cloning\",\n      \"pmids\": [\"15589683\"],\n      \"confidence\": \"Low\",\n      \"gaps\": [\"No mechanistic function assigned to the protein\", \"Link to progesterone signaling not yet established\", \"Single transcriptional induction observation\"]\n    },\n    {\n      \"year\": 2016,\n      \"claim\": \"To test whether PAQR-family membrane progesterone receptors are functionally required for reproduction, a tongue sole homolog was knocked down, establishing a role in progestin-induced oocyte maturation.\",\n      \"evidence\": \"Morpholino knockdown in fish oocytes with in situ hybridization and gonadotropin regulation analysis\",\n      \"pmids\": [\"27554928\"],\n      \"confidence\": \"Medium\",\n      \"gaps\": [\"Fish ortholog/paralog, not human PAQR7\", \"Downstream signaling pathway not delineated\", \"Receptor-ligand binding not directly shown\"]\n    },\n    {\n      \"year\": 2018,\n      \"claim\": \"The central question of how progesterone produces rapid vascular effects was answered by showing mPRα couples to Gi to relax vascular smooth muscle independently of the nuclear receptor.\",\n      \"evidence\": \"Collagen gel and artery ring contraction assays, reciprocal mPRα vs nPR siRNA knockdown, pertussis toxin, and pathway inhibitors in human VSMCs\",\n      \"pmids\": [\"29428395\"],\n      \"confidence\": \"High\",\n      \"gaps\": [\"Direct receptor-G protein interaction not structurally resolved\", \"In vivo vascular relevance not tested\"]\n    },\n    {\n      \"year\": 2019,\n      \"claim\": \"Building on Gi coupling, the downstream effector arm was defined by showing mPRα lowers cytosolic Ca2+ through cAMP and MAPK/Akt downregulation and decreased RhoA/ROCK activity.\",\n      \"evidence\": \"Intracellular Ca2+ imaging, RhoA activity assay, siRNA knockdown, and pathway inhibitors in human umbilical artery VSMCs\",\n      \"pmids\": [\"31416049\"],\n      \"confidence\": \"High\",\n      \"gaps\": [\"Connection between RhoA downregulation and Ca2+ handling not fully resolved\", \"Membrane proximal events between receptor and RhoA unmapped\"]\n    },\n    {\n      \"year\": 2021,\n      \"claim\": \"The Ca2+-lowering mechanism was mechanistically completed by identifying SERCA2 upregulation and phospholamban phosphorylation as the effectors driving SR Ca2+ uptake and relaxation.\",\n      \"evidence\": \"SERCA2 siRNA knockdown, SERCA inhibitor CPA, SR Ca2+ measurement, and immunoblotting for PLB phosphorylation\",\n      \"pmids\": [\"33427050\"],\n      \"confidence\": \"High\",\n      \"gaps\": [\"Mechanism linking PI3K/Akt to PLB phosphorylation not defined\", \"SERCA2 transcriptional vs post-translational induction not separated\"]\n    },\n    {\n      \"year\": 2021,\n      \"claim\": \"To extend mPRα beyond vasculature, its activation in Schwann cell-like adipose stem cells was shown to promote migration, differentiation, and BDNF release via Src and PI3K-Akt.\",\n      \"evidence\": \"siRNA knockdown, selective agonist Org OD 02-0, migration assays, BDNF ELISA, and immunofluorescence localization\",\n      \"pmids\": [\"33930460\"],\n      \"confidence\": \"Medium\",\n      \"gaps\": [\"Mechanism of agonist-induced relocalization unknown\", \"Direct Src activation by the receptor not shown\"]\n    },\n    {\n      \"year\": 2022,\n      \"claim\": \"The molecular basis of ligand recognition was addressed by homology modeling and mutagenesis, defining a zinc-containing pocket and an essential Q206 hydrogen bond to progesterone.\",\n      \"evidence\": \"AdipoR1-based homology model, site-directed mutagenesis (Q206R, V146S), [3H]-progesterone radioligand binding, and AdipoRon/D-e-MAPP pharmacology\",\n      \"pmids\": [\"35189329\"],\n      \"confidence\": \"Medium\",\n      \"gaps\": [\"No experimental structure of PAQR7\", \"Single lab; model-based predictions\", \"Zinc stoichiometry and catalytic relevance not established\"]\n    },\n    {\n      \"year\": 2022,\n      \"claim\": \"Direct ligand binding was independently confirmed using a graphene quantum dot-conjugated receptor assay showing competitive progesterone binding.\",\n      \"evidence\": \"Fluorescence-based competitive binding with GQD-mPRα and progesterone-BSA-FITC\",\n      \"pmids\": [\"35007844\"],\n      \"confidence\": \"Medium\",\n      \"gaps\": [\"Single method, single lab\", \"Binding affinity and kinetics not quantified\"]\n    },\n    {\n      \"year\": 2022,\n      \"claim\": \"The neural role was broadened by showing mPRα-activated SCL-ASCs promote neurite outgrowth in neurons via secreted BDNF and IGF-2, while direct neuronal mPRα activation promotes survival.\",\n      \"evidence\": \"Conditioned medium, co-culture, siRNA knockdown in SCL-ASC, selective agonist, and BDNF/IGF-2 measurement\",\n      \"pmids\": [\"35974286\"],\n      \"confidence\": \"Medium\",\n      \"gaps\": [\"Paracrine vs direct contributions in vivo unquantified\", \"Signaling linking mPRα to BDNF/IGF-2 secretion not mapped\"]\n    },\n    {\n      \"year\": 2023,\n      \"claim\": \"Whether mPRα mediates progesterone neuroprotection was tested in a Parkinson's disease cell model, showing selective mPR agonism protects against neurotoxins via PI3K-AKT and MAP kinase.\",\n      \"evidence\": \"siRNA knockdown, selective agonist Org OD 02-0 vs R5020 vs muscimol, viability assays, and pathway inhibitors in SH-SY5Y cells\",\n      \"pmids\": [\"36967764\"],\n      \"confidence\": \"Medium\",\n      \"gaps\": [\"No in vivo neuroprotection demonstrated\", \"Downstream survival effectors not identified\"]\n    },\n    {\n      \"year\": 2024,\n      \"claim\": \"The reproductive requirement for PAQR7 in mammals was established, linking its anti-apoptotic BCL-2/BAX/CASPASE-3 signaling to follicle development and fertility.\",\n      \"evidence\": \"siPAQR7 in KGN granulosa cells with P4 rescue, Paqr7 knockout mice, follicle counts, hormone measurements, and apoptosis pathway western blots\",\n      \"pmids\": [\"38317224\"],\n      \"confidence\": \"Medium\",\n      \"gaps\": [\"Coupling between receptor and BCL-2/BAX regulation not delineated\", \"Single lab; granulosa-specific vs systemic contributions not separated\"]\n    },\n    {\n      \"year\": 2025,\n      \"claim\": \"Pharmacological tractability of the ligand pocket was probed by identifying 2-HPA as a competitive natural antagonist with structural specificity.\",\n      \"evidence\": \"GQD-mPRα competitive binding assay, goldfish oocyte maturation, and zebrafish ovulation assays\",\n      \"pmids\": [\"39922053\"],\n      \"confidence\": \"Low\",\n      \"gaps\": [\"Single lab, single paper\", \"Antagonism validated in fish, not human cells\", \"No structural confirmation of binding site engagement\"]\n    },\n    {\n      \"year\": null,\n      \"claim\": \"How mPRα physically engages Gi at the membrane and how a single receptor selects between vascular relaxation, neuroprotective, and anti-apoptotic outputs in different cell types remains unresolved.\",\n      \"evidence\": \"\",\n      \"pmids\": [],\n      \"confidence\": \"Medium\",\n      \"gaps\": [\"No experimental receptor structure or receptor-G protein complex\", \"Cell-type-specific effector selection unexplained\", \"In vivo vascular and neural functions largely untested\"]\n    }\n  ],\n  \"mechanism_profile\": {\n    \"molecular_activity\": [\n      {\"term_id\": \"GO:0060089\", \"supporting_discovery_ids\": [0, 1]},\n      {\"term_id\": \"GO:0048018\", \"supporting_discovery_ids\": [3, 4]}\n    ],\n    \"localization\": [\n      {\"term_id\": \"GO:0005886\", \"supporting_discovery_ids\": [0, 3]},\n      {\"term_id\": \"GO:0005829\", \"supporting_discovery_ids\": [11]}\n    ],\n    \"pathway\": [\n      {\"term_id\": \"R-HSA-162582\", \"supporting_discovery_ids\": [0, 1, 2]},\n      {\"term_id\": \"R-HSA-5357801\", \"supporting_discovery_ids\": [8]},\n      {\"term_id\": \"R-HSA-1474165\", \"supporting_discovery_ids\": [8, 9]}\n    ],\n    \"complexes\": [],\n    \"partners\": [],\n    \"other_free_text\": []\n  }\n}","audit_flag":null,"evaluation":{"pairwise":"win","faith_supported":5,"faith_total":5,"faith_pct":100.0}}